RNA–Protein interactions for RNA: ENST00000412777.6

LRTOMT-204, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 4

Gene LRTOMT, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-204ENST00000412777 BCL11BQ9C0K0 894 aaPredicted RBP12.21□□□□□ -0.45
LRTOMT-204ENST00000412777 NHSQ6T4R5 1651 aa12.2□□□□□ -0.46
LRTOMT-204ENST00000412777 PTF1AQ7RTS3 328 aa12.2□□□□□ -0.46
LRTOMT-204ENST00000412777 CAMKK2Q96RR4 588 aa12.2□□□□□ -0.46
LRTOMT-204ENST00000412777 PKD1L3Q7Z443 1732 aa12.2□□□□□ -0.46
LRTOMT-204ENST00000412777 PARD3Q8TEW0 1356 aa12.19□□□□□ -0.46
LRTOMT-204ENST00000412777 IGSF1Q8N6C5 1336 aa12.19□□□□□ -0.46
LRTOMT-204ENST00000412777 MTHFSP49914 203 aa12.19□□□□□ -0.46
LRTOMT-204ENST00000412777 DDX54Q8TDD1 881 aaKnown RBP12.19□□□□□ -0.46
LRTOMT-204ENST00000412777 RGPD3A6NKT7 1758 aaPredicted RBP12.19□□□□□ -0.46
LRTOMT-204ENST00000412777 RGPD4Q7Z3J3 1758 aa12.19□□□□□ -0.46
LRTOMT-204ENST00000412777 CNGB1Q14028 1251 aaPredicted RBP12.18□□□□□ -0.46
LRTOMT-204ENST00000412777 EZH2Q15910 746 aaKnown RBP12.18□□□□□ -0.46
LRTOMT-204ENST00000412777 RREB1Q92766 1687 aa12.18□□□□□ -0.46
LRTOMT-204ENST00000412777 KCNQ2O43526 872 aa12.17□□□□□ -0.46
LRTOMT-204ENST00000412777 IL13P35225 146 aa12.17□□□□□ -0.46
LRTOMT-204ENST00000412777 ACSBG1Q96GR2 724 aa12.17□□□□□ -0.46
LRTOMT-204ENST00000412777 PLEKHG2Q9H7P9 1386 aa12.17□□□□□ -0.46
LRTOMT-204ENST00000412777 BTAF1O14981 1849 aa12.16□□□□□ -0.46
LRTOMT-204ENST00000412777 PCDH11XQ9BZA7 1347 aa12.16□□□□□ -0.46
LRTOMT-204ENST00000412777 PCDH11YQ9BZA8 1340 aa12.16□□□□□ -0.46
LRTOMT-204ENST00000412777 PLSCR1O15162 318 aa12.16□□□□□ -0.46
LRTOMT-204ENST00000412777 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.16□□□□□ -0.46
LRTOMT-204ENST00000412777 DOT1LQ8TEK3 1739 aa12.16□□□□□ -0.46
LRTOMT-204ENST00000412777 COL3A1P02461 1466 aaPredicted RBP12.15□□□□□ -0.46
LRTOMT-204ENST00000412777 NUP188Q5SRE5 1749 aa12.15□□□□□ -0.46
LRTOMT-204ENST00000412777 CYP27B1O15528 508 aa12.15□□□□□ -0.46
LRTOMT-204ENST00000412777 KDRP35968 1356 aa12.15□□□□□ -0.46
LRTOMT-204ENST00000412777 AEBP1Q8IUX7 1158 aa12.14□□□□□ -0.47
LRTOMT-204ENST00000412777 SPG7Q9UQ90 795 aa12.14□□□□□ -0.47
LRTOMT-204ENST00000412777 DIAPH1O60610 1272 aaKnown RBP12.13□□□□□ -0.47
LRTOMT-204ENST00000412777 SULT6B1Q6IMI4 303 aa12.13□□□□□ -0.47
LRTOMT-204ENST00000412777 TOGARAM1Q9Y4F4 1720 aa12.12□□□□□ -0.47
LRTOMT-204ENST00000412777 PPP2R1AP30153 589 aa12.12□□□□□ -0.47
LRTOMT-204ENST00000412777 PRIM1P49642 420 aaKnown RBP12.12□□□□□ -0.47
LRTOMT-204ENST00000412777 DDX10Q13206 875 aaKnown RBP12.12□□□□□ -0.47
LRTOMT-204ENST00000412777 NKX1-1Q15270 411 aaPredicted RBP12.12□□□□□ -0.47
LRTOMT-204ENST00000412777 PROM2Q8N271 834 aa12.12□□□□□ -0.47
LRTOMT-204ENST00000412777 ITGB4P16144 1822 aa12.11□□□□□ -0.47
LRTOMT-204ENST00000412777 PHKG2P15735 406 aa12.1□□□□□ -0.47
LRTOMT-204ENST00000412777 TXNRD1Q16881 649 aa12.1□□□□□ -0.47
LRTOMT-204ENST00000412777 AMOTQ4VCS5 1084 aa12.1□□□□□ -0.47
LRTOMT-204ENST00000412777 PLEKHO1Q53GL0 409 aaPredicted RBP12.1□□□□□ -0.47
LRTOMT-204ENST00000412777 IFNL2Q8IZJ0 200 aa12.1□□□□□ -0.47
LRTOMT-204ENST00000412777 SYTL4Q96C24 671 aaPredicted RBP12.1□□□□□ -0.47
LRTOMT-204ENST00000412777 CFAP53Q96M91 514 aa12.09□□□□□ -0.47
LRTOMT-204ENST00000412777 LY75O60449 1722 aa12.08□□□□□ -0.47
LRTOMT-204ENST00000412777 PSDA5PKW4 1024 aaPredicted RBP12.08□□□□□ -0.48
LRTOMT-204ENST00000412777 HMOX1P09601 288 aa12.08□□□□□ -0.48
LRTOMT-204ENST00000412777 R3HDM1Q15032 1099 aaKnown RBP12.08□□□□□ -0.48
LRTOMT-204ENST00000412777 NBPF14Q5TI25 921 aa12.08□□□□□ -0.48
LRTOMT-204ENST00000412777 ZNF530Q6P9A1 599 aaPredicted RBP12.08□□□□□ -0.48
LRTOMT-204ENST00000412777 RALBP1Q15311 655 aa12.07□□□□□ -0.48
LRTOMT-204ENST00000412777 ANO8Q9HCE9 1232 aaPredicted RBP12.07□□□□□ -0.48
LRTOMT-204ENST00000412777 PAPPAQ13219 1627 aa12.07□□□□□ -0.48
LRTOMT-204ENST00000412777 U2SURPO15042 1029 aaKnown RBP12.06□□□□□ -0.48
LRTOMT-204ENST00000412777 HSP90AB1P08238 724 aaKnown RBP12.06□□□□□ -0.48
LRTOMT-204ENST00000412777 MPRIPQ6WCQ1 1025 aa12.06□□□□□ -0.48
LRTOMT-204ENST00000412777 SRCAPQ6ZRS2 3230 aa12.06□□□□□ -0.48
LRTOMT-204ENST00000412777 KDM6AO15550 1401 aaPredicted RBP12.05□□□□□ -0.48
LRTOMT-204ENST00000412777 C1orf141Q5JVX7 400 aa12.05□□□□□ -0.48
LRTOMT-204ENST00000412777 SLC27A3Q5K4L6 730 aa12.05□□□□□ -0.48
LRTOMT-204ENST00000412777 PIGBQ92521 554 aa12.05□□□□□ -0.48
LRTOMT-204ENST00000412777 DCAF5Q96JK2 942 aa12.05□□□□□ -0.48
LRTOMT-204ENST00000412777 LRRC4BQ9NT99 713 aa12.05□□□□□ -0.48
LRTOMT-204ENST00000412777 NUDCQ9Y266 331 aa12.05□□□□□ -0.48
LRTOMT-204ENST00000412777 SCN11AQ9UI33 1791 aa12.05□□□□□ -0.48
LRTOMT-204ENST00000412777 VIRMAQ69YN4 1812 aaKnown RBP12.04□□□□□ -0.48
LRTOMT-204ENST00000412777 ERVV-2B6SEH9 535 aa12.04□□□□□ -0.48
LRTOMT-204ENST00000412777 TMOD3Q9NYL9 352 aa12.04□□□□□ -0.48
LRTOMT-204ENST00000412777 ZNF316A6NFI3 1004 aaPredicted RBP12.03□□□□□ -0.48
LRTOMT-204ENST00000412777 MTHFSDQ2M296 383 aaKnown RBP12.03□□□□□ -0.48
LRTOMT-204ENST00000412777 AKAP4Q5JQC9 854 aa12.03□□□□□ -0.48
LRTOMT-204ENST00000412777 SMARCC1Q92922 1105 aaPredicted RBP12.03□□□□□ -0.48
LRTOMT-204ENST00000412777 RSPH6AQ9H0K4 717 aa12.03□□□□□ -0.48
LRTOMT-204ENST00000412777 STK32BQ9NY57 414 aa12.03□□□□□ -0.48
LRTOMT-204ENST00000412777 PALLDQ8WX93 1383 aa12.03□□□□□ -0.48
LRTOMT-204ENST00000412777 LRP5O75197 1615 aa12.02□□□□□ -0.49
LRTOMT-204ENST00000412777 U2AF1L5P0DN76 240 aaPredicted RBP12.02□□□□□ -0.49
LRTOMT-204ENST00000412777 U2AF1Q01081 240 aaKnown RBP eCLIP12.02□□□□□ -0.49
LRTOMT-204ENST00000412777 SLC15A2Q16348 729 aa12.02□□□□□ -0.49
LRTOMT-204ENST00000412777 PIAS4Q8N2W9 510 aaPredicted RBP12.02□□□□□ -0.49
LRTOMT-204ENST00000412777 CCNL1Q9UK58 526 aaPredicted RBP12.02□□□□□ -0.49
LRTOMT-204ENST00000412777 CASZ1Q86V15 1759 aa12.02□□□□□ -0.49
LRTOMT-204ENST00000412777 TAF1LQ8IZX4 1826 aa12.02□□□□□ -0.49
LRTOMT-204ENST00000412777 ADAMTS7Q9UKP4 1686 aa12.01□□□□□ -0.49
LRTOMT-204ENST00000412777 PRKAR2BP31323 418 aa12.01□□□□□ -0.49
LRTOMT-204ENST00000412777 KCNQ4P56696 695 aa12.01□□□□□ -0.49
LRTOMT-204ENST00000412777 ZNF827Q17R98 1081 aa12.01□□□□□ -0.49
LRTOMT-204ENST00000412777 ASAP1Q9ULH1 1129 aa12.01□□□□□ -0.49
LRTOMT-204ENST00000412777 MYBBP1AQ9BQG0 1328 aaKnown RBP12.01□□□□□ -0.49
LRTOMT-204ENST00000412777 C5P01031 1676 aa12□□□□□ -0.49
LRTOMT-204ENST00000412777 QSER1Q2KHR3 1735 aa12□□□□□ -0.49
LRTOMT-204ENST00000412777 FCHSD2O94868 740 aa12□□□□□ -0.49
LRTOMT-204ENST00000412777 CABP4P57796 275 aa12□□□□□ -0.49
LRTOMT-204ENST00000412777 GAS2L2Q8NHY3 880 aa12□□□□□ -0.49
LRTOMT-204ENST00000412777 AKT1S1Q96B36 256 aa12□□□□□ -0.49
LRTOMT-204ENST00000412777 PHACTR3Q96KR7 559 aa12□□□□□ -0.49
LRTOMT-204ENST00000412777 PRKRIP1Q9H875 184 aaPredicted RBP12□□□□□ -0.49
LRTOMT-204ENST00000412777 ATG3Q9NT62 314 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms