RNA–Protein interactions for RNA: ENST00000419964.1

EPHA4-205, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 552 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-205ENST00000419964 MMRN1Q13201 1228 aa10.24□□□□□ -0.77
EPHA4-205ENST00000419964 PRDM9Q9NQV7 894 aa10.24□□□□□ -0.77
EPHA4-205ENST00000419964 TBC1D2BQ9UPU7 963 aa10.24□□□□□ -0.77
EPHA4-205ENST00000419964 KDM5DQ9BY66 1539 aa10.23□□□□□ -0.77
EPHA4-205ENST00000419964 KDM6BO15054 1643 aa10.23□□□□□ -0.77
EPHA4-205ENST00000419964 TRAK2O60296 914 aa10.23□□□□□ -0.77
EPHA4-205ENST00000419964 CCNYL3P0C7X3 344 aa10.23□□□□□ -0.77
EPHA4-205ENST00000419964 NR6A1Q15406 480 aa10.23□□□□□ -0.77
EPHA4-205ENST00000419964 NUDT12Q9BQG2 462 aa10.23□□□□□ -0.77
EPHA4-205ENST00000419964 KIF15Q9NS87 1388 aa10.23□□□□□ -0.77
EPHA4-205ENST00000419964 ABL2P42684 1182 aa10.22□□□□□ -0.77
EPHA4-205ENST00000419964 NKX2-3Q8TAU0 364 aa10.22□□□□□ -0.77
EPHA4-205ENST00000419964 SIN3AQ96ST3 1273 aa10.22□□□□□ -0.77
EPHA4-205ENST00000419964 SYCP2Q9BX26 1530 aa10.22□□□□□ -0.77
EPHA4-205ENST00000419964 ABCA9Q8IUA7 1624 aa10.22□□□□□ -0.77
EPHA4-205ENST00000419964 F12P00748 615 aaPredicted RBP10.21□□□□□ -0.77
EPHA4-205ENST00000419964 CTHP32929 405 aa10.21□□□□□ -0.77
EPHA4-205ENST00000419964 FNBP4Q8N3X1 1017 aaPredicted RBP10.21□□□□□ -0.77
EPHA4-205ENST00000419964 EPS8L1Q8TE68 723 aa10.21□□□□□ -0.77
EPHA4-205ENST00000419964 EVA1BQ9NVM1 165 aa10.21□□□□□ -0.77
EPHA4-205ENST00000419964 RTEL1-TNFRSF6BF6WH68 1400 aa10.21□□□□□ -0.78
EPHA4-205ENST00000419964 ABCC1P33527 1531 aa10.21□□□□□ -0.78
EPHA4-205ENST00000419964 HNRNPMP52272 730 aaKnown RBP eCLIP10.2□□□□□ -0.78
EPHA4-205ENST00000419964 RPRD2Q5VT52 1461 aaKnown RBP10.2□□□□□ -0.78
EPHA4-205ENST00000419964 ERBINQ96RT1 1412 aa10.2□□□□□ -0.78
EPHA4-205ENST00000419964 ANKRD30BQ9BXX2 1392 aa10.2□□□□□ -0.78
EPHA4-205ENST00000419964 CFAP74Q9C0B2 1584 aa10.2□□□□□ -0.78
EPHA4-205ENST00000419964 DUOX2Q9NRD8 1548 aa10.2□□□□□ -0.78
EPHA4-205ENST00000419964 S1PR4O95977 384 aa10.19□□□□□ -0.78
EPHA4-205ENST00000419964 KCNH2Q12809 1159 aa10.19□□□□□ -0.78
EPHA4-205ENST00000419964 MAP10Q9P2G4 905 aa10.19□□□□□ -0.78
EPHA4-205ENST00000419964 ZNF330Q9Y3S2 320 aaPredicted RBP10.19□□□□□ -0.78
EPHA4-205ENST00000419964 PZPP20742 1482 aa10.18□□□□□ -0.78
EPHA4-205ENST00000419964 ASXL2Q76L83 1435 aa10.18□□□□□ -0.78
EPHA4-205ENST00000419964 GGCXP38435 758 aa10.18□□□□□ -0.78
EPHA4-205ENST00000419964 CCDC24Q8N4L8 307 aa10.18□□□□□ -0.78
EPHA4-205ENST00000419964 DENND4BO75064 1496 aaPredicted RBP10.17□□□□□ -0.78
EPHA4-205ENST00000419964 NUP155O75694 1391 aa10.17□□□□□ -0.78
EPHA4-205ENST00000419964 WASHC4Q2M389 1173 aa10.17□□□□□ -0.78
EPHA4-205ENST00000419964 ARMC2Q8NEN0 867 aa10.17□□□□□ -0.78
EPHA4-205ENST00000419964 ZC3H4Q9UPT8 1303 aaKnown RBP10.16□□□□□ -0.78
EPHA4-205ENST00000419964 FKBPLQ9UIM3 349 aa10.16□□□□□ -0.78
EPHA4-205ENST00000419964 UNC13BO14795 1591 aa10.16□□□□□ -0.78
EPHA4-205ENST00000419964 FANCAO15360 1455 aa10.16□□□□□ -0.78
EPHA4-205ENST00000419964 FCF1Q9Y324 198 aaKnown RBP10.15□□□□□ -0.78
EPHA4-205ENST00000419964 CENPBP07199 599 aaPredicted RBP10.14□□□□□ -0.79
EPHA4-205ENST00000419964 IRF5Q13568 498 aa10.14□□□□□ -0.79
EPHA4-205ENST00000419964 SPAG9O60271 1321 aaKnown RBP10.13□□□□□ -0.79
EPHA4-205ENST00000419964 GPR37L1O60883 481 aa10.13□□□□□ -0.79
EPHA4-205ENST00000419964 GPKOWQ92917 476 aaPredicted RBP eCLIP10.13□□□□□ -0.79
EPHA4-205ENST00000419964 ARHGEF12Q9NZN5 1544 aa10.12□□□□□ -0.79
EPHA4-205ENST00000419964 FAM135AQ9P2D6 1515 aa10.12□□□□□ -0.79
EPHA4-205ENST00000419964 ADGRL1O94910 1474 aa10.12□□□□□ -0.79
EPHA4-205ENST00000419964 MAGI2Q86UL8 1455 aa10.12□□□□□ -0.79
EPHA4-205ENST00000419964 IQGAP3Q86VI3 1631 aa10.12□□□□□ -0.79
EPHA4-205ENST00000419964 NBPF14Q5TI25 921 aa10.12□□□□□ -0.79
EPHA4-205ENST00000419964 UNC93B1Q9H1C4 597 aa10.12□□□□□ -0.79
EPHA4-205ENST00000419964 ZNF518AQ6AHZ1 1483 aa10.11□□□□□ -0.79
EPHA4-205ENST00000419964 ANKLE1Q8NAG6 615 aa10.11□□□□□ -0.79
EPHA4-205ENST00000419964 ZFYVE16Q7Z3T8 1539 aa10.11□□□□□ -0.79
EPHA4-205ENST00000419964 EIF2AK4Q9P2K8 1649 aaKnown RBP10.11□□□□□ -0.79
EPHA4-205ENST00000419964 TEX14Q8IWB6 1497 aa10.1□□□□□ -0.79
EPHA4-205ENST00000419964 NEO1Q92859 1461 aa10.1□□□□□ -0.79
EPHA4-205ENST00000419964 INO80Q9ULG1 1556 aaPredicted RBP10.1□□□□□ -0.79
EPHA4-205ENST00000419964 RNF223E7ERA6 249 aa10.1□□□□□ -0.79
EPHA4-205ENST00000419964 EIF4G2P78344 907 aaKnown RBP eCLIP10.1□□□□□ -0.79
EPHA4-205ENST00000419964 IFFO2Q5TF58 517 aa10.1□□□□□ -0.79
EPHA4-205ENST00000419964 PTCRAQ6ISU1 281 aaPredicted RBP10.1□□□□□ -0.79
EPHA4-205ENST00000419964 L3MBTL2Q969R5 705 aa10.1□□□□□ -0.79
EPHA4-205ENST00000419964 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.1□□□□□ -0.79
EPHA4-205ENST00000419964 ATP7AQ04656 1500 aa10.1□□□□□ -0.79
EPHA4-205ENST00000419964 KANK1Q14678 1352 aa10.1□□□□□ -0.79
EPHA4-205ENST00000419964 CD109Q6YHK3 1445 aa10.09□□□□□ -0.79
EPHA4-205ENST00000419964 SCAPERQ9BY12 1400 aa10.09□□□□□ -0.79
EPHA4-205ENST00000419964 TRAPPC8Q9Y2L5 1435 aa10.09□□□□□ -0.79
EPHA4-205ENST00000419964 PPEF1O14829 653 aaPredicted RBP10.09□□□□□ -0.79
EPHA4-205ENST00000419964 ZBTB24O43167 697 aaPredicted RBP10.09□□□□□ -0.79
EPHA4-205ENST00000419964 PPP1R18Q6NYC8 613 aa10.09□□□□□ -0.79
EPHA4-205ENST00000419964 PDXDC2PQ6P474 469 aa10.09□□□□□ -0.79
EPHA4-205ENST00000419964 GPSM3Q9Y4H4 160 aa10.09□□□□□ -0.79
EPHA4-205ENST00000419964 ATP10AO60312 1499 aa10.09□□□□□ -0.79
EPHA4-205ENST00000419964 ZBBXA8MT70 800 aa10.08□□□□□ -0.8
EPHA4-205ENST00000419964 PTK2Q05397 1052 aa10.08□□□□□ -0.8
EPHA4-205ENST00000419964 NR1H3Q13133 447 aa10.08□□□□□ -0.8
EPHA4-205ENST00000419964 CCDC144AA2RUR9 1427 aa10.07□□□□□ -0.8
EPHA4-205ENST00000419964 SOX11P35716 441 aa10.07□□□□□ -0.8
EPHA4-205ENST00000419964 VAC14Q08AM6 782 aa10.07□□□□□ -0.8
EPHA4-205ENST00000419964 GLI2P10070 1586 aa10.06□□□□□ -0.8
EPHA4-205ENST00000419964 POM121CA8CG34 1229 aa10.06□□□□□ -0.8
EPHA4-205ENST00000419964 DEPDC5O75140 1603 aa10.06□□□□□ -0.8
EPHA4-205ENST00000419964 UHRF1BP1Q6BDS2 1440 aa10.06□□□□□ -0.8
EPHA4-205ENST00000419964 DHX29Q7Z478 1369 aaKnown RBP10.05□□□□□ -0.8
EPHA4-205ENST00000419964 FBXO45P0C2W1 286 aa10.05□□□□□ -0.8
EPHA4-205ENST00000419964 CALR3Q96L12 384 aaKnown RBP10.05□□□□□ -0.8
EPHA4-205ENST00000419964 C1orf115Q9H7X2 142 aa10.05□□□□□ -0.8
EPHA4-205ENST00000419964 PLSCR2Q9NRY7 297 aa10.05□□□□□ -0.8
EPHA4-205ENST00000419964 KDM5CP41229 1560 aa10.05□□□□□ -0.8
EPHA4-205ENST00000419964 MLH3Q9UHC1 1453 aa10.04□□□□□ -0.8
EPHA4-205ENST00000419964 AFAP1Q8N556 730 aa10.04□□□□□ -0.8
EPHA4-205ENST00000419964 BAP1Q92560 729 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms