RNA–Protein interactions for RNA: ENST00000410055.5

PDK1-203, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDK1, Length 2,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-203ENST00000410055 DLC1Q96QB1 1528 aa20.63■□□□□ 0.89
PDK1-203ENST00000410055 NECTIN2Q92692 538 aa20.63■□□□□ 0.89
PDK1-203ENST00000410055 HSP90AB1P08238 724 aaKnown RBP20.63■□□□□ 0.89
PDK1-203ENST00000410055 RBM42Q9BTD8 480 aaKnown RBP20.63■□□□□ 0.89
PDK1-203ENST00000410055 SMAP1Q8IYB5 467 aaPredicted RBP20.62■□□□□ 0.89
PDK1-203ENST00000410055 CDK12Q9NYV4 1490 aaPredicted RBP20.62■□□□□ 0.89
PDK1-203ENST00000410055 TBC1D9Q6ZT07 1266 aa20.61■□□□□ 0.89
PDK1-203ENST00000410055 ABCC4O15439 1325 aa20.61■□□□□ 0.89
PDK1-203ENST00000410055 C14orf37Q86TY3 774 aa20.61■□□□□ 0.89
PDK1-203ENST00000410055 LTV1Q96GA3 475 aaPredicted RBP20.61■□□□□ 0.89
PDK1-203ENST00000410055 AATKQ6ZMQ8 1374 aa20.61■□□□□ 0.89
PDK1-203ENST00000410055 SMARCA5O60264 1052 aaPredicted RBP20.61■□□□□ 0.89
PDK1-203ENST00000410055 BRPF1P55201 1214 aaPredicted RBP20.61■□□□□ 0.89
PDK1-203ENST00000410055 BMP2KLQ5H9B9 411 aa20.61■□□□□ 0.89
PDK1-203ENST00000410055 SLC4A2P04920 1241 aa20.6■□□□□ 0.89
PDK1-203ENST00000410055 CHMP5Q9NZZ3 219 aa20.6■□□□□ 0.89
PDK1-203ENST00000410055 TMEM2Q9UHN6 1383 aa20.6■□□□□ 0.89
PDK1-203ENST00000410055 AGLP35573 1532 aa20.6■□□□□ 0.89
PDK1-203ENST00000410055 AMPHP49418 695 aa20.6■□□□□ 0.89
PDK1-203ENST00000410055 KLHL34Q8N239 644 aa20.59■□□□□ 0.89
PDK1-203ENST00000410055 AMOTL2Q9Y2J4 779 aa20.59■□□□□ 0.89
PDK1-203ENST00000410055 F6X3S4 739 aa20.59■□□□□ 0.89
PDK1-203ENST00000410055 MRE11P49959 708 aa20.59■□□□□ 0.89
PDK1-203ENST00000410055 RTF1Q92541 710 aaKnown RBP20.59■□□□□ 0.89
PDK1-203ENST00000410055 GRPEL1Q9HAV7 217 aa20.59■□□□□ 0.89
PDK1-203ENST00000410055 MCM4P33991 863 aa20.58■□□□□ 0.89
PDK1-203ENST00000410055 OTUD7AQ8TE49 926 aaPredicted RBP20.58■□□□□ 0.89
PDK1-203ENST00000410055 IPO4Q8TEX9 1081 aaKnown RBP20.58■□□□□ 0.89
PDK1-203ENST00000410055 NRXN3Q9Y4C0 1643 aa20.58■□□□□ 0.88
PDK1-203ENST00000410055 EID1Q9Y6B2 187 aa20.58■□□□□ 0.88
PDK1-203ENST00000410055 R3HCC1Q9Y3T6 440 aaKnown RBP20.57■□□□□ 0.88
PDK1-203ENST00000410055 MEIS3Q99687 375 aa20.57■□□□□ 0.88
PDK1-203ENST00000410055 TSPYL4Q9UJ04 414 aa20.57■□□□□ 0.88
PDK1-203ENST00000410055 CDC42BPGQ6DT37 1551 aa20.57■□□□□ 0.88
PDK1-203ENST00000410055 PTCH1Q13635 1447 aa20.56■□□□□ 0.88
PDK1-203ENST00000410055 CD2BP2O95400 341 aaKnown RBP20.56■□□□□ 0.88
PDK1-203ENST00000410055 DLG5Q8TDM6 1919 aa20.56■□□□□ 0.88
PDK1-203ENST00000410055 ZBTB7CA1YPR0 619 aa20.56■□□□□ 0.88
PDK1-203ENST00000410055 SETD1AO15047 1707 aaKnown RBP20.56■□□□□ 0.88
PDK1-203ENST00000410055 MTHFSDQ2M296 383 aaKnown RBP20.55■□□□□ 0.88
PDK1-203ENST00000410055 ANP32BQ92688 251 aaKnown RBP20.55■□□□□ 0.88
PDK1-203ENST00000410055 RBM33Q96EV2 1170 aaKnown RBP20.55■□□□□ 0.88
PDK1-203ENST00000410055 MAP3K19Q56UN5 1328 aa20.55■□□□□ 0.88
PDK1-203ENST00000410055 CHL1O00533 1208 aa20.55■□□□□ 0.88
PDK1-203ENST00000410055 ZNF830Q96NB3 372 aaPredicted RBP20.55■□□□□ 0.88
PDK1-203ENST00000410055 MAPK8IP2Q13387 824 aaPredicted RBP20.54■□□□□ 0.88
PDK1-203ENST00000410055 G2E3Q7L622 706 aa20.54■□□□□ 0.88
PDK1-203ENST00000410055 GSPT1P15170 499 aaKnown RBP20.54■□□□□ 0.88
PDK1-203ENST00000410055 RBM25P49756 843 aaKnown RBP20.54■□□□□ 0.88
PDK1-203ENST00000410055 NLRP6P59044 892 aa20.54■□□□□ 0.88
PDK1-203ENST00000410055 PPP4R3BQ5MIZ7 849 aa20.54■□□□□ 0.88
PDK1-203ENST00000410055 PLEKHM2Q8IWE5 1019 aa20.53■□□□□ 0.88
PDK1-203ENST00000410055 TRAK2O60296 914 aa20.52■□□□□ 0.88
PDK1-203ENST00000410055 SIRT1Q96EB6 747 aa20.52■□□□□ 0.88
PDK1-203ENST00000410055 TMEM51Q9NW97 253 aa20.52■□□□□ 0.87
PDK1-203ENST00000410055 CDC45O75419 566 aa20.51■□□□□ 0.87
PDK1-203ENST00000410055 MSH6P52701 1360 aa20.51■□□□□ 0.87
PDK1-203ENST00000410055 DCTPP1Q9H773 170 aa20.51■□□□□ 0.87
PDK1-203ENST00000410055 PIK3R4Q99570 1358 aa20.51■□□□□ 0.87
PDK1-203ENST00000410055 ADAMTS13Q76LX8 1427 aa20.5■□□□□ 0.87
PDK1-203ENST00000410055 PLEKHG3A1L390 1219 aa20.5■□□□□ 0.87
PDK1-203ENST00000410055 INTS3Q68E01 1043 aaKnown RBP20.5■□□□□ 0.87
PDK1-203ENST00000410055 MAP7D2Q96T17 732 aa20.5■□□□□ 0.87
PDK1-203ENST00000410055 KIF2CQ99661 725 aa20.5■□□□□ 0.87
PDK1-203ENST00000410055 DMTNQ08495 405 aa20.49■□□□□ 0.87
PDK1-203ENST00000410055 CEP85Q6P2H3 762 aa20.49■□□□□ 0.87
PDK1-203ENST00000410055 EYA1Q99502 592 aa20.49■□□□□ 0.87
PDK1-203ENST00000410055 USP6P35125 1406 aa20.49■□□□□ 0.87
PDK1-203ENST00000410055 TSHZ3Q63HK5 1081 aa20.48■□□□□ 0.87
PDK1-203ENST00000410055 USHBP1Q8N6Y0 703 aa20.48■□□□□ 0.87
PDK1-203ENST00000410055 ANKRD44Q8N8A2 993 aa20.48■□□□□ 0.87
PDK1-203ENST00000410055 REREQ9P2R6 1566 aa20.48■□□□□ 0.87
PDK1-203ENST00000410055 HAP1P54257 671 aaPredicted RBP20.48■□□□□ 0.87
PDK1-203ENST00000410055 ZBTB22O15209 634 aa20.47■□□□□ 0.87
PDK1-203ENST00000410055 TNPO1Q92973 898 aaKnown RBP20.47■□□□□ 0.87
PDK1-203ENST00000410055 TECPR2O15040 1411 aa20.47■□□□□ 0.87
PDK1-203ENST00000410055 UQCRHLA0A096LP55 91 aa20.46■□□□□ 0.87
PDK1-203ENST00000410055 UQCRHP07919 91 aa20.46■□□□□ 0.87
PDK1-203ENST00000410055 EXOC6BQ9Y2D4 811 aa20.46■□□□□ 0.87
PDK1-203ENST00000410055 ITSN1Q15811 1721 aa20.46■□□□□ 0.87
PDK1-203ENST00000410055 OFD1O75665 1012 aa20.46■□□□□ 0.87
PDK1-203ENST00000410055 FKBP5Q13451 457 aaPredicted RBP20.46■□□□□ 0.87
PDK1-203ENST00000410055 TTC22Q5TAA0 569 aa20.46■□□□□ 0.87
PDK1-203ENST00000410055 PTPRUQ92729 1446 aa20.45■□□□□ 0.86
PDK1-203ENST00000410055 ABTB2Q8N961 1025 aa20.45■□□□□ 0.86
PDK1-203ENST00000410055 STK31Q9BXU1 1019 aa20.45■□□□□ 0.86
PDK1-203ENST00000410055 ZSCAN20P17040 1043 aaPredicted RBP20.45■□□□□ 0.86
PDK1-203ENST00000410055 RPAP2Q8IXW5 612 aaPredicted RBP20.45■□□□□ 0.86
PDK1-203ENST00000410055 MON2Q7Z3U7 1717 aa20.44■□□□□ 0.86
PDK1-203ENST00000410055 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.44■□□□□ 0.86
PDK1-203ENST00000410055 K7ELQ4 463 aaPredicted RBP20.44■□□□□ 0.86
PDK1-203ENST00000410055 NCLP19338 710 aaKnown RBP20.44■□□□□ 0.86
PDK1-203ENST00000410055 SDSP20132 328 aa20.44■□□□□ 0.86
PDK1-203ENST00000410055 GAS2L2Q8NHY3 880 aa20.44■□□□□ 0.86
PDK1-203ENST00000410055 SNX21Q969T3 373 aa20.44■□□□□ 0.86
PDK1-203ENST00000410055 C3P01024 1663 aa20.43■□□□□ 0.86
PDK1-203ENST00000410055 OVOS2A0A0J9YW53 1432 aa20.43■□□□□ 0.86
PDK1-203ENST00000410055 OVOS2Q6IE36 1432 aa20.43■□□□□ 0.86
PDK1-203ENST00000410055 RTL1A6NKG5 1358 aa20.43■□□□□ 0.86
PDK1-203ENST00000410055 GAS2L3Q86XJ1 694 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms