RNA–Protein interactions for RNA: ENST00000409825.5

TTC7A-204, Transcript of tetratricopeptide repeat domain 7A, humanhuman

TSL 1 (best)

Gene TTC7A, Length 4,739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC7A-204ENST00000409825 IFFO2Q5TF58 517 aa18.23■□□□□ 0.51
TTC7A-204ENST00000409825 TMOD2Q9NZR1 351 aa18.23■□□□□ 0.51
TTC7A-204ENST00000409825 SF3A1Q15459 793 aaKnown RBP18.22■□□□□ 0.51
TTC7A-204ENST00000409825 ZSCAN25Q6NSZ9 544 aa18.22■□□□□ 0.51
TTC7A-204ENST00000409825 DNAJC2Q99543 621 aaKnown RBP18.22■□□□□ 0.51
TTC7A-204ENST00000409825 HECW2Q9P2P5 1572 aa18.22■□□□□ 0.51
TTC7A-204ENST00000409825 TMEM94Q12767 1356 aa18.22■□□□□ 0.51
TTC7A-204ENST00000409825 PLEKHG1Q9ULL1 1385 aa18.22■□□□□ 0.51
TTC7A-204ENST00000409825 SAMD9LQ8IVG5 1584 aa18.22■□□□□ 0.51
TTC7A-204ENST00000409825 SRGAP3O43295 1099 aa18.22■□□□□ 0.51
TTC7A-204ENST00000409825 EFCAB6Q5THR3 1501 aa18.21■□□□□ 0.51
TTC7A-204ENST00000409825 SART3Q15020 963 aaKnown RBP18.21■□□□□ 0.51
TTC7A-204ENST00000409825 PPP1R42Q7Z4L9 355 aa18.21■□□□□ 0.51
TTC7A-204ENST00000409825 ACSBG1Q96GR2 724 aa18.21■□□□□ 0.51
TTC7A-204ENST00000409825 RBM5P52756 815 aaKnown RBP eCLIP18.2■□□□□ 0.5
TTC7A-204ENST00000409825 SIL1Q9H173 461 aa18.2■□□□□ 0.5
TTC7A-204ENST00000409825 NOP58Q9Y2X3 529 aaKnown RBP18.2■□□□□ 0.5
TTC7A-204ENST00000409825 ALDH1L2Q3SY69 923 aa18.2■□□□□ 0.5
TTC7A-204ENST00000409825 NACAP1Q9BZK3 213 aa18.2■□□□□ 0.5
TTC7A-204ENST00000409825 CCAR1Q8IX12 1150 aaKnown RBP18.2■□□□□ 0.5
TTC7A-204ENST00000409825 MYD88Q99836 296 aa18.2■□□□□ 0.5
TTC7A-204ENST00000409825 ATP6V1AP38606 617 aa18.19■□□□□ 0.5
TTC7A-204ENST00000409825 PIK3C2GO75747 1445 aa18.19■□□□□ 0.5
TTC7A-204ENST00000409825 UGGT1Q9NYU2 1555 aa18.19■□□□□ 0.5
TTC7A-204ENST00000409825 IFIT1P09914 478 aaKnown RBP18.19■□□□□ 0.5
TTC7A-204ENST00000409825 NCBP3Q53F19 620 aaKnown RBP18.19■□□□□ 0.5
TTC7A-204ENST00000409825 RPAP2Q8IXW5 612 aaPredicted RBP18.19■□□□□ 0.5
TTC7A-204ENST00000409825 TTC37Q6PGP7 1564 aa18.19■□□□□ 0.5
TTC7A-204ENST00000409825 POLD1P28340 1107 aa18.18■□□□□ 0.5
TTC7A-204ENST00000409825 SYAP1Q96A49 352 aaPredicted RBP18.18■□□□□ 0.5
TTC7A-204ENST00000409825 LRRCC1Q9C099 1032 aa18.18■□□□□ 0.5
TTC7A-204ENST00000409825 USP21Q9UK80 565 aa18.18■□□□□ 0.5
TTC7A-204ENST00000409825 AKAP2Q9Y2D5 859 aa18.18■□□□□ 0.5
TTC7A-204ENST00000409825 ATP6V1DQ9Y5K8 247 aa18.18■□□□□ 0.5
TTC7A-204ENST00000409825 ARAP3Q8WWN8 1544 aa18.18■□□□□ 0.5
TTC7A-204ENST00000409825 PCDH11XQ9BZA7 1347 aa18.18■□□□□ 0.5
TTC7A-204ENST00000409825 PCDH11YQ9BZA8 1340 aa18.18■□□□□ 0.5
TTC7A-204ENST00000409825 EIF4A2Q14240 407 aaKnown RBP18.18■□□□□ 0.5
TTC7A-204ENST00000409825 DNAAF4Q8WXU2 420 aa18.18■□□□□ 0.5
TTC7A-204ENST00000409825 POLKQ9UBT6 870 aa18.18■□□□□ 0.5
TTC7A-204ENST00000409825 SLFN5Q08AF3 891 aa18.18■□□□□ 0.5
TTC7A-204ENST00000409825 IFIT5Q13325 482 aaKnown RBP18.18■□□□□ 0.5
TTC7A-204ENST00000409825 DCAF5Q96JK2 942 aa18.18■□□□□ 0.5
TTC7A-204ENST00000409825 PHF14O94880 888 aa18.17■□□□□ 0.5
TTC7A-204ENST00000409825 METTL24Q5JXM2 366 aa18.17■□□□□ 0.5
TTC7A-204ENST00000409825 CAVIN4Q5BKX8 364 aa18.17■□□□□ 0.5
TTC7A-204ENST00000409825 PLEKHG3A1L390 1219 aa18.17■□□□□ 0.5
TTC7A-204ENST00000409825 ST5P78524 1137 aa18.17■□□□□ 0.5
TTC7A-204ENST00000409825 IKQ13123 557 aaPredicted RBP18.17■□□□□ 0.5
TTC7A-204ENST00000409825 SAMD1Q6SPF0 538 aaPredicted RBP18.17■□□□□ 0.5
TTC7A-204ENST00000409825 ZBTB3Q9H5J0 574 aa18.16■□□□□ 0.5
TTC7A-204ENST00000409825 TESK2Q96S53 571 aa18.16■□□□□ 0.5
TTC7A-204ENST00000409825 CDC5LQ99459 802 aaKnown RBP18.16■□□□□ 0.5
TTC7A-204ENST00000409825 CCDC85AQ96PX6 553 aaPredicted RBP18.16■□□□□ 0.5
TTC7A-204ENST00000409825 ZFYVE9O95405 1425 aa18.16■□□□□ 0.5
TTC7A-204ENST00000409825 CDC45O75419 566 aa18.15■□□□□ 0.5
TTC7A-204ENST00000409825 BCAR3O75815 825 aa18.15■□□□□ 0.5
TTC7A-204ENST00000409825 ANKIB1Q9P2G1 1089 aa18.15■□□□□ 0.5
TTC7A-204ENST00000409825 MAP3K19Q56UN5 1328 aa18.15■□□□□ 0.5
TTC7A-204ENST00000409825 HOXC9P31274 260 aa18.15■□□□□ 0.5
TTC7A-204ENST00000409825 MVPQ14764 893 aaKnown RBP18.15■□□□□ 0.5
TTC7A-204ENST00000409825 ASXL1Q8IXJ9 1541 aa18.15■□□□□ 0.5
TTC7A-204ENST00000409825 DDX46Q7L014 1031 aaKnown RBP18.15■□□□□ 0.5
TTC7A-204ENST00000409825 EDC4Q6P2E9 1401 aaKnown RBP18.15■□□□□ 0.5
TTC7A-204ENST00000409825 AMER1Q5JTC6 1135 aaPredicted RBP18.15■□□□□ 0.5
TTC7A-204ENST00000409825 A0A1W2PP64 1363 aa18.15■□□□□ 0.5
TTC7A-204ENST00000409825 TFCP2L1Q9NZI6 479 aa18.14■□□□□ 0.5
TTC7A-204ENST00000409825 ZRANB1Q9UGI0 708 aa18.14■□□□□ 0.5
TTC7A-204ENST00000409825 FBLN1P23142 703 aa18.14■□□□□ 0.49
TTC7A-204ENST00000409825 NBPF6Q5VWK0 638 aa18.14■□□□□ 0.49
TTC7A-204ENST00000409825 NBPF5PQ86XG9 351 aaPredicted RBP18.14■□□□□ 0.49
TTC7A-204ENST00000409825 NBPF4Q96M43 638 aa18.14■□□□□ 0.49
TTC7A-204ENST00000409825 C1orf115Q9H7X2 142 aa18.14■□□□□ 0.49
TTC7A-204ENST00000409825 CLASP1Q7Z460 1538 aa18.14■□□□□ 0.49
TTC7A-204ENST00000409825 IL16Q14005 1332 aa18.14■□□□□ 0.49
TTC7A-204ENST00000409825 PSMA5P28066 241 aa18.14■□□□□ 0.49
TTC7A-204ENST00000409825 ANKRD18BA2A2Z9 1011 aa18.14■□□□□ 0.49
TTC7A-204ENST00000409825 GPTP24298 496 aa18.14■□□□□ 0.49
TTC7A-204ENST00000409825 RTCBQ9Y3I0 505 aaKnown RBP18.14■□□□□ 0.49
TTC7A-204ENST00000409825 SLKQ9H2G2 1235 aaPredicted RBP18.13■□□□□ 0.49
TTC7A-204ENST00000409825 PIK3R4Q99570 1358 aa18.13■□□□□ 0.49
TTC7A-204ENST00000409825 PREX2Q70Z35 1606 aa18.13■□□□□ 0.49
TTC7A-204ENST00000409825 COL17A1Q9UMD9 1497 aaPredicted RBP18.13■□□□□ 0.49
TTC7A-204ENST00000409825 SAFBQ15424 915 aaKnown RBP eCLIP18.13■□□□□ 0.49
TTC7A-204ENST00000409825 SETDB2Q96T68 719 aa18.13■□□□□ 0.49
TTC7A-204ENST00000409825 CWC25Q9NXE8 425 aaPredicted RBP18.13■□□□□ 0.49
TTC7A-204ENST00000409825 STK32BQ9NY57 414 aa18.13■□□□□ 0.49
TTC7A-204ENST00000409825 RAI14Q9P0K7 980 aa18.12■□□□□ 0.49
TTC7A-204ENST00000409825 LRP2BPQ9P2M1 347 aa18.12■□□□□ 0.49
TTC7A-204ENST00000409825 AACSQ86V21 672 aa18.12■□□□□ 0.49
TTC7A-204ENST00000409825 ZSCAN29Q8IWY8 852 aaPredicted RBP18.12■□□□□ 0.49
TTC7A-204ENST00000409825 WDHD1O75717 1129 aaPredicted RBP18.11■□□□□ 0.49
TTC7A-204ENST00000409825 FLIIQ13045 1269 aa18.11■□□□□ 0.49
TTC7A-204ENST00000409825 PTPRCP08575 1304 aa18.11■□□□□ 0.49
TTC7A-204ENST00000409825 ERVK-7P63135 1459 aa18.11■□□□□ 0.49
TTC7A-204ENST00000409825 TPM4P67936 248 aa18.11■□□□□ 0.49
TTC7A-204ENST00000409825 XBP1P17861 261 aa18.11■□□□□ 0.49
TTC7A-204ENST00000409825 EYA1Q99502 592 aa18.11■□□□□ 0.49
TTC7A-204ENST00000409825 FANCIQ9NVI1 1328 aa18.11■□□□□ 0.49
TTC7A-204ENST00000409825 BAG6P46379 1132 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms