RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 RRP1P56182 461 aaKnown RBP18.5■□□□□ 0.55
MINDY4-202ENST00000409881 LARP1Q6PKG0 1096 aaKnown RBP18.5■□□□□ 0.55
MINDY4-202ENST00000409881 BACH2Q9BYV9 841 aa18.5■□□□□ 0.55
MINDY4-202ENST00000409881 RUNDC1Q96C34 613 aa18.49■□□□□ 0.55
MINDY4-202ENST00000409881 MAPK8IP3Q9UPT6 1336 aa18.49■□□□□ 0.55
MINDY4-202ENST00000409881 PNNQ9H307 717 aaKnown RBP18.49■□□□□ 0.55
MINDY4-202ENST00000409881 BRPF3Q9ULD4 1205 aa18.48■□□□□ 0.55
MINDY4-202ENST00000409881 KDRP35968 1356 aa18.48■□□□□ 0.55
MINDY4-202ENST00000409881 FAM208AQ9UK61 1670 aaKnown RBP18.48■□□□□ 0.55
MINDY4-202ENST00000409881 PLEKHF1Q96S99 279 aa18.48■□□□□ 0.55
MINDY4-202ENST00000409881 SLIT2O94813 1529 aa18.47■□□□□ 0.55
MINDY4-202ENST00000409881 APAF1O14727 1248 aa18.47■□□□□ 0.55
MINDY4-202ENST00000409881 PHACTR3Q96KR7 559 aa18.45■□□□□ 0.54
MINDY4-202ENST00000409881 CRB1P82279 1406 aa18.45■□□□□ 0.54
MINDY4-202ENST00000409881 NRAPQ86VF7 1730 aa18.45■□□□□ 0.54
MINDY4-202ENST00000409881 NWD2Q9ULI1 1742 aa18.45■□□□□ 0.54
MINDY4-202ENST00000409881 TCP11L2Q8N4U5 519 aa18.45■□□□□ 0.54
MINDY4-202ENST00000409881 NCAPD2Q15021 1401 aa18.45■□□□□ 0.54
MINDY4-202ENST00000409881 RRP7AQ9Y3A4 280 aaKnown RBP18.44■□□□□ 0.54
MINDY4-202ENST00000409881 CARD10Q9BWT7 1032 aa18.44■□□□□ 0.54
MINDY4-202ENST00000409881 NEUROD2Q15784 382 aa18.43■□□□□ 0.54
MINDY4-202ENST00000409881 UNC5CLQ8IV45 518 aa18.43■□□□□ 0.54
MINDY4-202ENST00000409881 FNBP4Q8N3X1 1017 aaPredicted RBP18.43■□□□□ 0.54
MINDY4-202ENST00000409881 USP21Q9UK80 565 aa18.43■□□□□ 0.54
MINDY4-202ENST00000409881 RCAN3Q9UKA8 241 aa18.43■□□□□ 0.54
MINDY4-202ENST00000409881 CCDC9Q9Y3X0 531 aaKnown RBP18.43■□□□□ 0.54
MINDY4-202ENST00000409881 MS4A1P11836 297 aa18.42■□□□□ 0.54
MINDY4-202ENST00000409881 SKAP1Q86WV1 359 aa18.42■□□□□ 0.54
MINDY4-202ENST00000409881 RAPGEF4Q8WZA2 1011 aa18.42■□□□□ 0.54
MINDY4-202ENST00000409881 AFF2P51816 1311 aa18.42■□□□□ 0.54
MINDY4-202ENST00000409881 BCL9LQ86UU0 1499 aa18.42■□□□□ 0.54
MINDY4-202ENST00000409881 GSE1Q14687 1217 aa18.4■□□□□ 0.54
MINDY4-202ENST00000409881 MEGF6O75095 1541 aa18.4■□□□□ 0.54
MINDY4-202ENST00000409881 TATP17735 454 aaPredicted RBP18.4■□□□□ 0.54
MINDY4-202ENST00000409881 TMPOP42166 694 aaKnown RBP18.4■□□□□ 0.54
MINDY4-202ENST00000409881 NFE2L2Q16236 605 aa18.39■□□□□ 0.53
MINDY4-202ENST00000409881 MTHFSDQ2M296 383 aaKnown RBP18.38■□□□□ 0.53
MINDY4-202ENST00000409881 SPATA31A1Q5TZJ5 1347 aa18.38■□□□□ 0.53
MINDY4-202ENST00000409881 RIPK4P57078 832 aa18.38■□□□□ 0.53
MINDY4-202ENST00000409881 SPATA31A5Q5VU36 1347 aa18.37■□□□□ 0.53
MINDY4-202ENST00000409881 SPATA31A7Q8IWB4 1347 aa18.37■□□□□ 0.53
MINDY4-202ENST00000409881 IL2RBP14784 551 aa18.37■□□□□ 0.53
MINDY4-202ENST00000409881 SLC4A3P48751 1232 aa18.37■□□□□ 0.53
MINDY4-202ENST00000409881 VPS72Q15906 364 aa18.37■□□□□ 0.53
MINDY4-202ENST00000409881 PLEKHO1Q53GL0 409 aaPredicted RBP18.37■□□□□ 0.53
MINDY4-202ENST00000409881 NFKBIBQ15653 356 aa18.36■□□□□ 0.53
MINDY4-202ENST00000409881 GAS2L2Q8NHY3 880 aa18.36■□□□□ 0.53
MINDY4-202ENST00000409881 DDRGK1Q96HY6 314 aa18.35■□□□□ 0.53
MINDY4-202ENST00000409881 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.35■□□□□ 0.53
MINDY4-202ENST00000409881 AMOTQ4VCS5 1084 aa18.35■□□□□ 0.53
MINDY4-202ENST00000409881 UBE2Q2Q8WVN8 375 aa18.35■□□□□ 0.53
MINDY4-202ENST00000409881 EIF5BO60841 1220 aaKnown RBP18.34■□□□□ 0.53
MINDY4-202ENST00000409881 FRAT1Q92837 279 aaPredicted RBP18.34■□□□□ 0.53
MINDY4-202ENST00000409881 OVOS2A0A0G2JMS6 1433 aa18.34■□□□□ 0.53
MINDY4-202ENST00000409881 PLIN1O60240 522 aa18.34■□□□□ 0.53
MINDY4-202ENST00000409881 ZNF530Q6P9A1 599 aaPredicted RBP18.34■□□□□ 0.53
MINDY4-202ENST00000409881 PARP4Q9UKK3 1724 aaKnown RBP18.33■□□□□ 0.53
MINDY4-202ENST00000409881 NGEFQ8N5V2 710 aa18.33■□□□□ 0.52
MINDY4-202ENST00000409881 SPG7Q9UQ90 795 aa18.33■□□□□ 0.52
MINDY4-202ENST00000409881 TRIM35Q9UPQ4 493 aa18.32■□□□□ 0.52
MINDY4-202ENST00000409881 THRAP3Q9Y2W1 955 aaKnown RBP18.32■□□□□ 0.52
MINDY4-202ENST00000409881 WWC1Q8IX03 1113 aa18.32■□□□□ 0.52
MINDY4-202ENST00000409881 TRPC5Q9UL62 973 aaPredicted RBP18.32■□□□□ 0.52
MINDY4-202ENST00000409881 DISP2A7MBM2 1401 aa18.32■□□□□ 0.52
MINDY4-202ENST00000409881 ILDR1Q86SU0 546 aaPredicted RBP18.31■□□□□ 0.52
MINDY4-202ENST00000409881 C1orf141Q5JVX7 400 aa18.31■□□□□ 0.52
MINDY4-202ENST00000409881 ZCRB1Q8TBF4 217 aaKnown RBP18.31■□□□□ 0.52
MINDY4-202ENST00000409881 CDCA7LQ96GN5 454 aa18.31■□□□□ 0.52
MINDY4-202ENST00000409881 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.31■□□□□ 0.52
MINDY4-202ENST00000409881 ATRNO75882 1429 aa18.31■□□□□ 0.52
MINDY4-202ENST00000409881 DLG5Q8TDM6 1919 aa18.31■□□□□ 0.52
MINDY4-202ENST00000409881 LMOD3Q0VAK6 560 aa18.3■□□□□ 0.52
MINDY4-202ENST00000409881 FAM98CQ17RN3 349 aaKnown RBP18.3■□□□□ 0.52
MINDY4-202ENST00000409881 CCDC27Q2M243 656 aa18.3■□□□□ 0.52
MINDY4-202ENST00000409881 MAP3K5Q99683 1374 aa18.3■□□□□ 0.52
MINDY4-202ENST00000409881 PLEKHG2Q9H7P9 1386 aa18.3■□□□□ 0.52
MINDY4-202ENST00000409881 GNAT3A8MTJ3 354 aa18.3■□□□□ 0.52
MINDY4-202ENST00000409881 DCTN1Q14203 1278 aa18.3■□□□□ 0.52
MINDY4-202ENST00000409881 QTRT2Q9H974 415 aaKnown RBP18.3■□□□□ 0.52
MINDY4-202ENST00000409881 WNK3Q9BYP7 1800 aa18.29■□□□□ 0.52
MINDY4-202ENST00000409881 BARGINQ6ZT62 677 aa18.29■□□□□ 0.52
MINDY4-202ENST00000409881 RTF1Q92541 710 aaKnown RBP18.29■□□□□ 0.52
MINDY4-202ENST00000409881 GJD4Q96KN9 370 aaPredicted RBP18.29■□□□□ 0.52
MINDY4-202ENST00000409881 THUMPD2Q9BTF0 503 aaKnown RBP18.29■□□□□ 0.52
MINDY4-202ENST00000409881 PHF23Q9BUL5 403 aaPredicted RBP18.29■□□□□ 0.52
MINDY4-202ENST00000409881 PKD1L3Q7Z443 1732 aa18.29■□□□□ 0.52
MINDY4-202ENST00000409881 NCBP3Q53F19 620 aaKnown RBP18.29■□□□□ 0.52
MINDY4-202ENST00000409881 MCM10Q7L590 875 aa18.29■□□□□ 0.52
MINDY4-202ENST00000409881 CDCA7Q9BWT1 371 aaPredicted RBP18.29■□□□□ 0.52
MINDY4-202ENST00000409881 ZNF521Q96K83 1311 aa18.29■□□□□ 0.52
MINDY4-202ENST00000409881 A0A0G2JS52 829 aa18.28■□□□□ 0.52
MINDY4-202ENST00000409881 AKAP4Q5JQC9 854 aa18.28■□□□□ 0.52
MINDY4-202ENST00000409881 CRBNQ96SW2 442 aa18.28■□□□□ 0.52
MINDY4-202ENST00000409881 ZNF772Q68DY9 489 aaPredicted RBP18.28■□□□□ 0.52
MINDY4-202ENST00000409881 DDX54Q8TDD1 881 aaKnown RBP18.28■□□□□ 0.52
MINDY4-202ENST00000409881 PCDH11XQ9BZA7 1347 aa18.28■□□□□ 0.52
MINDY4-202ENST00000409881 PCDH11YQ9BZA8 1340 aa18.28■□□□□ 0.52
MINDY4-202ENST00000409881 GLI3P10071 1580 aa18.27■□□□□ 0.52
MINDY4-202ENST00000409881 CYP27B1O15528 508 aa18.27■□□□□ 0.51
MINDY4-202ENST00000409881 PHKG2P15735 406 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms