RNA–Protein interactions for RNA: ENST00000410004.1

TMEM139-205, Transcript of transmembrane protein 139, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM139, Length 2,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-205ENST00000410004 SLIT3O75094 1523 aa20.21■□□□□ 0.83
TMEM139-205ENST00000410004 ZKSCAN2Q63HK3 967 aa20.21■□□□□ 0.83
TMEM139-205ENST00000410004 MVPQ14764 893 aaKnown RBP20.2■□□□□ 0.82
TMEM139-205ENST00000410004 BRINP3Q76B58 766 aa20.2■□□□□ 0.82
TMEM139-205ENST00000410004 BCL2L13Q9BXK5 485 aa20.2■□□□□ 0.82
TMEM139-205ENST00000410004 SLAIN2Q9P270 581 aa20.2■□□□□ 0.82
TMEM139-205ENST00000410004 PCDHB15Q9Y5E8 787 aa20.2■□□□□ 0.82
TMEM139-205ENST00000410004 MTHFSDQ2M296 383 aaKnown RBP20.2■□□□□ 0.82
TMEM139-205ENST00000410004 ZNF853P0CG23 659 aa20.19■□□□□ 0.82
TMEM139-205ENST00000410004 CFAP44Q96MT7 982 aa20.19■□□□□ 0.82
TMEM139-205ENST00000410004 DLG5Q8TDM6 1919 aa20.19■□□□□ 0.82
TMEM139-205ENST00000410004 BECN1Q14457 450 aa20.18■□□□□ 0.82
TMEM139-205ENST00000410004 GSE1Q14687 1217 aa20.18■□□□□ 0.82
TMEM139-205ENST00000410004 MCM10Q7L590 875 aa20.17■□□□□ 0.82
TMEM139-205ENST00000410004 DZIP1LQ8IYY4 767 aaKnown RBP20.17■□□□□ 0.82
TMEM139-205ENST00000410004 UPF2Q9HAU5 1272 aaKnown RBP20.17■□□□□ 0.82
TMEM139-205ENST00000410004 MBIPQ9NS73 344 aa20.17■□□□□ 0.82
TMEM139-205ENST00000410004 NBPF6Q5VWK0 638 aa20.17■□□□□ 0.82
TMEM139-205ENST00000410004 FTSJ3Q8IY81 847 aaKnown RBP20.17■□□□□ 0.82
TMEM139-205ENST00000410004 USHBP1Q8N6Y0 703 aa20.17■□□□□ 0.82
TMEM139-205ENST00000410004 GAS2L2Q8NHY3 880 aa20.17■□□□□ 0.82
TMEM139-205ENST00000410004 NBPF4Q96M43 638 aa20.17■□□□□ 0.82
TMEM139-205ENST00000410004 ALS2Q96Q42 1657 aa20.16■□□□□ 0.82
TMEM139-205ENST00000410004 ZC3H6P61129 1189 aaKnown RBP20.15■□□□□ 0.82
TMEM139-205ENST00000410004 PDZRN3Q9UPQ7 1066 aa20.15■□□□□ 0.82
TMEM139-205ENST00000410004 PHRF1Q9P1Y6 1649 aaKnown RBP20.15■□□□□ 0.82
TMEM139-205ENST00000410004 TNS3Q68CZ2 1445 aa20.15■□□□□ 0.82
TMEM139-205ENST00000410004 PXDNQ92626 1479 aa20.14■□□□□ 0.82
TMEM139-205ENST00000410004 SPATA31A3Q5VYP0 1347 aa20.14■□□□□ 0.82
TMEM139-205ENST00000410004 SSH1Q8WYL5 1049 aa20.14■□□□□ 0.81
TMEM139-205ENST00000410004 RTF1Q92541 710 aaKnown RBP20.14■□□□□ 0.81
TMEM139-205ENST00000410004 SMC4Q9NTJ3 1288 aa20.14■□□□□ 0.81
TMEM139-205ENST00000410004 TNNQ9UQP3 1299 aa20.14■□□□□ 0.81
TMEM139-205ENST00000410004 AXIN2Q9Y2T1 843 aa20.14■□□□□ 0.81
TMEM139-205ENST00000410004 MED1Q15648 1581 aaPredicted RBP20.13■□□□□ 0.81
TMEM139-205ENST00000410004 CABLES1Q8TDN4 633 aa20.13■□□□□ 0.81
TMEM139-205ENST00000410004 LRRC59Q96AG4 307 aaKnown RBP20.13■□□□□ 0.81
TMEM139-205ENST00000410004 DDX19BQ9UMR2 479 aa20.12■□□□□ 0.81
TMEM139-205ENST00000410004 ANKRD24Q8TF21 1146 aa20.12■□□□□ 0.81
TMEM139-205ENST00000410004 SEC24BO95487 1268 aa20.11■□□□□ 0.81
TMEM139-205ENST00000410004 HDAC1Q13547 482 aaPredicted RBP20.11■□□□□ 0.81
TMEM139-205ENST00000410004 TSPYL6Q8N831 410 aa20.11■□□□□ 0.81
TMEM139-205ENST00000410004 ZNF428Q96B54 188 aa20.11■□□□□ 0.81
TMEM139-205ENST00000410004 ELL2O00472 640 aaPredicted RBP20.1■□□□□ 0.81
TMEM139-205ENST00000410004 VAMP4O75379 141 aa20.1■□□□□ 0.81
TMEM139-205ENST00000410004 ALDH1L2Q3SY69 923 aa20.1■□□□□ 0.81
TMEM139-205ENST00000410004 GNAT3A8MTJ3 354 aa20.09■□□□□ 0.81
TMEM139-205ENST00000410004 CHL1O00533 1208 aa20.09■□□□□ 0.81
TMEM139-205ENST00000410004 HTATSF1O43719 755 aaKnown RBP20.09■□□□□ 0.81
TMEM139-205ENST00000410004 ATF7IPQ6VMQ6 1270 aa20.09■□□□□ 0.81
TMEM139-205ENST00000410004 TBC1D32Q96NH3 1257 aa20.09■□□□□ 0.81
TMEM139-205ENST00000410004 KIF16BQ96L93 1317 aa20.09■□□□□ 0.81
TMEM139-205ENST00000410004 TRIM27P14373 513 aa20.08■□□□□ 0.81
TMEM139-205ENST00000410004 TWISTNBQ3B726 338 aaPredicted RBP20.08■□□□□ 0.81
TMEM139-205ENST00000410004 C8orf58Q8NAV2 365 aa20.08■□□□□ 0.81
TMEM139-205ENST00000410004 SOS2Q07890 1332 aaPredicted RBP20.08■□□□□ 0.81
TMEM139-205ENST00000410004 CRB1P82279 1406 aa20.07■□□□□ 0.8
TMEM139-205ENST00000410004 IPO8O15397 1037 aaKnown RBP20.07■□□□□ 0.8
TMEM139-205ENST00000410004 NOB1Q9ULX3 412 aaKnown RBP20.07■□□□□ 0.8
TMEM139-205ENST00000410004 ERBB3P21860 1342 aa20.06■□□□□ 0.8
TMEM139-205ENST00000410004 FRAT2O75474 233 aaPredicted RBP20.05■□□□□ 0.8
TMEM139-205ENST00000410004 MIS18AQ9NYP9 233 aa20.05■□□□□ 0.8
TMEM139-205ENST00000410004 MAP3K5Q99683 1374 aa20.05■□□□□ 0.8
TMEM139-205ENST00000410004 BRPF1P55201 1214 aaPredicted RBP20.03■□□□□ 0.8
TMEM139-205ENST00000410004 CHRNA2Q15822 529 aa20.03■□□□□ 0.8
TMEM139-205ENST00000410004 ITPRIPQ8IWB1 547 aa20.03■□□□□ 0.8
TMEM139-205ENST00000410004 IL17REQ8NFR9 667 aa20.03■□□□□ 0.8
TMEM139-205ENST00000410004 RGPD2P0DJD1 1756 aa20.03■□□□□ 0.8
TMEM139-205ENST00000410004 PLEKHO1Q53GL0 409 aaPredicted RBP20.02■□□□□ 0.8
TMEM139-205ENST00000410004 SMC5Q8IY18 1101 aa20.02■□□□□ 0.8
TMEM139-205ENST00000410004 TSPYL4Q9UJ04 414 aa20.02■□□□□ 0.8
TMEM139-205ENST00000410004 NCAPD2Q15021 1401 aa20.02■□□□□ 0.8
TMEM139-205ENST00000410004 KIAA0232Q92628 1395 aa20.02■□□□□ 0.8
TMEM139-205ENST00000410004 KRT24Q2M2I5 525 aa20.02■□□□□ 0.79
TMEM139-205ENST00000410004 AMOTQ4VCS5 1084 aa20.01■□□□□ 0.79
TMEM139-205ENST00000410004 MRPL50Q8N5N7 158 aaKnown RBP20.01■□□□□ 0.79
TMEM139-205ENST00000410004 CPDO75976 1380 aa20.01■□□□□ 0.79
TMEM139-205ENST00000410004 NLRP2Q9NX02 1062 aa20■□□□□ 0.79
TMEM139-205ENST00000410004 HAP1P54257 671 aaPredicted RBP20■□□□□ 0.79
TMEM139-205ENST00000410004 CHMP4BQ9H444 224 aaKnown RBP20■□□□□ 0.79
TMEM139-205ENST00000410004 ZBTB40Q9NUA8 1239 aa20■□□□□ 0.79
TMEM139-205ENST00000410004 RGPD5Q99666 1765 aa20■□□□□ 0.79
TMEM139-205ENST00000410004 CSB-PGBD3P0DP91 1061 aa19.99■□□□□ 0.79
TMEM139-205ENST00000410004 ZNF530Q6P9A1 599 aaPredicted RBP19.99■□□□□ 0.79
TMEM139-205ENST00000410004 TMEM57Q8N5G2 664 aa19.99■□□□□ 0.79
TMEM139-205ENST00000410004 TAF7Q15545 349 aaPredicted RBP19.98■□□□□ 0.79
TMEM139-205ENST00000410004 AKAP4Q5JQC9 854 aa19.98■□□□□ 0.79
TMEM139-205ENST00000410004 ANTXR1Q9H6X2 564 aa19.98■□□□□ 0.79
TMEM139-205ENST00000410004 CRYBG1Q9Y4K1 1723 aa19.97■□□□□ 0.79
TMEM139-205ENST00000410004 COL18A1P39060 1754 aa19.97■□□□□ 0.79
TMEM139-205ENST00000410004 IL27Q8NEV9 243 aa19.96■□□□□ 0.79
TMEM139-205ENST00000410004 ARHGAP45Q92619 1136 aa19.96■□□□□ 0.79
TMEM139-205ENST00000410004 TBC1D2Q9BYX2 928 aa19.96■□□□□ 0.79
TMEM139-205ENST00000410004 LGR6Q9HBX8 967 aa19.96■□□□□ 0.79
TMEM139-205ENST00000410004 PRDM11Q9NQV5 511 aa19.96■□□□□ 0.79
TMEM139-205ENST00000410004 C1orf141Q5JVX7 400 aa19.96■□□□□ 0.79
TMEM139-205ENST00000410004 RAPGEF4Q8WZA2 1011 aa19.96■□□□□ 0.79
TMEM139-205ENST00000410004 CAMTA1Q9Y6Y1 1673 aa19.95■□□□□ 0.78
TMEM139-205ENST00000410004 BABAM1Q9NWV8 329 aa19.95■□□□□ 0.78
TMEM139-205ENST00000410004 CEMIPQ8WUJ3 1361 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms