RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 EIF4A2Q14240 407 aaKnown RBP22.24■■□□□ 1.15
SCARB1-203ENST00000415380 NAP1L5Q96NT1 182 aaPredicted RBP22.24■■□□□ 1.15
SCARB1-203ENST00000415380 MSH6P52701 1360 aa22.24■■□□□ 1.15
SCARB1-203ENST00000415380 AKAP12Q02952 1782 aa22.24■■□□□ 1.15
SCARB1-203ENST00000415380 CHL1O00533 1208 aa22.24■■□□□ 1.15
SCARB1-203ENST00000415380 AGLP35573 1532 aa22.23■■□□□ 1.15
SCARB1-203ENST00000415380 SDSP20132 328 aa22.23■■□□□ 1.15
SCARB1-203ENST00000415380 HAP1P54257 671 aaPredicted RBP22.23■■□□□ 1.15
SCARB1-203ENST00000415380 RTL1A6NKG5 1358 aa22.23■■□□□ 1.15
SCARB1-203ENST00000415380 SMARCA5O60264 1052 aaPredicted RBP22.22■■□□□ 1.15
SCARB1-203ENST00000415380 MCM10Q7L590 875 aa22.22■■□□□ 1.15
SCARB1-203ENST00000415380 KLHL40Q2TBA0 621 aa22.22■■□□□ 1.15
SCARB1-203ENST00000415380 ITSN1Q15811 1721 aa22.22■■□□□ 1.15
SCARB1-203ENST00000415380 TRIM44Q96DX7 344 aaPredicted RBP22.22■■□□□ 1.15
SCARB1-203ENST00000415380 DDX49Q9Y6V7 483 aaKnown RBP22.22■■□□□ 1.15
SCARB1-203ENST00000415380 PRR36Q9H6K5 1346 aa22.21■■□□□ 1.15
SCARB1-203ENST00000415380 APBB1O00213 710 aa22.21■■□□□ 1.15
SCARB1-203ENST00000415380 KIAA0232Q92628 1395 aa22.21■■□□□ 1.15
SCARB1-203ENST00000415380 MEIS3Q99687 375 aa22.21■■□□□ 1.15
SCARB1-203ENST00000415380 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.2■■□□□ 1.14
SCARB1-203ENST00000415380 PTPRCP08575 1304 aa22.2■■□□□ 1.14
SCARB1-203ENST00000415380 MLECQ14165 292 aa22.19■■□□□ 1.14
SCARB1-203ENST00000415380 NUCB2P80303 420 aa22.19■■□□□ 1.14
SCARB1-203ENST00000415380 SIRT1Q96EB6 747 aa22.19■■□□□ 1.14
SCARB1-203ENST00000415380 AK9Q5TCS8 1911 aa22.19■■□□□ 1.14
SCARB1-203ENST00000415380 IBTKQ9P2D0 1353 aaPredicted RBP22.18■■□□□ 1.14
SCARB1-203ENST00000415380 CYP2E1P05181 493 aaPredicted RBP22.18■■□□□ 1.14
SCARB1-203ENST00000415380 CASC1Q6TDU7 716 aa22.18■■□□□ 1.14
SCARB1-203ENST00000415380 TECPR2O15040 1411 aa22.18■■□□□ 1.14
SCARB1-203ENST00000415380 MCTP1Q6DN14 999 aa22.18■■□□□ 1.14
SCARB1-203ENST00000415380 PKP1Q13835 747 aa22.16■■□□□ 1.14
SCARB1-203ENST00000415380 TTC21BQ7Z4L5 1316 aa22.16■■□□□ 1.14
SCARB1-203ENST00000415380 NASPP49321 788 aaPredicted RBP22.15■■□□□ 1.14
SCARB1-203ENST00000415380 SLC4A2P04920 1241 aa22.15■■□□□ 1.14
SCARB1-203ENST00000415380 FAM69CQ0P6D2 419 aa22.15■■□□□ 1.14
SCARB1-203ENST00000415380 CRB1P82279 1406 aa22.15■■□□□ 1.14
SCARB1-203ENST00000415380 CCDC173Q0VFZ6 552 aa22.15■■□□□ 1.14
SCARB1-203ENST00000415380 ST18O60284 1047 aa22.14■■□□□ 1.13
SCARB1-203ENST00000415380 UBE2Q2Q8WVN8 375 aa22.14■■□□□ 1.13
SCARB1-203ENST00000415380 HSP90AB2PQ58FF8 381 aa22.14■■□□□ 1.13
SCARB1-203ENST00000415380 PPP1R9BQ96SB3 815 aa22.14■■□□□ 1.13
SCARB1-203ENST00000415380 CWC22Q9HCG8 908 aaKnown RBP22.14■■□□□ 1.13
SCARB1-203ENST00000415380 LMBRD1Q9NUN5 540 aa22.14■■□□□ 1.13
SCARB1-203ENST00000415380 REC8O95072 547 aa22.13■■□□□ 1.13
SCARB1-203ENST00000415380 OVOS2A0A0J9YW53 1432 aa22.13■■□□□ 1.13
SCARB1-203ENST00000415380 OVOS2Q6IE36 1432 aa22.13■■□□□ 1.13
SCARB1-203ENST00000415380 ZGPATQ8N5A5 531 aaKnown RBP22.13■■□□□ 1.13
SCARB1-203ENST00000415380 PEAK1Q9H792 1746 aa22.12■■□□□ 1.13
SCARB1-203ENST00000415380 MIS18AQ9NYP9 233 aa22.12■■□□□ 1.13
SCARB1-203ENST00000415380 ERC2O15083 957 aa22.11■■□□□ 1.13
SCARB1-203ENST00000415380 HMMRO75330 724 aa22.11■■□□□ 1.13
SCARB1-203ENST00000415380 ZNF445P59923 1031 aa22.11■■□□□ 1.13
SCARB1-203ENST00000415380 ACEP12821 1306 aa22.11■■□□□ 1.13
SCARB1-203ENST00000415380 RGPD1P0DJD0 1748 aa22.11■■□□□ 1.13
SCARB1-203ENST00000415380 ROBO2Q9HCK4 1378 aa22.11■■□□□ 1.13
SCARB1-203ENST00000415380 NCLP19338 710 aaKnown RBP22.1■■□□□ 1.13
SCARB1-203ENST00000415380 CAVIN1Q6NZI2 390 aaKnown RBP22.1■■□□□ 1.13
SCARB1-203ENST00000415380 G2E3Q7L622 706 aa22.1■■□□□ 1.13
SCARB1-203ENST00000415380 SLC4A10Q6U841 1118 aa22.09■■□□□ 1.13
SCARB1-203ENST00000415380 OSBPL3Q9H4L5 887 aa22.09■■□□□ 1.13
SCARB1-203ENST00000415380 F6X3S4 739 aa22.09■■□□□ 1.13
SCARB1-203ENST00000415380 PDE1AP54750 535 aa22.09■■□□□ 1.13
SCARB1-203ENST00000415380 ZSCAN23Q3MJ62 389 aa22.09■■□□□ 1.13
SCARB1-203ENST00000415380 CYB5RLQ6IPT4 315 aa22.09■■□□□ 1.13
SCARB1-203ENST00000415380 TSPOAP1O95153 1857 aa22.09■■□□□ 1.13
SCARB1-203ENST00000415380 ZDHHC9Q9Y397 364 aa22.08■■□□□ 1.13
SCARB1-203ENST00000415380 FOXO3O43524 673 aa22.08■■□□□ 1.13
SCARB1-203ENST00000415380 ANP32BQ92688 251 aaKnown RBP22.08■■□□□ 1.13
SCARB1-203ENST00000415380 DIP2BQ9P265 1576 aa22.07■■□□□ 1.12
SCARB1-203ENST00000415380 NUTM2FA1L443 756 aa22.07■■□□□ 1.12
SCARB1-203ENST00000415380 CCT4P50991 539 aaKnown RBP22.07■■□□□ 1.12
SCARB1-203ENST00000415380 HDGFP51858 240 aaKnown RBP22.07■■□□□ 1.12
SCARB1-203ENST00000415380 SOX12O15370 315 aa22.07■■□□□ 1.12
SCARB1-203ENST00000415380 TSPYL4Q9UJ04 414 aa22.07■■□□□ 1.12
SCARB1-203ENST00000415380 NALCNQ8IZF0 1738 aa22.06■■□□□ 1.12
SCARB1-203ENST00000415380 USP6P35125 1406 aa22.06■■□□□ 1.12
SCARB1-203ENST00000415380 MAP3K19Q56UN5 1328 aa22.06■■□□□ 1.12
SCARB1-203ENST00000415380 PRPF40AO75400 957 aaKnown RBP22.06■■□□□ 1.12
SCARB1-203ENST00000415380 MTHFSDQ2M296 383 aaKnown RBP22.06■■□□□ 1.12
SCARB1-203ENST00000415380 USP31Q70CQ4 1352 aa22.05■■□□□ 1.12
SCARB1-203ENST00000415380 TOPAZ1Q8N9V7 1692 aa22.05■■□□□ 1.12
SCARB1-203ENST00000415380 PLEKHG3A1L390 1219 aa22.05■■□□□ 1.12
SCARB1-203ENST00000415380 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.05■■□□□ 1.12
SCARB1-203ENST00000415380 ARHGEF10O15013 1369 aa22.04■■□□□ 1.12
SCARB1-203ENST00000415380 GPT2Q8TD30 523 aa22.04■■□□□ 1.12
SCARB1-203ENST00000415380 RTF1Q92541 710 aaKnown RBP22.04■■□□□ 1.12
SCARB1-203ENST00000415380 EXOC6BQ9Y2D4 811 aa22.04■■□□□ 1.12
SCARB1-203ENST00000415380 GNAI2P04899 355 aa22.03■■□□□ 1.12
SCARB1-203ENST00000415380 TSHZ3Q63HK5 1081 aa22.03■■□□□ 1.12
SCARB1-203ENST00000415380 ZSCAN30Q86W11 494 aa22.03■■□□□ 1.12
SCARB1-203ENST00000415380 RIMS1Q86UR5 1692 aaKnown RBP22.03■■□□□ 1.12
SCARB1-203ENST00000415380 RBSNQ9H1K0 784 aa22.02■■□□□ 1.12
SCARB1-203ENST00000415380 SALL3Q9BXA9 1300 aa22.02■■□□□ 1.12
SCARB1-203ENST00000415380 RBM27Q9P2N5 1060 aaKnown RBP22.02■■□□□ 1.12
SCARB1-203ENST00000415380 NEK4P51957 841 aa22.01■■□□□ 1.11
SCARB1-203ENST00000415380 CHAMP1Q96JM3 812 aa22.01■■□□□ 1.11
SCARB1-203ENST00000415380 ESF1Q9H501 851 aaKnown RBP22.01■■□□□ 1.11
SCARB1-203ENST00000415380 TMEM2Q9UHN6 1383 aa22.01■■□□□ 1.11
SCARB1-203ENST00000415380 TMX3Q96JJ7 454 aa22■■□□□ 1.11
SCARB1-203ENST00000415380 ESYT1Q9BSJ8 1104 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms