RNA–Protein interactions for RNA: ENST00000411975.5

ABCA13-201, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 4,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-201ENST00000411975 YTHDC2Q9H6S0 1430 aaKnown RBP14.37□□□□□ -0.11
ABCA13-201ENST00000411975 BMP2KLQ5H9B9 411 aa14.37□□□□□ -0.11
ABCA13-201ENST00000411975 MPRIPQ6WCQ1 1025 aa14.37□□□□□ -0.11
ABCA13-201ENST00000411975 ZRANB1Q9UGI0 708 aa14.36□□□□□ -0.11
ABCA13-201ENST00000411975 FOSBP53539 338 aa14.36□□□□□ -0.11
ABCA13-201ENST00000411975 CCDC73Q6ZRK6 1079 aa14.36□□□□□ -0.11
ABCA13-201ENST00000411975 NUTM1Q86Y26 1132 aa14.36□□□□□ -0.11
ABCA13-201ENST00000411975 NOL10Q9BSC4 688 aaKnown RBP14.35□□□□□ -0.11
ABCA13-201ENST00000411975 SPINK5Q9NQ38 1064 aaPredicted RBP14.35□□□□□ -0.11
ABCA13-201ENST00000411975 RAB11FIP3O75154 756 aa14.35□□□□□ -0.11
ABCA13-201ENST00000411975 DNAAF4Q8WXU2 420 aa14.35□□□□□ -0.11
ABCA13-201ENST00000411975 NPATQ14207 1427 aa14.35□□□□□ -0.11
ABCA13-201ENST00000411975 ERICH2A1L162 156 aa14.35□□□□□ -0.11
ABCA13-201ENST00000411975 CWC27Q6UX04 472 aaKnown RBP14.35□□□□□ -0.11
ABCA13-201ENST00000411975 AEBP1Q8IUX7 1158 aa14.35□□□□□ -0.11
ABCA13-201ENST00000411975 RSPH6AQ9H0K4 717 aa14.35□□□□□ -0.11
ABCA13-201ENST00000411975 TBC1D2BQ9UPU7 963 aa14.35□□□□□ -0.11
ABCA13-201ENST00000411975 LRRFIP2Q9Y608 721 aaKnown RBP14.35□□□□□ -0.11
ABCA13-201ENST00000411975 ABCC1P33527 1531 aa14.35□□□□□ -0.11
ABCA13-201ENST00000411975 TBC1D2Q9BYX2 928 aa14.35□□□□□ -0.11
ABCA13-201ENST00000411975 AMOTL1Q8IY63 956 aa14.34□□□□□ -0.11
ABCA13-201ENST00000411975 RNF214Q8ND24 703 aa14.34□□□□□ -0.11
ABCA13-201ENST00000411975 DBF4Q9UBU7 674 aaPredicted RBP14.34□□□□□ -0.11
ABCA13-201ENST00000411975 FAM177BA6PVY3 158 aa14.34□□□□□ -0.11
ABCA13-201ENST00000411975 GLRX3O76003 335 aaKnown RBP14.34□□□□□ -0.11
ABCA13-201ENST00000411975 EIF4A2Q14240 407 aaKnown RBP14.34□□□□□ -0.11
ABCA13-201ENST00000411975 CCDC158Q5M9N0 1113 aa14.34□□□□□ -0.11
ABCA13-201ENST00000411975 LARP1Q6PKG0 1096 aaKnown RBP14.34□□□□□ -0.11
ABCA13-201ENST00000411975 ZFYVE9O95405 1425 aa14.34□□□□□ -0.11
ABCA13-201ENST00000411975 RLBP1P12271 317 aa14.34□□□□□ -0.11
ABCA13-201ENST00000411975 SASS6Q6UVJ0 657 aa14.34□□□□□ -0.11
ABCA13-201ENST00000411975 WDR33Q9C0J8 1336 aaKnown RBP14.34□□□□□ -0.11
ABCA13-201ENST00000411975 FIBPO43427 364 aa14.33□□□□□ -0.12
ABCA13-201ENST00000411975 CREBRFQ8IUR6 639 aa14.33□□□□□ -0.12
ABCA13-201ENST00000411975 BRPF3Q9ULD4 1205 aa14.33□□□□□ -0.12
ABCA13-201ENST00000411975 MYO5CQ9NQX4 1742 aa14.33□□□□□ -0.12
ABCA13-201ENST00000411975 TNNQ9UQP3 1299 aa14.33□□□□□ -0.12
ABCA13-201ENST00000411975 C8orf58Q8NAV2 365 aa14.33□□□□□ -0.12
ABCA13-201ENST00000411975 CNNM1Q9NRU3 951 aa14.33□□□□□ -0.12
ABCA13-201ENST00000411975 SAMD9LQ8IVG5 1584 aa14.32□□□□□ -0.12
ABCA13-201ENST00000411975 CCDC57Q2TAC2 916 aa14.32□□□□□ -0.12
ABCA13-201ENST00000411975 TBC1D32Q96NH3 1257 aa14.32□□□□□ -0.12
ABCA13-201ENST00000411975 INSRP06213 1382 aa14.32□□□□□ -0.12
ABCA13-201ENST00000411975 ANKRD1Q15327 319 aa14.32□□□□□ -0.12
ABCA13-201ENST00000411975 SAFBQ15424 915 aaKnown RBP eCLIP14.32□□□□□ -0.12
ABCA13-201ENST00000411975 ARID3AQ99856 593 aa14.32□□□□□ -0.12
ABCA13-201ENST00000411975 ZMYM3Q14202 1370 aa14.32□□□□□ -0.12
ABCA13-201ENST00000411975 BLOC1S2Q6QNY1 142 aa14.31□□□□□ -0.12
ABCA13-201ENST00000411975 PHACTR3Q96KR7 559 aa14.31□□□□□ -0.12
ABCA13-201ENST00000411975 CEP126Q9P2H0 1117 aa14.31□□□□□ -0.12
ABCA13-201ENST00000411975 PTPRTO14522 1441 aa14.31□□□□□ -0.12
ABCA13-201ENST00000411975 NUCB1Q02818 461 aa14.31□□□□□ -0.12
ABCA13-201ENST00000411975 TTC39AQ5SRH9 613 aa14.31□□□□□ -0.12
ABCA13-201ENST00000411975 TBC1D9Q6ZT07 1266 aa14.31□□□□□ -0.12
ABCA13-201ENST00000411975 KRT28Q7Z3Y7 464 aa14.31□□□□□ -0.12
ABCA13-201ENST00000411975 MRPL50Q8N5N7 158 aaKnown RBP14.31□□□□□ -0.12
ABCA13-201ENST00000411975 MARCH6O60337 910 aa14.31□□□□□ -0.12
ABCA13-201ENST00000411975 JAKMIP1Q96N16 626 aaKnown RBP14.31□□□□□ -0.12
ABCA13-201ENST00000411975 RNF123Q5XPI4 1314 aa14.3□□□□□ -0.12
ABCA13-201ENST00000411975 UPF3BQ9BZI7 483 aaKnown RBP14.3□□□□□ -0.12
ABCA13-201ENST00000411975 CFAP65Q6ZU64 1925 aaKnown RBP14.3□□□□□ -0.12
ABCA13-201ENST00000411975 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.3□□□□□ -0.12
ABCA13-201ENST00000411975 PTCD1O75127 700 aaKnown RBP14.3□□□□□ -0.12
ABCA13-201ENST00000411975 VAMP4O75379 141 aa14.3□□□□□ -0.12
ABCA13-201ENST00000411975 TPD52L1Q16890 204 aaPredicted RBP14.3□□□□□ -0.12
ABCA13-201ENST00000411975 HYPKQ9NX55 129 aa14.3□□□□□ -0.12
ABCA13-201ENST00000411975 PIK3R4Q99570 1358 aa14.3□□□□□ -0.12
ABCA13-201ENST00000411975 FAM43AQ8N2R8 423 aa14.29□□□□□ -0.12
ABCA13-201ENST00000411975 ZMYM4Q5VZL5 1548 aa14.29□□□□□ -0.12
ABCA13-201ENST00000411975 ATP10AO60312 1499 aa14.29□□□□□ -0.12
ABCA13-201ENST00000411975 MEIS3Q99687 375 aa14.29□□□□□ -0.12
ABCA13-201ENST00000411975 NCKAP5LQ9HCH0 1330 aa14.29□□□□□ -0.12
ABCA13-201ENST00000411975 BLMP54132 1417 aaPredicted RBP14.29□□□□□ -0.12
ABCA13-201ENST00000411975 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.29□□□□□ -0.12
ABCA13-201ENST00000411975 FLT4P35916 1363 aa14.29□□□□□ -0.12
ABCA13-201ENST00000411975 DHX16O60231 1041 aaKnown RBP14.28□□□□□ -0.12
ABCA13-201ENST00000411975 C8orf34Q49A92 452 aa14.28□□□□□ -0.12
ABCA13-201ENST00000411975 TSPYL6Q8N831 410 aa14.28□□□□□ -0.12
ABCA13-201ENST00000411975 SDF4Q9BRK5 362 aa14.28□□□□□ -0.12
ABCA13-201ENST00000411975 PDRG1Q9NUG6 133 aa14.28□□□□□ -0.12
ABCA13-201ENST00000411975 PI4KAP2A4QPH2 592 aa14.28□□□□□ -0.12
ABCA13-201ENST00000411975 LETM1O95202 739 aaPredicted RBP14.28□□□□□ -0.12
ABCA13-201ENST00000411975 PI4KAP1Q8N8J0 262 aa14.28□□□□□ -0.12
ABCA13-201ENST00000411975 HOOK1Q9UJC3 728 aaKnown RBP14.28□□□□□ -0.12
ABCA13-201ENST00000411975 SART3Q15020 963 aaKnown RBP14.28□□□□□ -0.12
ABCA13-201ENST00000411975 ZSCAN31Q96LW9 406 aaPredicted RBP14.28□□□□□ -0.12
ABCA13-201ENST00000411975 MYD88Q99836 296 aa14.28□□□□□ -0.12
ABCA13-201ENST00000411975 SBNO2Q9Y2G9 1366 aa14.27□□□□□ -0.12
ABCA13-201ENST00000411975 NEO1Q92859 1461 aa14.27□□□□□ -0.12
ABCA13-201ENST00000411975 STK3Q13188 491 aa14.27□□□□□ -0.12
ABCA13-201ENST00000411975 MEX3CQ5U5Q3 659 aaKnown RBP14.27□□□□□ -0.12
ABCA13-201ENST00000411975 ANKRD24Q8TF21 1146 aa14.27□□□□□ -0.12
ABCA13-201ENST00000411975 FKBP4Q02790 459 aaKnown RBP eCLIP14.27□□□□□ -0.13
ABCA13-201ENST00000411975 LARP1BQ659C4 914 aaKnown RBP14.27□□□□□ -0.13
ABCA13-201ENST00000411975 ANKRD44Q8N8A2 993 aa14.27□□□□□ -0.13
ABCA13-201ENST00000411975 KRT32Q14532 448 aa14.27□□□□□ -0.13
ABCA13-201ENST00000411975 TTC22Q5TAA0 569 aa14.27□□□□□ -0.13
ABCA13-201ENST00000411975 TSPY26PQ9H489 355 aa14.27□□□□□ -0.13
ABCA13-201ENST00000411975 TTC37Q6PGP7 1564 aa14.26□□□□□ -0.13
ABCA13-201ENST00000411975 PES1O00541 588 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms