RNA–Protein interactions for RNA: ENST00000419180.6

NPIPB3-201, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 3

Gene NPIPB3, Length 910 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-201ENST00000419180 TFCP2L1Q9NZI6 479 aa11.19□□□□□ -0.62
NPIPB3-201ENST00000419180 KIAA1210Q9ULL0 1709 aa11.18□□□□□ -0.62
NPIPB3-201ENST00000419180 CICQ96RK0 1608 aaPredicted RBP11.18□□□□□ -0.62
NPIPB3-201ENST00000419180 SRPK2P78362 688 aaKnown RBP11.18□□□□□ -0.62
NPIPB3-201ENST00000419180 COL13A1Q5TAT6 717 aaPredicted RBP11.18□□□□□ -0.62
NPIPB3-201ENST00000419180 DOT1LQ8TEK3 1739 aa11.18□□□□□ -0.62
NPIPB3-201ENST00000419180 NPM3O75607 178 aaKnown RBP11.17□□□□□ -0.62
NPIPB3-201ENST00000419180 KCNH5Q8NCM2 988 aa11.17□□□□□ -0.62
NPIPB3-201ENST00000419180 ERBB3P21860 1342 aa11.16□□□□□ -0.62
NPIPB3-201ENST00000419180 SOX12O15370 315 aa11.16□□□□□ -0.62
NPIPB3-201ENST00000419180 KCNQ4P56696 695 aa11.16□□□□□ -0.62
NPIPB3-201ENST00000419180 STAC3Q96MF2 364 aa11.16□□□□□ -0.62
NPIPB3-201ENST00000419180 BCL11AQ9H165 835 aa11.16□□□□□ -0.62
NPIPB3-201ENST00000419180 CABP2Q9NPB3 220 aa11.16□□□□□ -0.62
NPIPB3-201ENST00000419180 CD2APQ9Y5K6 639 aa11.16□□□□□ -0.62
NPIPB3-201ENST00000419180 KAT6BQ8WYB5 2073 aa11.15□□□□□ -0.62
NPIPB3-201ENST00000419180 IL2RBP14784 551 aa11.15□□□□□ -0.62
NPIPB3-201ENST00000419180 PRELPP51888 382 aa11.15□□□□□ -0.62
NPIPB3-201ENST00000419180 CABP1Q9NZU7 370 aa11.15□□□□□ -0.62
NPIPB3-201ENST00000419180 NSD2O96028 1365 aa11.15□□□□□ -0.63
NPIPB3-201ENST00000419180 USP54Q70EL1 1684 aa11.14□□□□□ -0.63
NPIPB3-201ENST00000419180 TMEM132AQ24JP5 1023 aa11.14□□□□□ -0.63
NPIPB3-201ENST00000419180 MSL1Q68DK7 614 aa11.14□□□□□ -0.63
NPIPB3-201ENST00000419180 COL23A1Q86Y22 540 aaPredicted RBP11.14□□□□□ -0.63
NPIPB3-201ENST00000419180 LTN1O94822 1766 aa11.13□□□□□ -0.63
NPIPB3-201ENST00000419180 TNS4Q8IZW8 715 aa11.13□□□□□ -0.63
NPIPB3-201ENST00000419180 C5P01031 1676 aa11.13□□□□□ -0.63
NPIPB3-201ENST00000419180 TTC21BQ7Z4L5 1316 aa11.12□□□□□ -0.63
NPIPB3-201ENST00000419180 CENPJQ9HC77 1338 aaPredicted RBP11.12□□□□□ -0.63
NPIPB3-201ENST00000419180 TOMM70O94826 608 aa11.12□□□□□ -0.63
NPIPB3-201ENST00000419180 JMYQ8N9B5 988 aa11.12□□□□□ -0.63
NPIPB3-201ENST00000419180 NLRP2Q9NX02 1062 aa11.12□□□□□ -0.63
NPIPB3-201ENST00000419180 ANKRD36BQ8N2N9 1353 aa11.12□□□□□ -0.63
NPIPB3-201ENST00000419180 IGSF1Q8N6C5 1336 aa11.11□□□□□ -0.63
NPIPB3-201ENST00000419180 KLRG1Q96E93 195 aa11.11□□□□□ -0.63
NPIPB3-201ENST00000419180 MON2Q7Z3U7 1717 aa11.11□□□□□ -0.63
NPIPB3-201ENST00000419180 FAM208AQ9UK61 1670 aaKnown RBP11.11□□□□□ -0.63
NPIPB3-201ENST00000419180 PCNTO95613 3336 aa11.11□□□□□ -0.63
NPIPB3-201ENST00000419180 TTC21AQ8NDW8 1320 aa11.1□□□□□ -0.63
NPIPB3-201ENST00000419180 TOGARAM1Q9Y4F4 1720 aa11.1□□□□□ -0.63
NPIPB3-201ENST00000419180 CCNL1Q9UK58 526 aaPredicted RBP11.1□□□□□ -0.63
NPIPB3-201ENST00000419180 WWC3Q9ULE0 1092 aa11.1□□□□□ -0.63
NPIPB3-201ENST00000419180 SLC34A2O95436 690 aa11.09□□□□□ -0.63
NPIPB3-201ENST00000419180 HTRA3P83110 453 aa11.09□□□□□ -0.63
NPIPB3-201ENST00000419180 SYTL4Q96C24 671 aaPredicted RBP11.09□□□□□ -0.63
NPIPB3-201ENST00000419180 TAF1LQ8IZX4 1826 aa11.08□□□□□ -0.64
NPIPB3-201ENST00000419180 DDX54Q8TDD1 881 aaKnown RBP11.08□□□□□ -0.64
NPIPB3-201ENST00000419180 KIAA1551Q9HCM1 1747 aa11.07□□□□□ -0.64
NPIPB3-201ENST00000419180 PRIM1P49642 420 aaKnown RBP11.07□□□□□ -0.64
NPIPB3-201ENST00000419180 NBPF1Q3BBV0 1214 aa11.07□□□□□ -0.64
NPIPB3-201ENST00000419180 ANKRD24Q8TF21 1146 aa11.07□□□□□ -0.64
NPIPB3-201ENST00000419180 USP31Q70CQ4 1352 aa11.06□□□□□ -0.64
NPIPB3-201ENST00000419180 RAB3GAP2Q9H2M9 1393 aa11.06□□□□□ -0.64
NPIPB3-201ENST00000419180 RBM46Q8TBY0 533 aaKnown RBP11.06□□□□□ -0.64
NPIPB3-201ENST00000419180 ZNF692Q9BU19 519 aaPredicted RBP11.06□□□□□ -0.64
NPIPB3-201ENST00000419180 NMRK2Q9NPI5 230 aa11.06□□□□□ -0.64
NPIPB3-201ENST00000419180 USP47Q96K76 1375 aa11.05□□□□□ -0.64
NPIPB3-201ENST00000419180 C4BP0C0L5 1744 aa11.05□□□□□ -0.64
NPIPB3-201ENST00000419180 UBR3Q6ZT12 1888 aa11.05□□□□□ -0.64
NPIPB3-201ENST00000419180 KTN1Q86UP2 1357 aaKnown RBP11.04□□□□□ -0.64
NPIPB3-201ENST00000419180 VSIG10Q8N0Z9 540 aa11.04□□□□□ -0.64
NPIPB3-201ENST00000419180 FLAD1Q8NFF5 587 aa11.04□□□□□ -0.64
NPIPB3-201ENST00000419180 PXDNLA1KZ92 1463 aa11.04□□□□□ -0.64
NPIPB3-201ENST00000419180 KIF13BQ9NQT8 1826 aa11.04□□□□□ -0.64
NPIPB3-201ENST00000419180 MEGF6O75095 1541 aa11.04□□□□□ -0.64
NPIPB3-201ENST00000419180 PKD1L3Q7Z443 1732 aa11.04□□□□□ -0.64
NPIPB3-201ENST00000419180 EVC2Q86UK5 1308 aa11.03□□□□□ -0.64
NPIPB3-201ENST00000419180 FSTL1Q12841 308 aa11.02□□□□□ -0.65
NPIPB3-201ENST00000419180 AMIGO3Q86WK7 504 aa11.02□□□□□ -0.65
NPIPB3-201ENST00000419180 C10orf71Q711Q0 1435 aa11.01□□□□□ -0.65
NPIPB3-201ENST00000419180 N4BP2Q86UW6 1770 aaPredicted RBP11.01□□□□□ -0.65
NPIPB3-201ENST00000419180 C1QBPQ07021 282 aaKnown RBP11.01□□□□□ -0.65
NPIPB3-201ENST00000419180 TNRC6CQ9HCJ0 1690 aaKnown RBP11.01□□□□□ -0.65
NPIPB3-201ENST00000419180 PALLDQ8WX93 1383 aa11.01□□□□□ -0.65
NPIPB3-201ENST00000419180 PLEKHG2Q9H7P9 1386 aa11.01□□□□□ -0.65
NPIPB3-201ENST00000419180 SBNO2Q9Y2G9 1366 aa11.01□□□□□ -0.65
NPIPB3-201ENST00000419180 RGPD2P0DJD1 1756 aa11□□□□□ -0.65
NPIPB3-201ENST00000419180 CD163L1Q9NR16 1453 aa11□□□□□ -0.65
NPIPB3-201ENST00000419180 BRCA1P38398 1863 aaKnown RBP11□□□□□ -0.65
NPIPB3-201ENST00000419180 HSPA1AP0DMV8 641 aaKnown RBP11□□□□□ -0.65
NPIPB3-201ENST00000419180 HSPA1BP0DMV9 641 aaKnown RBP11□□□□□ -0.65
NPIPB3-201ENST00000419180 NME9Q86XW9 330 aa11□□□□□ -0.65
NPIPB3-201ENST00000419180 NSD3Q9BZ95 1437 aa11□□□□□ -0.65
NPIPB3-201ENST00000419180 KCPQ6ZWJ8 1503 aa10.99□□□□□ -0.65
NPIPB3-201ENST00000419180 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.99□□□□□ -0.65
NPIPB3-201ENST00000419180 C16orf71Q8IYS4 520 aaPredicted RBP10.99□□□□□ -0.65
NPIPB3-201ENST00000419180 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.98□□□□□ -0.65
NPIPB3-201ENST00000419180 PHF14O94880 888 aa10.98□□□□□ -0.65
NPIPB3-201ENST00000419180 ZCRB1Q8TBF4 217 aaKnown RBP10.98□□□□□ -0.65
NPIPB3-201ENST00000419180 AK7Q96M32 723 aa10.98□□□□□ -0.65
NPIPB3-201ENST00000419180 HMGB2P26583 209 aaKnown RBP10.97□□□□□ -0.65
NPIPB3-201ENST00000419180 SMIM5Q71RC9 77 aa10.97□□□□□ -0.65
NPIPB3-201ENST00000419180 IP6K1Q92551 441 aa10.97□□□□□ -0.65
NPIPB3-201ENST00000419180 LTV1Q96GA3 475 aaPredicted RBP10.97□□□□□ -0.65
NPIPB3-201ENST00000419180 BCS1LQ9Y276 419 aa10.97□□□□□ -0.65
NPIPB3-201ENST00000419180 ARFGEF1Q9Y6D6 1849 aa10.97□□□□□ -0.65
NPIPB3-201ENST00000419180 MAP2P11137 1827 aaKnown RBP10.96□□□□□ -0.65
NPIPB3-201ENST00000419180 SSFA2P28290 1259 aa10.96□□□□□ -0.65
NPIPB3-201ENST00000419180 ITGB4P16144 1822 aa10.95□□□□□ -0.66
NPIPB3-201ENST00000419180 EDC4Q6P2E9 1401 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms