RNA–Protein interactions for RNA: ENST00000413718.1

LINC00111-201, long intergenic non-protein coding RNA 111, humanhuman

TSL 3 BASIC

Gene LINC00111, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00111-201ENST00000413718 POLD1P28340 1107 aa13.41□□□□□ -0.26
LINC00111-201ENST00000413718 HOXC9P31274 260 aa13.41□□□□□ -0.26
LINC00111-201ENST00000413718 PRIM1P49642 420 aaKnown RBP13.41□□□□□ -0.26
LINC00111-201ENST00000413718 DDX54Q8TDD1 881 aaKnown RBP13.41□□□□□ -0.26
LINC00111-201ENST00000413718 ADCY9O60503 1353 aa13.41□□□□□ -0.26
LINC00111-201ENST00000413718 TOGARAM1Q9Y4F4 1720 aa13.41□□□□□ -0.26
LINC00111-201ENST00000413718 C5P01031 1676 aa13.4□□□□□ -0.26
LINC00111-201ENST00000413718 TMC1Q8TDI8 760 aa13.4□□□□□ -0.26
LINC00111-201ENST00000413718 TESK2Q96S53 571 aa13.4□□□□□ -0.26
LINC00111-201ENST00000413718 CARD11Q9BXL7 1154 aa13.4□□□□□ -0.26
LINC00111-201ENST00000413718 TERF2IPQ9NYB0 399 aa13.4□□□□□ -0.26
LINC00111-201ENST00000413718 TFCP2L1Q9NZI6 479 aa13.4□□□□□ -0.26
LINC00111-201ENST00000413718 NEUROD1Q13562 356 aa13.39□□□□□ -0.27
LINC00111-201ENST00000413718 KAT6BQ8WYB5 2073 aa13.39□□□□□ -0.27
LINC00111-201ENST00000413718 COL23A1Q86Y22 540 aaPredicted RBP13.38□□□□□ -0.27
LINC00111-201ENST00000413718 KLHL34Q8N239 644 aa13.38□□□□□ -0.27
LINC00111-201ENST00000413718 LTV1Q96GA3 475 aaPredicted RBP13.38□□□□□ -0.27
LINC00111-201ENST00000413718 CCNL1Q9UK58 526 aaPredicted RBP13.38□□□□□ -0.27
LINC00111-201ENST00000413718 ATP10DQ9P241 1426 aa13.38□□□□□ -0.27
LINC00111-201ENST00000413718 TAF1LQ8IZX4 1826 aa13.37□□□□□ -0.27
LINC00111-201ENST00000413718 FBLN1P23142 703 aa13.37□□□□□ -0.27
LINC00111-201ENST00000413718 ZCRB1Q8TBF4 217 aaKnown RBP13.37□□□□□ -0.27
LINC00111-201ENST00000413718 SYTL4Q96C24 671 aaPredicted RBP13.37□□□□□ -0.27
LINC00111-201ENST00000413718 NCAPD2Q15021 1401 aa13.37□□□□□ -0.27
LINC00111-201ENST00000413718 PKD1L3Q7Z443 1732 aa13.36□□□□□ -0.27
LINC00111-201ENST00000413718 USP47Q96K76 1375 aa13.35□□□□□ -0.27
LINC00111-201ENST00000413718 NBPF6Q5VWK0 638 aa13.35□□□□□ -0.27
LINC00111-201ENST00000413718 PELP1Q8IZL8 1130 aaKnown RBP13.35□□□□□ -0.27
LINC00111-201ENST00000413718 COG3Q96JB2 828 aa13.35□□□□□ -0.27
LINC00111-201ENST00000413718 NBPF4Q96M43 638 aa13.35□□□□□ -0.27
LINC00111-201ENST00000413718 C4BP0C0L5 1744 aa13.35□□□□□ -0.27
LINC00111-201ENST00000413718 CICQ96RK0 1608 aaPredicted RBP13.35□□□□□ -0.27
LINC00111-201ENST00000413718 MSL1Q68DK7 614 aa13.34□□□□□ -0.27
LINC00111-201ENST00000413718 AMIGO3Q86WK7 504 aa13.34□□□□□ -0.27
LINC00111-201ENST00000413718 CGNL1Q0VF96 1302 aa13.34□□□□□ -0.27
LINC00111-201ENST00000413718 PALLDQ8WX93 1383 aa13.33□□□□□ -0.27
LINC00111-201ENST00000413718 GRIN3BO60391 1043 aa13.33□□□□□ -0.28
LINC00111-201ENST00000413718 IFFO2Q5TF58 517 aa13.33□□□□□ -0.28
LINC00111-201ENST00000413718 USHBP1Q8N6Y0 703 aa13.33□□□□□ -0.28
LINC00111-201ENST00000413718 UBR3Q6ZT12 1888 aa13.33□□□□□ -0.28
LINC00111-201ENST00000413718 MAP2P11137 1827 aaKnown RBP13.32□□□□□ -0.28
LINC00111-201ENST00000413718 AMPHP49418 695 aa13.32□□□□□ -0.28
LINC00111-201ENST00000413718 RRS1Q15050 365 aaKnown RBP13.32□□□□□ -0.28
LINC00111-201ENST00000413718 ANKRD26Q9UPS8 1709 aa13.32□□□□□ -0.28
LINC00111-201ENST00000413718 INSRP06213 1382 aa13.32□□□□□ -0.28
LINC00111-201ENST00000413718 CD2APQ9Y5K6 639 aa13.31□□□□□ -0.28
LINC00111-201ENST00000413718 KIF20BQ96Q89 1820 aa13.31□□□□□ -0.28
LINC00111-201ENST00000413718 PCDH11XQ9BZA7 1347 aa13.31□□□□□ -0.28
LINC00111-201ENST00000413718 PCDH11YQ9BZA8 1340 aa13.31□□□□□ -0.28
LINC00111-201ENST00000413718 KIF24Q5T7B8 1368 aa13.31□□□□□ -0.28
LINC00111-201ENST00000413718 SMG6Q86US8 1419 aaKnown RBP13.3□□□□□ -0.28
LINC00111-201ENST00000413718 ST20-MTHFSA0A0A6YYL1 179 aa13.3□□□□□ -0.28
LINC00111-201ENST00000413718 FYB1O15117 783 aa13.3□□□□□ -0.28
LINC00111-201ENST00000413718 CYP27B1O15528 508 aa13.3□□□□□ -0.28
LINC00111-201ENST00000413718 FLT4P35916 1363 aa13.3□□□□□ -0.28
LINC00111-201ENST00000413718 ITGB4P16144 1822 aa13.29□□□□□ -0.28
LINC00111-201ENST00000413718 KIAA1551Q9HCM1 1747 aa13.29□□□□□ -0.28
LINC00111-201ENST00000413718 TONSLQ96HA7 1378 aa13.29□□□□□ -0.28
LINC00111-201ENST00000413718 GGNBP2Q9H3C7 697 aa13.28□□□□□ -0.28
LINC00111-201ENST00000413718 MSH5O43196 834 aa13.27□□□□□ -0.29
LINC00111-201ENST00000413718 HSP90AB2PQ58FF8 381 aa13.27□□□□□ -0.29
LINC00111-201ENST00000413718 FLAD1Q8NFF5 587 aa13.27□□□□□ -0.29
LINC00111-201ENST00000413718 RAPGEF4Q8WZA2 1011 aa13.27□□□□□ -0.29
LINC00111-201ENST00000413718 NSD3Q9BZ95 1437 aa13.27□□□□□ -0.29
LINC00111-201ENST00000413718 TATP17735 454 aaPredicted RBP13.26□□□□□ -0.29
LINC00111-201ENST00000413718 IGSF1Q8N6C5 1336 aa13.26□□□□□ -0.29
LINC00111-201ENST00000413718 KIF13BQ9NQT8 1826 aa13.25□□□□□ -0.29
LINC00111-201ENST00000413718 NKX1-1Q15270 411 aaPredicted RBP13.25□□□□□ -0.29
LINC00111-201ENST00000413718 SMIM5Q71RC9 77 aa13.25□□□□□ -0.29
LINC00111-201ENST00000413718 PXDNLA1KZ92 1463 aa13.24□□□□□ -0.29
LINC00111-201ENST00000413718 KDRP35968 1356 aa13.24□□□□□ -0.29
LINC00111-201ENST00000413718 HSPA6P17066 643 aa13.24□□□□□ -0.29
LINC00111-201ENST00000413718 LINC00116Q8NCU8 138 aa13.24□□□□□ -0.29
LINC00111-201ENST00000413718 PIGBQ92521 554 aa13.24□□□□□ -0.29
LINC00111-201ENST00000413718 GPBP1L1Q9HC44 474 aaPredicted RBP13.24□□□□□ -0.29
LINC00111-201ENST00000413718 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.23□□□□□ -0.29
LINC00111-201ENST00000413718 KIF3CO14782 793 aa13.23□□□□□ -0.29
LINC00111-201ENST00000413718 SSFA2P28290 1259 aa13.23□□□□□ -0.29
LINC00111-201ENST00000413718 MPRIPQ6WCQ1 1025 aa13.23□□□□□ -0.29
LINC00111-201ENST00000413718 SMARCC1Q92922 1105 aaPredicted RBP13.23□□□□□ -0.29
LINC00111-201ENST00000413718 AK7Q96M32 723 aa13.23□□□□□ -0.29
LINC00111-201ENST00000413718 C10orf71Q711Q0 1435 aa13.22□□□□□ -0.29
LINC00111-201ENST00000413718 EMILIN1Q9Y6C2 1016 aa13.22□□□□□ -0.29
LINC00111-201ENST00000413718 ZNF831Q5JPB2 1677 aa13.21□□□□□ -0.29
LINC00111-201ENST00000413718 LOC102724428A0A0B4J2F2 783 aa13.21□□□□□ -0.29
LINC00111-201ENST00000413718 SLC24A1O60721 1099 aa13.21□□□□□ -0.29
LINC00111-201ENST00000413718 PHF14O94880 888 aa13.21□□□□□ -0.29
LINC00111-201ENST00000413718 HMGB2P26583 209 aaKnown RBP13.21□□□□□ -0.29
LINC00111-201ENST00000413718 SIK1P57059 783 aa13.21□□□□□ -0.29
LINC00111-201ENST00000413718 ITPK1Q13572 414 aa13.21□□□□□ -0.29
LINC00111-201ENST00000413718 CARD14Q9BXL6 1004 aa13.21□□□□□ -0.29
LINC00111-201ENST00000413718 PLEKHG2Q9H7P9 1386 aa13.2□□□□□ -0.3
LINC00111-201ENST00000413718 ZNF526Q8TF50 670 aaPredicted RBP13.2□□□□□ -0.3
LINC00111-201ENST00000413718 TMF1P82094 1093 aa13.19□□□□□ -0.3
LINC00111-201ENST00000413718 WWC3Q9ULE0 1092 aa13.19□□□□□ -0.3
LINC00111-201ENST00000413718 COL5A3P25940 1745 aaPredicted RBP13.19□□□□□ -0.3
LINC00111-201ENST00000413718 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.18□□□□□ -0.3
LINC00111-201ENST00000413718 ASAP1Q9ULH1 1129 aa13.18□□□□□ -0.3
LINC00111-201ENST00000413718 BRCA1P38398 1863 aaKnown RBP13.18□□□□□ -0.3
LINC00111-201ENST00000413718 WASHC2AQ641Q2 1341 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms