RNA–Protein interactions for RNA: ENST00000412845.1

NEFHP1-201, Transcript of neurofilament heavy pseudogene 1, humanhuman

BASIC

Gene NEFHP1, Length 2,629 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFHP1-201ENST00000412845 TPM2P07951 284 aa23.13■■□□□ 1.29
NEFHP1-201ENST00000412845 CEP85Q6P2H3 762 aa23.13■■□□□ 1.29
NEFHP1-201ENST00000412845 CDK12Q9NYV4 1490 aaPredicted RBP23.13■■□□□ 1.29
NEFHP1-201ENST00000412845 RGS12O14924 1447 aa23.13■■□□□ 1.29
NEFHP1-201ENST00000412845 PRPF40AO75400 957 aaKnown RBP23.13■■□□□ 1.29
NEFHP1-201ENST00000412845 LMOD3Q0VAK6 560 aa23.13■■□□□ 1.29
NEFHP1-201ENST00000412845 GPT2Q8TD30 523 aa23.12■■□□□ 1.29
NEFHP1-201ENST00000412845 PRIM1P49642 420 aaKnown RBP23.12■■□□□ 1.29
NEFHP1-201ENST00000412845 OFD1O75665 1012 aa23.11■■□□□ 1.29
NEFHP1-201ENST00000412845 MSNP26038 577 aaKnown RBP23.11■■□□□ 1.29
NEFHP1-201ENST00000412845 MSH6P52701 1360 aa23.11■■□□□ 1.29
NEFHP1-201ENST00000412845 NCKAP5LQ9HCH0 1330 aa23.1■■□□□ 1.29
NEFHP1-201ENST00000412845 MEIS3Q99687 375 aa23.1■■□□□ 1.29
NEFHP1-201ENST00000412845 CWC22Q9HCG8 908 aaKnown RBP23.1■■□□□ 1.29
NEFHP1-201ENST00000412845 ST18O60284 1047 aa23.09■■□□□ 1.29
NEFHP1-201ENST00000412845 RPAP2Q8IXW5 612 aaPredicted RBP23.09■■□□□ 1.29
NEFHP1-201ENST00000412845 CPSF1Q10570 1443 aaKnown RBP23.09■■□□□ 1.29
NEFHP1-201ENST00000412845 RTL1A6NKG5 1358 aa23.09■■□□□ 1.29
NEFHP1-201ENST00000412845 STAG3Q9UJ98 1225 aa23.09■■□□□ 1.29
NEFHP1-201ENST00000412845 EDC4Q6P2E9 1401 aaKnown RBP23.09■■□□□ 1.29
NEFHP1-201ENST00000412845 AEBP1Q8IUX7 1158 aa23.08■■□□□ 1.29
NEFHP1-201ENST00000412845 NSFL1CQ9UNZ2 370 aaKnown RBP23.08■■□□□ 1.28
NEFHP1-201ENST00000412845 FOXD4L5Q5VV16 416 aaPredicted RBP23.07■■□□□ 1.28
NEFHP1-201ENST00000412845 FOXD4L4Q8WXT5 416 aaPredicted RBP23.07■■□□□ 1.28
NEFHP1-201ENST00000412845 NEO1Q92859 1461 aa23.07■■□□□ 1.28
NEFHP1-201ENST00000412845 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.07■■□□□ 1.28
NEFHP1-201ENST00000412845 CASC1Q6TDU7 716 aa23.06■■□□□ 1.28
NEFHP1-201ENST00000412845 PDLIM2Q96JY6 352 aa23.06■■□□□ 1.28
NEFHP1-201ENST00000412845 AATKQ6ZMQ8 1374 aa23.06■■□□□ 1.28
NEFHP1-201ENST00000412845 CPS1P31327 1500 aa23.06■■□□□ 1.28
NEFHP1-201ENST00000412845 TMEM63CQ9P1W3 806 aa23.06■■□□□ 1.28
NEFHP1-201ENST00000412845 RICTORQ6R327 1708 aa23.06■■□□□ 1.28
NEFHP1-201ENST00000412845 MCM10Q7L590 875 aa23.05■■□□□ 1.28
NEFHP1-201ENST00000412845 COG3Q96JB2 828 aa23.05■■□□□ 1.28
NEFHP1-201ENST00000412845 ZMYND15Q9H091 742 aa23.05■■□□□ 1.28
NEFHP1-201ENST00000412845 REC8O95072 547 aa23.04■■□□□ 1.28
NEFHP1-201ENST00000412845 ERC2O15083 957 aa23.03■■□□□ 1.28
NEFHP1-201ENST00000412845 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.03■■□□□ 1.28
NEFHP1-201ENST00000412845 NOL7Q9UMY1 257 aaKnown RBP23.03■■□□□ 1.28
NEFHP1-201ENST00000412845 DLC1Q96QB1 1528 aa23.03■■□□□ 1.28
NEFHP1-201ENST00000412845 SYCE3A1L190 88 aa23.02■■□□□ 1.28
NEFHP1-201ENST00000412845 WASLO00401 505 aaPredicted RBP23.02■■□□□ 1.28
NEFHP1-201ENST00000412845 RIMBP3CA6NJZ7 1639 aa23.02■■□□□ 1.28
NEFHP1-201ENST00000412845 RIMBP3BA6NNM3 1639 aa23.02■■□□□ 1.28
NEFHP1-201ENST00000412845 RIMBP3Q9UFD9 1639 aa23.02■■□□□ 1.28
NEFHP1-201ENST00000412845 CHL1O00533 1208 aa23.02■■□□□ 1.28
NEFHP1-201ENST00000412845 SULT6B1Q6IMI4 303 aa23.02■■□□□ 1.28
NEFHP1-201ENST00000412845 XPCQ01831 940 aaPredicted RBP23.01■■□□□ 1.27
NEFHP1-201ENST00000412845 HS1BP3Q53T59 392 aa23.01■■□□□ 1.27
NEFHP1-201ENST00000412845 TSHZ3Q63HK5 1081 aa23.01■■□□□ 1.27
NEFHP1-201ENST00000412845 R3HCC1Q9Y3T6 440 aaKnown RBP23■■□□□ 1.27
NEFHP1-201ENST00000412845 SETD1AO15047 1707 aaKnown RBP22.99■■□□□ 1.27
NEFHP1-201ENST00000412845 NEK4P51957 841 aa22.99■■□□□ 1.27
NEFHP1-201ENST00000412845 LRSAM1Q6UWE0 723 aa22.99■■□□□ 1.27
NEFHP1-201ENST00000412845 PDE1AP54750 535 aa22.99■■□□□ 1.27
NEFHP1-201ENST00000412845 NUDT16Q96DE0 195 aaKnown RBP22.99■■□□□ 1.27
NEFHP1-201ENST00000412845 TMX3Q96JJ7 454 aa22.99■■□□□ 1.27
NEFHP1-201ENST00000412845 RBM10P98175 930 aaKnown RBP22.98■■□□□ 1.27
NEFHP1-201ENST00000412845 EIF4A2Q14240 407 aaKnown RBP22.98■■□□□ 1.27
NEFHP1-201ENST00000412845 PKNOX2Q96KN3 472 aa22.98■■□□□ 1.27
NEFHP1-201ENST00000412845 PDCL3Q9H2J4 239 aa22.98■■□□□ 1.27
NEFHP1-201ENST00000412845 ZNF500O60304 480 aaPredicted RBP22.98■■□□□ 1.27
NEFHP1-201ENST00000412845 SLC4A2P04920 1241 aa22.98■■□□□ 1.27
NEFHP1-201ENST00000412845 MIS18AQ9NYP9 233 aa22.98■■□□□ 1.27
NEFHP1-201ENST00000412845 PTPRCP08575 1304 aa22.98■■□□□ 1.27
NEFHP1-201ENST00000412845 F6X3S4 739 aa22.97■■□□□ 1.27
NEFHP1-201ENST00000412845 G2E3Q7L622 706 aa22.96■■□□□ 1.27
NEFHP1-201ENST00000412845 TXNDC2Q86VQ3 553 aa22.96■■□□□ 1.27
NEFHP1-201ENST00000412845 SLC4A10Q6U841 1118 aa22.96■■□□□ 1.27
NEFHP1-201ENST00000412845 MON2Q7Z3U7 1717 aa22.96■■□□□ 1.27
NEFHP1-201ENST00000412845 RNF214Q8ND24 703 aa22.95■■□□□ 1.27
NEFHP1-201ENST00000412845 KIAA0232Q92628 1395 aa22.95■■□□□ 1.26
NEFHP1-201ENST00000412845 NOL8Q76FK4 1167 aaKnown RBP22.95■■□□□ 1.26
NEFHP1-201ENST00000412845 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.95■■□□□ 1.26
NEFHP1-201ENST00000412845 OSBPL3Q9H4L5 887 aa22.95■■□□□ 1.26
NEFHP1-201ENST00000412845 PALD1Q9ULE6 856 aa22.95■■□□□ 1.26
NEFHP1-201ENST00000412845 EXOC6BQ9Y2D4 811 aa22.95■■□□□ 1.26
NEFHP1-201ENST00000412845 ZKSCAN5Q9Y2L8 839 aa22.95■■□□□ 1.26
NEFHP1-201ENST00000412845 A2ML1A8K2U0 1454 aa22.94■■□□□ 1.26
NEFHP1-201ENST00000412845 HAP1P54257 671 aaPredicted RBP22.94■■□□□ 1.26
NEFHP1-201ENST00000412845 HMMRO75330 724 aa22.93■■□□□ 1.26
NEFHP1-201ENST00000412845 CCDC61Q9Y6R9 512 aa22.93■■□□□ 1.26
NEFHP1-201ENST00000412845 C3P01024 1663 aa22.93■■□□□ 1.26
NEFHP1-201ENST00000412845 BRD1O95696 1058 aa22.93■■□□□ 1.26
NEFHP1-201ENST00000412845 TERF1P54274 439 aa22.93■■□□□ 1.26
NEFHP1-201ENST00000412845 METP08581 1390 aa22.92■■□□□ 1.26
NEFHP1-201ENST00000412845 ESYT1Q9BSJ8 1104 aa22.92■■□□□ 1.26
NEFHP1-201ENST00000412845 NRKQ7Z2Y5 1582 aa22.92■■□□□ 1.26
NEFHP1-201ENST00000412845 TUBGCP6Q96RT7 1819 aa22.91■■□□□ 1.26
NEFHP1-201ENST00000412845 FOXD4L6Q3SYB3 417 aaPredicted RBP22.9■■□□□ 1.26
NEFHP1-201ENST00000412845 FOXD4L3Q6VB84 417 aaPredicted RBP22.9■■□□□ 1.26
NEFHP1-201ENST00000412845 CRB1P82279 1406 aa22.9■■□□□ 1.26
NEFHP1-201ENST00000412845 AKAP12Q02952 1782 aa22.9■■□□□ 1.26
NEFHP1-201ENST00000412845 SALL3Q9BXA9 1300 aa22.9■■□□□ 1.26
NEFHP1-201ENST00000412845 CUL4AQ13619 759 aa22.9■■□□□ 1.26
NEFHP1-201ENST00000412845 TCHHQ07283 1943 aa22.89■■□□□ 1.26
NEFHP1-201ENST00000412845 PRR36Q9H6K5 1346 aa22.89■■□□□ 1.26
NEFHP1-201ENST00000412845 MBD3O95983 291 aa22.89■■□□□ 1.26
NEFHP1-201ENST00000412845 HSP90AB2PQ58FF8 381 aa22.89■■□□□ 1.26
NEFHP1-201ENST00000412845 FAM13BQ9NYF5 915 aa22.89■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms