RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 ANKRD24Q8TF21 1146 aa10.01□□□□□ -0.81
LSM8-202ENST00000411938 ZNF692Q9BU19 519 aaPredicted RBP10.01□□□□□ -0.81
LSM8-202ENST00000411938 NBPF1Q3BBV0 1214 aa10□□□□□ -0.81
LSM8-202ENST00000411938 C16orf71Q8IYS4 520 aaPredicted RBP10□□□□□ -0.81
LSM8-202ENST00000411938 NMRK2Q9NPI5 230 aa10□□□□□ -0.81
LSM8-202ENST00000411938 TTC21AQ8NDW8 1320 aa10□□□□□ -0.81
LSM8-202ENST00000411938 NFAT5O94916 1531 aa9.99□□□□□ -0.81
LSM8-202ENST00000411938 FLAD1Q8NFF5 587 aa9.99□□□□□ -0.81
LSM8-202ENST00000411938 ANKRD36BQ8N2N9 1353 aa9.99□□□□□ -0.81
LSM8-202ENST00000411938 RBM46Q8TBY0 533 aaKnown RBP9.98□□□□□ -0.81
LSM8-202ENST00000411938 QRICH2Q9H0J4 1663 aa9.98□□□□□ -0.81
LSM8-202ENST00000411938 USP47Q96K76 1375 aa9.98□□□□□ -0.81
LSM8-202ENST00000411938 WDR90Q96KV7 1748 aa9.97□□□□□ -0.81
LSM8-202ENST00000411938 SLC34A2O95436 690 aa9.97□□□□□ -0.81
LSM8-202ENST00000411938 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.97□□□□□ -0.81
LSM8-202ENST00000411938 LTV1Q96GA3 475 aaPredicted RBP9.97□□□□□ -0.81
LSM8-202ENST00000411938 EVC2Q86UK5 1308 aa9.97□□□□□ -0.81
LSM8-202ENST00000411938 HMGB2P26583 209 aaKnown RBP9.96□□□□□ -0.82
LSM8-202ENST00000411938 FSTL1Q12841 308 aa9.96□□□□□ -0.82
LSM8-202ENST00000411938 NSD2O96028 1365 aa9.96□□□□□ -0.82
LSM8-202ENST00000411938 KTN1Q86UP2 1357 aaKnown RBP9.96□□□□□ -0.82
LSM8-202ENST00000411938 PHF14O94880 888 aa9.95□□□□□ -0.82
LSM8-202ENST00000411938 ARHGAP27Q6ZUM4 889 aa9.95□□□□□ -0.82
LSM8-202ENST00000411938 LY75O60449 1722 aa9.95□□□□□ -0.82
LSM8-202ENST00000411938 HSPA1AP0DMV8 641 aaKnown RBP9.94□□□□□ -0.82
LSM8-202ENST00000411938 HSPA1BP0DMV9 641 aaKnown RBP9.94□□□□□ -0.82
LSM8-202ENST00000411938 NME9Q86XW9 330 aa9.94□□□□□ -0.82
LSM8-202ENST00000411938 ZCRB1Q8TBF4 217 aaKnown RBP9.94□□□□□ -0.82
LSM8-202ENST00000411938 AK7Q96M32 723 aa9.94□□□□□ -0.82
LSM8-202ENST00000411938 BCS1LQ9Y276 419 aa9.94□□□□□ -0.82
LSM8-202ENST00000411938 SMIM5Q71RC9 77 aa9.93□□□□□ -0.82
LSM8-202ENST00000411938 DOT1LQ8TEK3 1739 aa9.93□□□□□ -0.82
LSM8-202ENST00000411938 USP31Q70CQ4 1352 aa9.92□□□□□ -0.82
LSM8-202ENST00000411938 RAB3GAP2Q9H2M9 1393 aa9.92□□□□□ -0.82
LSM8-202ENST00000411938 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.92□□□□□ -0.82
LSM8-202ENST00000411938 KIAA1210Q9ULL0 1709 aa9.92□□□□□ -0.82
LSM8-202ENST00000411938 PALLDQ8WX93 1383 aa9.91□□□□□ -0.82
LSM8-202ENST00000411938 KDM2BQ8NHM5 1336 aa9.91□□□□□ -0.82
LSM8-202ENST00000411938 A0A0G2JLW4 131 aa9.91□□□□□ -0.82
LSM8-202ENST00000411938 C9orf131Q5VYM1 1079 aa9.91□□□□□ -0.82
LSM8-202ENST00000411938 AMIGO3Q86WK7 504 aa9.91□□□□□ -0.82
LSM8-202ENST00000411938 IP6K1Q92551 441 aa9.91□□□□□ -0.82
LSM8-202ENST00000411938 CICQ96RK0 1608 aaPredicted RBP9.91□□□□□ -0.82
LSM8-202ENST00000411938 PCNTO95613 3336 aa9.9□□□□□ -0.82
LSM8-202ENST00000411938 FCHSD2O94868 740 aa9.9□□□□□ -0.82
LSM8-202ENST00000411938 SMC1BQ8NDV3 1235 aa9.9□□□□□ -0.82
LSM8-202ENST00000411938 RRAGCQ9HB90 399 aa9.9□□□□□ -0.82
LSM8-202ENST00000411938 LTN1O94822 1766 aa9.9□□□□□ -0.82
LSM8-202ENST00000411938 C5P01031 1676 aa9.9□□□□□ -0.83
LSM8-202ENST00000411938 MMP10P09238 476 aa9.89□□□□□ -0.83
LSM8-202ENST00000411938 TGFB2P61812 414 aa9.89□□□□□ -0.83
LSM8-202ENST00000411938 MPRIPQ6WCQ1 1025 aa9.89□□□□□ -0.83
LSM8-202ENST00000411938 NSD3Q9BZ95 1437 aa9.89□□□□□ -0.83
LSM8-202ENST00000411938 PLEKHG2Q9H7P9 1386 aa9.88□□□□□ -0.83
LSM8-202ENST00000411938 PXDNLA1KZ92 1463 aa9.88□□□□□ -0.83
LSM8-202ENST00000411938 SSFA2P28290 1259 aa9.88□□□□□ -0.83
LSM8-202ENST00000411938 SMARCC1Q92922 1105 aaPredicted RBP9.88□□□□□ -0.83
LSM8-202ENST00000411938 KCPQ6ZWJ8 1503 aa9.87□□□□□ -0.83
LSM8-202ENST00000411938 DPEP1P16444 411 aa9.87□□□□□ -0.83
LSM8-202ENST00000411938 TMC1Q8TDI8 760 aa9.87□□□□□ -0.83
LSM8-202ENST00000411938 RNF181Q9P0P0 153 aa9.87□□□□□ -0.83
LSM8-202ENST00000411938 SBNO2Q9Y2G9 1366 aa9.87□□□□□ -0.83
LSM8-202ENST00000411938 MEGF6O75095 1541 aa9.87□□□□□ -0.83
LSM8-202ENST00000411938 USP54Q70EL1 1684 aa9.87□□□□□ -0.83
LSM8-202ENST00000411938 GNPATO15228 680 aa9.86□□□□□ -0.83
LSM8-202ENST00000411938 C4BP0C0L5 1744 aa9.86□□□□□ -0.83
LSM8-202ENST00000411938 AMPHP49418 695 aa9.86□□□□□ -0.83
LSM8-202ENST00000411938 HDGFL2Q7Z4V5 671 aaPredicted RBP9.86□□□□□ -0.83
LSM8-202ENST00000411938 RAPGEF4Q8WZA2 1011 aa9.86□□□□□ -0.83
LSM8-202ENST00000411938 PCDH10Q9P2E7 1040 aa9.86□□□□□ -0.83
LSM8-202ENST00000411938 TAF1LQ8IZX4 1826 aa9.85□□□□□ -0.83
LSM8-202ENST00000411938 USHBP1Q8N6Y0 703 aa9.85□□□□□ -0.83
LSM8-202ENST00000411938 CGNL1Q0VF96 1302 aa9.84□□□□□ -0.83
LSM8-202ENST00000411938 MAP3K19Q56UN5 1328 aa9.84□□□□□ -0.83
LSM8-202ENST00000411938 FAM208AQ9UK61 1670 aaKnown RBP9.84□□□□□ -0.83
LSM8-202ENST00000411938 C10orf71Q711Q0 1435 aa9.84□□□□□ -0.83
LSM8-202ENST00000411938 N4BP2Q86UW6 1770 aaPredicted RBP9.84□□□□□ -0.83
LSM8-202ENST00000411938 TATP17735 454 aaPredicted RBP9.84□□□□□ -0.83
LSM8-202ENST00000411938 HOXC9P31274 260 aa9.84□□□□□ -0.83
LSM8-202ENST00000411938 LINC00116Q8NCU8 138 aa9.84□□□□□ -0.83
LSM8-202ENST00000411938 CCDC87Q9NVE4 849 aa9.84□□□□□ -0.83
LSM8-202ENST00000411938 MON2Q7Z3U7 1717 aa9.84□□□□□ -0.83
LSM8-202ENST00000411938 PCDH11XQ9BZA7 1347 aa9.83□□□□□ -0.84
LSM8-202ENST00000411938 PCDH11YQ9BZA8 1340 aa9.83□□□□□ -0.84
LSM8-202ENST00000411938 UBR3Q6ZT12 1888 aa9.83□□□□□ -0.84
LSM8-202ENST00000411938 TOGARAM1Q9Y4F4 1720 aa9.83□□□□□ -0.84
LSM8-202ENST00000411938 LOC102724428A0A0B4J2F2 783 aa9.83□□□□□ -0.84
LSM8-202ENST00000411938 SIK1P57059 783 aa9.83□□□□□ -0.84
LSM8-202ENST00000411938 TMF1P82094 1093 aa9.83□□□□□ -0.84
LSM8-202ENST00000411938 NBPF6Q5VWK0 638 aa9.83□□□□□ -0.84
LSM8-202ENST00000411938 NLGN1Q8N2Q7 840 aa9.83□□□□□ -0.84
LSM8-202ENST00000411938 PIGBQ92521 554 aa9.83□□□□□ -0.84
LSM8-202ENST00000411938 NBPF4Q96M43 638 aa9.83□□□□□ -0.84
LSM8-202ENST00000411938 PIM2Q9P1W9 311 aa9.83□□□□□ -0.84
LSM8-202ENST00000411938 VEGFAP15692 232 aaPredicted RBP9.82□□□□□ -0.84
LSM8-202ENST00000411938 FBLN1P23142 703 aa9.82□□□□□ -0.84
LSM8-202ENST00000411938 FAM161AQ3B820 660 aa9.82□□□□□ -0.84
LSM8-202ENST00000411938 DALRD3Q5D0E6 543 aaKnown RBP9.82□□□□□ -0.84
LSM8-202ENST00000411938 SLC12A5Q9H2X9 1139 aa9.82□□□□□ -0.84
LSM8-202ENST00000411938 TERF2IPQ9NYB0 399 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms