RNA–Protein interactions for RNA: ENST00000417023.5

DDX39B-203, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-203ENST00000417023 TRIM37O94972 964 aa17.44■□□□□ 0.38
DDX39B-203ENST00000417023 SF3B2Q13435 895 aaKnown RBP17.44■□□□□ 0.38
DDX39B-203ENST00000417023 KDRP35968 1356 aa17.43■□□□□ 0.38
DDX39B-203ENST00000417023 NHSQ6T4R5 1651 aa17.43■□□□□ 0.38
DDX39B-203ENST00000417023 CNGB1Q14028 1251 aaPredicted RBP17.43■□□□□ 0.38
DDX39B-203ENST00000417023 PPP2R1AP30153 589 aa17.42■□□□□ 0.38
DDX39B-203ENST00000417023 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.42■□□□□ 0.383e-20■□□□□ 9.1
DDX39B-203ENST00000417023 RGPD3A6NKT7 1758 aaPredicted RBP17.41■□□□□ 0.38
DDX39B-203ENST00000417023 RGPD4Q7Z3J3 1758 aa17.41■□□□□ 0.38
DDX39B-203ENST00000417023 ZNF316A6NFI3 1004 aaPredicted RBP17.4■□□□□ 0.38
DDX39B-203ENST00000417023 DIAPH1O60610 1272 aaKnown RBP17.4■□□□□ 0.38
DDX39B-203ENST00000417023 BAG6P46379 1132 aa17.4■□□□□ 0.38
DDX39B-203ENST00000417023 DEFB132Q7Z7B7 95 aa17.4■□□□□ 0.38
DDX39B-203ENST00000417023 DDX54Q8TDD1 881 aaKnown RBP17.4■□□□□ 0.38
DDX39B-203ENST00000417023 BCL11BQ9C0K0 894 aaPredicted RBP17.4■□□□□ 0.38
DDX39B-203ENST00000417023 PCDH11XQ9BZA7 1347 aa17.4■□□□□ 0.38
DDX39B-203ENST00000417023 PCDH11YQ9BZA8 1340 aa17.4■□□□□ 0.38
DDX39B-203ENST00000417023 DOT1LQ8TEK3 1739 aa17.38■□□□□ 0.37
DDX39B-203ENST00000417023 CYP27B1O15528 508 aa17.37■□□□□ 0.37
DDX39B-203ENST00000417023 APBA3O96018 575 aa17.37■□□□□ 0.37
DDX39B-203ENST00000417023 RALBP1Q15311 655 aa17.37■□□□□ 0.37
DDX39B-203ENST00000417023 SULT6B1Q6IMI4 303 aa17.37■□□□□ 0.37
DDX39B-203ENST00000417023 PTF1AQ7RTS3 328 aa17.37■□□□□ 0.37
DDX39B-203ENST00000417023 AEBP1Q8IUX7 1158 aa17.37■□□□□ 0.37
DDX39B-203ENST00000417023 SPG7Q9UQ90 795 aa17.37■□□□□ 0.37
DDX39B-203ENST00000417023 RREB1Q92766 1687 aa17.36■□□□□ 0.37
DDX39B-203ENST00000417023 CFAP53Q96M91 514 aa17.36■□□□□ 0.37
DDX39B-203ENST00000417023 CAMKK2Q96RR4 588 aa17.36■□□□□ 0.37
DDX39B-203ENST00000417023 BTAF1O14981 1849 aa17.35■□□□□ 0.37
DDX39B-203ENST00000417023 PLSCR1O15162 318 aa17.35■□□□□ 0.37
DDX39B-203ENST00000417023 KCNQ2O43526 872 aa17.35■□□□□ 0.37
DDX39B-203ENST00000417023 EN1Q05925 392 aaPredicted RBP17.35■□□□□ 0.37
DDX39B-203ENST00000417023 NKX1-1Q15270 411 aaPredicted RBP17.35■□□□□ 0.37
DDX39B-203ENST00000417023 AMOTQ4VCS5 1084 aa17.34■□□□□ 0.37
DDX39B-203ENST00000417023 KAT6BQ8WYB5 2073 aa17.33■□□□□ 0.37
DDX39B-203ENST00000417023 TOGARAM1Q9Y4F4 1720 aa17.33■□□□□ 0.37
DDX39B-203ENST00000417023 ACSBG1Q96GR2 724 aa17.33■□□□□ 0.36
DDX39B-203ENST00000417023 PHKG2P15735 406 aa17.32■□□□□ 0.36
DDX39B-203ENST00000417023 EZH2Q15910 746 aaKnown RBP17.32■□□□□ 0.36
DDX39B-203ENST00000417023 PLEKHO1Q53GL0 409 aaPredicted RBP17.32■□□□□ 0.36
DDX39B-203ENST00000417023 IFNL2Q8IZJ0 200 aa17.32■□□□□ 0.36
DDX39B-203ENST00000417023 NUP188Q5SRE5 1749 aa17.31■□□□□ 0.36
DDX39B-203ENST00000417023 ITGB4P16144 1822 aa17.31■□□□□ 0.36
DDX39B-203ENST00000417023 HMOX1P09601 288 aa17.3■□□□□ 0.36
DDX39B-203ENST00000417023 PRIM1P49642 420 aaKnown RBP17.3■□□□□ 0.36
DDX39B-203ENST00000417023 NUDCQ9Y266 331 aa17.3■□□□□ 0.36
DDX39B-203ENST00000417023 MYBBP1AQ9BQG0 1328 aaKnown RBP17.29■□□□□ 0.36
DDX39B-203ENST00000417023 U2SURPO15042 1029 aaKnown RBP17.29■□□□□ 0.36
DDX39B-203ENST00000417023 PRKRIP1Q9H875 184 aaPredicted RBP17.29■□□□□ 0.36
DDX39B-203ENST00000417023 HSP90AB1P08238 724 aaKnown RBP17.27■□□□□ 0.36
DDX39B-203ENST00000417023 ZNF530Q6P9A1 599 aaPredicted RBP17.27■□□□□ 0.36
DDX39B-203ENST00000417023 PROM2Q8N271 834 aa17.27■□□□□ 0.36
DDX39B-203ENST00000417023 LY75O60449 1722 aa17.27■□□□□ 0.35
DDX39B-203ENST00000417023 DCAF5Q96JK2 942 aa17.26■□□□□ 0.35
DDX39B-203ENST00000417023 RSPH6AQ9H0K4 717 aa17.26■□□□□ 0.35
DDX39B-203ENST00000417023 KDM6AO15550 1401 aaPredicted RBP17.26■□□□□ 0.35
DDX39B-203ENST00000417023 ADAMTS7Q9UKP4 1686 aa17.26■□□□□ 0.35
DDX39B-203ENST00000417023 SYTL4Q96C24 671 aaPredicted RBP17.25■□□□□ 0.35
DDX39B-203ENST00000417023 SCN11AQ9UI33 1791 aa17.25■□□□□ 0.35
DDX39B-203ENST00000417023 FCHSD2O94868 740 aa17.24■□□□□ 0.35
DDX39B-203ENST00000417023 U2AF1L5P0DN76 240 aaPredicted RBP17.24■□□□□ 0.35
DDX39B-203ENST00000417023 U2AF1Q01081 240 aaKnown RBP eCLIP17.24■□□□□ 0.353e-17■■■□□ 16.1
DDX39B-203ENST00000417023 TXNRD1Q16881 649 aa17.24■□□□□ 0.35
DDX39B-203ENST00000417023 MTHFSDQ2M296 383 aaKnown RBP17.24■□□□□ 0.35
DDX39B-203ENST00000417023 C1orf141Q5JVX7 400 aa17.24■□□□□ 0.35
DDX39B-203ENST00000417023 PAPPAQ13219 1627 aa17.23■□□□□ 0.35
DDX39B-203ENST00000417023 ERVV-2B6SEH9 535 aa17.23■□□□□ 0.35
DDX39B-203ENST00000417023 AKAP4Q5JQC9 854 aa17.23■□□□□ 0.35
DDX39B-203ENST00000417023 VIRMAQ69YN4 1812 aaKnown RBP17.22■□□□□ 0.35
DDX39B-203ENST00000417023 PRKAR2BP31323 418 aa17.22■□□□□ 0.35
DDX39B-203ENST00000417023 MPRIPQ6WCQ1 1025 aa17.22■□□□□ 0.35
DDX39B-203ENST00000417023 PIGBQ92521 554 aa17.22■□□□□ 0.35
DDX39B-203ENST00000417023 SLC27A3Q5K4L6 730 aa17.21■□□□□ 0.35
DDX39B-203ENST00000417023 MRC1P22897 1456 aa17.2■□□□□ 0.34
DDX39B-203ENST00000417023 GAS2L2Q8NHY3 880 aa17.2■□□□□ 0.34
DDX39B-203ENST00000417023 PHACTR3Q96KR7 559 aa17.2■□□□□ 0.34
DDX39B-203ENST00000417023 TMOD3Q9NYL9 352 aa17.2■□□□□ 0.34
DDX39B-203ENST00000417023 PALLDQ8WX93 1383 aa17.18■□□□□ 0.34
DDX39B-203ENST00000417023 MAP3K5Q99683 1374 aa17.18■□□□□ 0.34
DDX39B-203ENST00000417023 NBPF14Q5TI25 921 aa17.18■□□□□ 0.34
DDX39B-203ENST00000417023 SMARCC1Q92922 1105 aaPredicted RBP17.18■□□□□ 0.34
DDX39B-203ENST00000417023 LRRC4BQ9NT99 713 aa17.18■□□□□ 0.34
DDX39B-203ENST00000417023 PLEKHF1Q96S99 279 aa17.17■□□□□ 0.34
DDX39B-203ENST00000417023 ANO8Q9HCE9 1232 aaPredicted RBP17.17■□□□□ 0.34
DDX39B-203ENST00000417023 ZNF831Q5JPB2 1677 aa17.16■□□□□ 0.34
DDX39B-203ENST00000417023 RNMTO43148 476 aaKnown RBP17.16■□□□□ 0.34
DDX39B-203ENST00000417023 LGR6Q9HBX8 967 aa17.16■□□□□ 0.34
DDX39B-203ENST00000417023 TAF1LQ8IZX4 1826 aa17.15■□□□□ 0.34
DDX39B-203ENST00000417023 GNAT3A8MTJ3 354 aa17.15■□□□□ 0.34
DDX39B-203ENST00000417023 CABP4P57796 275 aa17.15■□□□□ 0.34
DDX39B-203ENST00000417023 R3HDM1Q15032 1099 aaKnown RBP17.15■□□□□ 0.34
DDX39B-203ENST00000417023 ATG3Q9NT62 314 aa17.15■□□□□ 0.34
DDX39B-203ENST00000417023 ASAP1Q9ULH1 1129 aa17.15■□□□□ 0.34
DDX39B-203ENST00000417023 C5P01031 1676 aa17.14■□□□□ 0.33
DDX39B-203ENST00000417023 NFATC2IPQ8NCF5 419 aa17.14■□□□□ 0.33
DDX39B-203ENST00000417023 PNNQ9H307 717 aaKnown RBP17.14■□□□□ 0.33
DDX39B-203ENST00000417023 SLC52A2Q9HAB3 445 aa17.14■□□□□ 0.33
DDX39B-203ENST00000417023 CCNL1Q9UK58 526 aaPredicted RBP17.14■□□□□ 0.33
DDX39B-203ENST00000417023 SIPA1L3O60292 1781 aaPredicted RBP17.14■□□□□ 0.33
DDX39B-203ENST00000417023 CEMIPQ8WUJ3 1361 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms