RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 IGSF1Q8N6C5 1336 aa19.35■□□□□ 0.69
RAPGEF1-204ENST00000414781 SYTL4Q96C24 671 aaPredicted RBP19.35■□□□□ 0.69
RAPGEF1-204ENST00000414781 KIAA1210Q9ULL0 1709 aa19.34■□□□□ 0.69
RAPGEF1-204ENST00000414781 RBM46Q8TBY0 533 aaKnown RBP19.33■□□□□ 0.68
RAPGEF1-204ENST00000414781 CCER1Q8TC90 406 aaPredicted RBP19.33■□□□□ 0.68
RAPGEF1-204ENST00000414781 DDX54Q8TDD1 881 aaKnown RBP19.33■□□□□ 0.68
RAPGEF1-204ENST00000414781 LY75O60449 1722 aa19.32■□□□□ 0.68
RAPGEF1-204ENST00000414781 PRIM1P49642 420 aaKnown RBP19.32■□□□□ 0.68
RAPGEF1-204ENST00000414781 CICQ96RK0 1608 aaPredicted RBP19.32■□□□□ 0.68
RAPGEF1-204ENST00000414781 WDR90Q96KV7 1748 aa19.31■□□□□ 0.68
RAPGEF1-204ENST00000414781 KAT6BQ8WYB5 2073 aa19.31■□□□□ 0.68
RAPGEF1-204ENST00000414781 SLC34A2O95436 690 aa19.31■□□□□ 0.68
RAPGEF1-204ENST00000414781 ANKRD24Q8TF21 1146 aa19.31■□□□□ 0.68
RAPGEF1-204ENST00000414781 NSD2O96028 1365 aa19.31■□□□□ 0.68
RAPGEF1-204ENST00000414781 USP47Q96K76 1375 aa19.3■□□□□ 0.68
RAPGEF1-204ENST00000414781 EVC2Q86UK5 1308 aa19.29■□□□□ 0.68
RAPGEF1-204ENST00000414781 FSTL1Q12841 308 aa19.28■□□□□ 0.68
RAPGEF1-204ENST00000414781 USP31Q70CQ4 1352 aa19.28■□□□□ 0.68
RAPGEF1-204ENST00000414781 CLSPNQ9HAW4 1339 aa19.27■□□□□ 0.68
RAPGEF1-204ENST00000414781 C16orf71Q8IYS4 520 aaPredicted RBP19.27■□□□□ 0.68
RAPGEF1-204ENST00000414781 NBPF1Q3BBV0 1214 aa19.26■□□□□ 0.67
RAPGEF1-204ENST00000414781 KTN1Q86UP2 1357 aaKnown RBP19.25■□□□□ 0.67
RAPGEF1-204ENST00000414781 NMRK2Q9NPI5 230 aa19.25■□□□□ 0.67
RAPGEF1-204ENST00000414781 WWC3Q9ULE0 1092 aa19.25■□□□□ 0.67
RAPGEF1-204ENST00000414781 NSD3Q9BZ95 1437 aa19.24■□□□□ 0.67
RAPGEF1-204ENST00000414781 DOT1LQ8TEK3 1739 aa19.23■□□□□ 0.67
RAPGEF1-204ENST00000414781 HTRA3P83110 453 aa19.21■□□□□ 0.67
RAPGEF1-204ENST00000414781 USP54Q70EL1 1684 aa19.2■□□□□ 0.66
RAPGEF1-204ENST00000414781 PLEKHG2Q9H7P9 1386 aa19.2■□□□□ 0.66
RAPGEF1-204ENST00000414781 ZCRB1Q8TBF4 217 aaKnown RBP19.2■□□□□ 0.66
RAPGEF1-204ENST00000414781 AK7Q96M32 723 aa19.19■□□□□ 0.66
RAPGEF1-204ENST00000414781 C5P01031 1676 aa19.19■□□□□ 0.66
RAPGEF1-204ENST00000414781 FAM208AQ9UK61 1670 aaKnown RBP19.18■□□□□ 0.66
RAPGEF1-204ENST00000414781 C10orf71Q711Q0 1435 aa19.17■□□□□ 0.66
RAPGEF1-204ENST00000414781 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.17■□□□□ 0.66
RAPGEF1-204ENST00000414781 IP6K1Q92551 441 aa19.17■□□□□ 0.66
RAPGEF1-204ENST00000414781 LTN1O94822 1766 aa19.16■□□□□ 0.66
RAPGEF1-204ENST00000414781 HSPA1AP0DMV8 641 aaKnown RBP19.16■□□□□ 0.66
RAPGEF1-204ENST00000414781 HSPA1BP0DMV9 641 aaKnown RBP19.16■□□□□ 0.66
RAPGEF1-204ENST00000414781 KDM2BQ8NHM5 1336 aa19.16■□□□□ 0.66
RAPGEF1-204ENST00000414781 PALLDQ8WX93 1383 aa19.16■□□□□ 0.66
RAPGEF1-204ENST00000414781 TGFB2P61812 414 aa19.15■□□□□ 0.66
RAPGEF1-204ENST00000414781 PCDH10Q9P2E7 1040 aa19.15■□□□□ 0.66
RAPGEF1-204ENST00000414781 PXDNLA1KZ92 1463 aa19.15■□□□□ 0.66
RAPGEF1-204ENST00000414781 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.14■□□□□ 0.65
RAPGEF1-204ENST00000414781 SSFA2P28290 1259 aa19.14■□□□□ 0.65
RAPGEF1-204ENST00000414781 ARHGAP27Q6ZUM4 889 aa19.14■□□□□ 0.65
RAPGEF1-204ENST00000414781 NME9Q86XW9 330 aa19.14■□□□□ 0.65
RAPGEF1-204ENST00000414781 BCS1LQ9Y276 419 aa19.14■□□□□ 0.65
RAPGEF1-204ENST00000414781 CGNL1Q0VF96 1302 aa19.14■□□□□ 0.65
RAPGEF1-204ENST00000414781 SMC1BQ8NDV3 1235 aa19.13■□□□□ 0.65
RAPGEF1-204ENST00000414781 MON2Q7Z3U7 1717 aa19.13■□□□□ 0.65
RAPGEF1-204ENST00000414781 SBNO2Q9Y2G9 1366 aa19.12■□□□□ 0.65
RAPGEF1-204ENST00000414781 PHF14O94880 888 aa19.12■□□□□ 0.65
RAPGEF1-204ENST00000414781 SMARCC1Q92922 1105 aaPredicted RBP19.12■□□□□ 0.65
RAPGEF1-204ENST00000414781 LTV1Q96GA3 475 aaPredicted RBP19.12■□□□□ 0.65
RAPGEF1-204ENST00000414781 C4BP0C0L5 1744 aa19.11■□□□□ 0.65
RAPGEF1-204ENST00000414781 MEGF6O75095 1541 aa19.11■□□□□ 0.65
RAPGEF1-204ENST00000414781 PCNTO95613 3336 aa19.11■□□□□ 0.65
RAPGEF1-204ENST00000414781 ZEB1P37275 1124 aaPredicted RBP19.1■□□□□ 0.65
RAPGEF1-204ENST00000414781 C9orf131Q5VYM1 1079 aa19.1■□□□□ 0.65
RAPGEF1-204ENST00000414781 AMIGO3Q86WK7 504 aa19.08■□□□□ 0.64
RAPGEF1-204ENST00000414781 TIMELESSQ9UNS1 1208 aa19.08■□□□□ 0.64
RAPGEF1-204ENST00000414781 TOGARAM1Q9Y4F4 1720 aa19.08■□□□□ 0.64
RAPGEF1-204ENST00000414781 EDC4Q6P2E9 1401 aaKnown RBP19.08■□□□□ 0.64
RAPGEF1-204ENST00000414781 TAF1LQ8IZX4 1826 aa19.07■□□□□ 0.64
RAPGEF1-204ENST00000414781 MMP10P09238 476 aa19.07■□□□□ 0.64
RAPGEF1-204ENST00000414781 HDGFL2Q7Z4V5 671 aaPredicted RBP19.07■□□□□ 0.64
RAPGEF1-204ENST00000414781 KCPQ6ZWJ8 1503 aa19.06■□□□□ 0.64
RAPGEF1-204ENST00000414781 FCHSD2O94868 740 aa19.06■□□□□ 0.64
RAPGEF1-204ENST00000414781 PCDH11XQ9BZA7 1347 aa19.05■□□□□ 0.64
RAPGEF1-204ENST00000414781 PCDH11YQ9BZA8 1340 aa19.05■□□□□ 0.64
RAPGEF1-204ENST00000414781 A0A0G2JLW4 131 aa19.05■□□□□ 0.64
RAPGEF1-204ENST00000414781 NEUROD1Q13562 356 aa19.05■□□□□ 0.64
RAPGEF1-204ENST00000414781 RAPGEF4Q8WZA2 1011 aa19.05■□□□□ 0.64
RAPGEF1-204ENST00000414781 UBR3Q6ZT12 1888 aa19.05■□□□□ 0.64
RAPGEF1-204ENST00000414781 MPRIPQ6WCQ1 1025 aa19.04■□□□□ 0.64
RAPGEF1-204ENST00000414781 SIN3AQ96ST3 1273 aa19.04■□□□□ 0.64
RAPGEF1-204ENST00000414781 RRAGCQ9HB90 399 aa19.04■□□□□ 0.64
RAPGEF1-204ENST00000414781 KIF13BQ9NQT8 1826 aa19.04■□□□□ 0.64
RAPGEF1-204ENST00000414781 CD163L1Q9NR16 1453 aa19.03■□□□□ 0.64
RAPGEF1-204ENST00000414781 HOXC9P31274 260 aa19.03■□□□□ 0.64
RAPGEF1-204ENST00000414781 KIAA1551Q9HCM1 1747 aa19.03■□□□□ 0.64
RAPGEF1-204ENST00000414781 TNRC6CQ9HCJ0 1690 aaKnown RBP19.02■□□□□ 0.64
RAPGEF1-204ENST00000414781 DPEP1P16444 411 aa19.02■□□□□ 0.64
RAPGEF1-204ENST00000414781 AMPHP49418 695 aa19.02■□□□□ 0.64
RAPGEF1-204ENST00000414781 CCDC87Q9NVE4 849 aa19.02■□□□□ 0.64
RAPGEF1-204ENST00000414781 ZC3H4Q9UPT8 1303 aaKnown RBP19.01■□□□□ 0.63
RAPGEF1-204ENST00000414781 TATP17735 454 aaPredicted RBP19.01■□□□□ 0.63
RAPGEF1-204ENST00000414781 NLGN1Q8N2Q7 840 aa19.01■□□□□ 0.63
RAPGEF1-204ENST00000414781 RNF181Q9P0P0 153 aa19.01■□□□□ 0.63
RAPGEF1-204ENST00000414781 MAP3K19Q56UN5 1328 aa19■□□□□ 0.63
RAPGEF1-204ENST00000414781 GNPATO15228 680 aa19■□□□□ 0.63
RAPGEF1-204ENST00000414781 SMIM5Q71RC9 77 aa19■□□□□ 0.63
RAPGEF1-204ENST00000414781 TERF2IPQ9NYB0 399 aa19■□□□□ 0.63
RAPGEF1-204ENST00000414781 RTL1A6NKG5 1358 aa19■□□□□ 0.63
RAPGEF1-204ENST00000414781 PKD1L3Q7Z443 1732 aa19■□□□□ 0.63
RAPGEF1-204ENST00000414781 LINC00116Q8NCU8 138 aa18.99■□□□□ 0.63
RAPGEF1-204ENST00000414781 SMG6Q86US8 1419 aaKnown RBP18.99■□□□□ 0.63
RAPGEF1-204ENST00000414781 LOC102724428A0A0B4J2F2 783 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms