RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 KNDC1Q76NI1 1749 aa18.27■□□□□ 0.52
LINC00475-202ENST00000416438 CEP85Q6P2H3 762 aa18.27■□□□□ 0.52
LINC00475-202ENST00000416438 MON2Q7Z3U7 1717 aa18.27■□□□□ 0.51
LINC00475-202ENST00000416438 SIRT1Q96EB6 747 aa18.26■□□□□ 0.51
LINC00475-202ENST00000416438 CIZ1Q9ULV3 898 aaPredicted RBP18.26■□□□□ 0.51
LINC00475-202ENST00000416438 RGS12O14924 1447 aa18.26■□□□□ 0.51
LINC00475-202ENST00000416438 SLC4A2P04920 1241 aa18.26■□□□□ 0.51
LINC00475-202ENST00000416438 SSFA2P28290 1259 aa18.26■□□□□ 0.51
LINC00475-202ENST00000416438 LTKP29376 864 aa18.26■□□□□ 0.51
LINC00475-202ENST00000416438 CEBPAP49715 358 aaPredicted RBP18.26■□□□□ 0.51
LINC00475-202ENST00000416438 PLPPR3Q6T4P5 718 aa18.25■□□□□ 0.51
LINC00475-202ENST00000416438 MSH6P52701 1360 aa18.25■□□□□ 0.51
LINC00475-202ENST00000416438 GBP4Q96PP9 640 aa18.25■□□□□ 0.51
LINC00475-202ENST00000416438 ADAMTS13Q76LX8 1427 aa18.25■□□□□ 0.51
LINC00475-202ENST00000416438 UBR1Q8IWV7 1749 aa18.25■□□□□ 0.51
LINC00475-202ENST00000416438 SLC26A8Q96RN1 970 aa18.24■□□□□ 0.51
LINC00475-202ENST00000416438 ATP10DQ9P241 1426 aa18.24■□□□□ 0.51
LINC00475-202ENST00000416438 F6X3S4 739 aa18.24■□□□□ 0.51
LINC00475-202ENST00000416438 EIF5BO60841 1220 aaKnown RBP18.24■□□□□ 0.51
LINC00475-202ENST00000416438 SLC4A10Q6U841 1118 aa18.24■□□□□ 0.51
LINC00475-202ENST00000416438 G2E3Q7L622 706 aa18.24■□□□□ 0.51
LINC00475-202ENST00000416438 GAS2L3Q86XJ1 694 aa18.24■□□□□ 0.51
LINC00475-202ENST00000416438 GRPEL1Q9HAV7 217 aa18.24■□□□□ 0.51
LINC00475-202ENST00000416438 C3P01024 1663 aa18.24■□□□□ 0.51
LINC00475-202ENST00000416438 MRE11P49959 708 aa18.23■□□□□ 0.51
LINC00475-202ENST00000416438 RPAP2Q8IXW5 612 aaPredicted RBP18.23■□□□□ 0.51
LINC00475-202ENST00000416438 KIF24Q5T7B8 1368 aa18.23■□□□□ 0.51
LINC00475-202ENST00000416438 ITSN1Q15811 1721 aa18.23■□□□□ 0.51
LINC00475-202ENST00000416438 AKAP12Q02952 1782 aa18.23■□□□□ 0.51
LINC00475-202ENST00000416438 SDSP20132 328 aa18.23■□□□□ 0.51
LINC00475-202ENST00000416438 RTL1A6NKG5 1358 aa18.23■□□□□ 0.51
LINC00475-202ENST00000416438 USP26Q9BXU7 913 aa18.22■□□□□ 0.51
LINC00475-202ENST00000416438 MTHFSDQ2M296 383 aaKnown RBP18.22■□□□□ 0.51
LINC00475-202ENST00000416438 MAP3K19Q56UN5 1328 aa18.21■□□□□ 0.51
LINC00475-202ENST00000416438 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.21■□□□□ 0.51
LINC00475-202ENST00000416438 PLEKHG3A1L390 1219 aa18.2■□□□□ 0.5
LINC00475-202ENST00000416438 TSPYL4Q9UJ04 414 aa18.19■□□□□ 0.5
LINC00475-202ENST00000416438 PTPRCP08575 1304 aa18.19■□□□□ 0.5
LINC00475-202ENST00000416438 KIAA0232Q92628 1395 aa18.19■□□□□ 0.5
LINC00475-202ENST00000416438 OVOS2A0A0J9YW53 1432 aa18.19■□□□□ 0.5
LINC00475-202ENST00000416438 CRB1P82279 1406 aa18.19■□□□□ 0.5
LINC00475-202ENST00000416438 OVOS2Q6IE36 1432 aa18.19■□□□□ 0.5
LINC00475-202ENST00000416438 HAP1P54257 671 aaPredicted RBP18.19■□□□□ 0.5
LINC00475-202ENST00000416438 RABEP1Q15276 862 aa18.18■□□□□ 0.5
LINC00475-202ENST00000416438 USP6P35125 1406 aa18.18■□□□□ 0.5
LINC00475-202ENST00000416438 RTF1Q92541 710 aaKnown RBP18.17■□□□□ 0.5
LINC00475-202ENST00000416438 NECTIN2Q92692 538 aa18.17■□□□□ 0.5
LINC00475-202ENST00000416438 PLEKHG1Q9ULL1 1385 aa18.17■□□□□ 0.5
LINC00475-202ENST00000416438 PTPRUQ92729 1446 aa18.17■□□□□ 0.5
LINC00475-202ENST00000416438 PKP1Q13835 747 aa18.17■□□□□ 0.5
LINC00475-202ENST00000416438 TSHZ3Q63HK5 1081 aa18.17■□□□□ 0.5
LINC00475-202ENST00000416438 BAG4O95429 457 aaKnown RBP18.16■□□□□ 0.5
LINC00475-202ENST00000416438 PEAK1Q9H792 1746 aa18.15■□□□□ 0.5
LINC00475-202ENST00000416438 EXOC6BQ9Y2D4 811 aa18.15■□□□□ 0.5
LINC00475-202ENST00000416438 NRKQ7Z2Y5 1582 aa18.15■□□□□ 0.5
LINC00475-202ENST00000416438 SKOR2Q2VWA4 1001 aaPredicted RBP18.15■□□□□ 0.5
LINC00475-202ENST00000416438 EYA1Q99502 592 aa18.15■□□□□ 0.5
LINC00475-202ENST00000416438 ZGPATQ8N5A5 531 aaKnown RBP18.14■□□□□ 0.49
LINC00475-202ENST00000416438 AMOTL2Q9Y2J4 779 aa18.14■□□□□ 0.49
LINC00475-202ENST00000416438 USP31Q70CQ4 1352 aa18.13■□□□□ 0.49
LINC00475-202ENST00000416438 AMPHP49418 695 aa18.13■□□□□ 0.49
LINC00475-202ENST00000416438 EID1Q9Y6B2 187 aa18.13■□□□□ 0.49
LINC00475-202ENST00000416438 NUTM2GQ5VZR2 741 aa18.13■□□□□ 0.49
LINC00475-202ENST00000416438 CASC1Q6TDU7 716 aa18.13■□□□□ 0.49
LINC00475-202ENST00000416438 NGDNQ8NEJ9 315 aaKnown RBP18.13■□□□□ 0.49
LINC00475-202ENST00000416438 DDX49Q9Y6V7 483 aaKnown RBP18.13■□□□□ 0.49
LINC00475-202ENST00000416438 TOPAZ1Q8N9V7 1692 aa18.12■□□□□ 0.49
LINC00475-202ENST00000416438 MCTP1Q6DN14 999 aa18.12■□□□□ 0.49
LINC00475-202ENST00000416438 HMMRO75330 724 aa18.12■□□□□ 0.49
LINC00475-202ENST00000416438 PDE1AP54750 535 aa18.12■□□□□ 0.49
LINC00475-202ENST00000416438 GOLGA6L22H0YM25 854 aa18.11■□□□□ 0.49
LINC00475-202ENST00000416438 CHAMP1Q96JM3 812 aa18.11■□□□□ 0.49
LINC00475-202ENST00000416438 CCT4P50991 539 aaKnown RBP18.1■□□□□ 0.49
LINC00475-202ENST00000416438 ISY1Q9ULR0 285 aaKnown RBP18.1■□□□□ 0.49
LINC00475-202ENST00000416438 AK9Q5TCS8 1911 aa18.1■□□□□ 0.49
LINC00475-202ENST00000416438 ERC2O15083 957 aa18.1■□□□□ 0.49
LINC00475-202ENST00000416438 CLEC17AQ6ZS10 378 aa18.1■□□□□ 0.49
LINC00475-202ENST00000416438 RIMS1Q86UR5 1692 aaKnown RBP18.1■□□□□ 0.49
LINC00475-202ENST00000416438 ERBB4Q15303 1308 aa18.09■□□□□ 0.49
LINC00475-202ENST00000416438 SSH2Q76I76 1423 aa18.09■□□□□ 0.49
LINC00475-202ENST00000416438 PNMA6EA0A0J9YXQ4 647 aa18.09■□□□□ 0.49
LINC00475-202ENST00000416438 GNAI2P04899 355 aa18.09■□□□□ 0.49
LINC00475-202ENST00000416438 NCLP19338 710 aaKnown RBP18.09■□□□□ 0.49
LINC00475-202ENST00000416438 FKBP5Q13451 457 aaPredicted RBP18.09■□□□□ 0.49
LINC00475-202ENST00000416438 ARHGEF10O15013 1369 aa18.09■□□□□ 0.49
LINC00475-202ENST00000416438 REC8O95072 547 aa18.09■□□□□ 0.49
LINC00475-202ENST00000416438 STK31Q9BXU1 1019 aa18.09■□□□□ 0.49
LINC00475-202ENST00000416438 ST18O60284 1047 aa18.08■□□□□ 0.49
LINC00475-202ENST00000416438 PTMSP20962 102 aa18.08■□□□□ 0.49
LINC00475-202ENST00000416438 FLIIQ13045 1269 aa18.08■□□□□ 0.49
LINC00475-202ENST00000416438 LTV1Q96GA3 475 aaPredicted RBP18.08■□□□□ 0.49
LINC00475-202ENST00000416438 FLT4P35916 1363 aa18.08■□□□□ 0.48
LINC00475-202ENST00000416438 CYP2E1P05181 493 aaPredicted RBP18.08■□□□□ 0.48
LINC00475-202ENST00000416438 CLCN1P35523 988 aa18.08■□□□□ 0.48
LINC00475-202ENST00000416438 KLHL40Q2TBA0 621 aa18.08■□□□□ 0.48
LINC00475-202ENST00000416438 NLRP6P59044 892 aa18.07■□□□□ 0.48
LINC00475-202ENST00000416438 NUCB2P80303 420 aa18.07■□□□□ 0.48
LINC00475-202ENST00000416438 CEP170BQ9Y4F5 1589 aaPredicted RBP18.07■□□□□ 0.48
LINC00475-202ENST00000416438 SBNO1A3KN83 1393 aa18.07■□□□□ 0.48
LINC00475-202ENST00000416438 RGPD1P0DJD0 1748 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms