RNA–Protein interactions for RNA: ENST00000409681.1

POLR1A-203, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5 BASIC

Gene POLR1A, Length 6,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-203ENST00000409681 PPP1R42Q7Z4L9 355 aa12.31□□□□□ -0.44
POLR1A-203ENST00000409681 DCAF5Q96JK2 942 aa12.31□□□□□ -0.44
POLR1A-203ENST00000409681 PLXNC1O60486 1568 aa12.3□□□□□ -0.44
POLR1A-203ENST00000409681 CDCA7LQ96GN5 454 aa12.3□□□□□ -0.44
POLR1A-203ENST00000409681 TESK2Q96S53 571 aa12.3□□□□□ -0.44
POLR1A-203ENST00000409681 RAD21O60216 631 aa12.3□□□□□ -0.44
POLR1A-203ENST00000409681 HOXC9P31274 260 aa12.3□□□□□ -0.44
POLR1A-203ENST00000409681 CNTROBQ8N137 903 aa12.3□□□□□ -0.44
POLR1A-203ENST00000409681 EIF4A2Q14240 407 aaKnown RBP12.3□□□□□ -0.44
POLR1A-203ENST00000409681 GCC1Q96CN9 775 aa12.3□□□□□ -0.44
POLR1A-203ENST00000409681 MIS18AQ9NYP9 233 aa12.3□□□□□ -0.44
POLR1A-203ENST00000409681 POLD1P28340 1107 aa12.3□□□□□ -0.44
POLR1A-203ENST00000409681 DCTN1Q14203 1278 aa12.3□□□□□ -0.44
POLR1A-203ENST00000409681 IL16Q14005 1332 aa12.29□□□□□ -0.44
POLR1A-203ENST00000409681 ATP6V1AP38606 617 aa12.29□□□□□ -0.44
POLR1A-203ENST00000409681 ZSCAN25Q6NSZ9 544 aa12.29□□□□□ -0.44
POLR1A-203ENST00000409681 POLKQ9UBT6 870 aa12.29□□□□□ -0.44
POLR1A-203ENST00000409681 TRMT112Q9UI30 125 aaKnown RBP12.29□□□□□ -0.44
POLR1A-203ENST00000409681 ST5P78524 1137 aa12.29□□□□□ -0.44
POLR1A-203ENST00000409681 ZNF772Q68DY9 489 aaPredicted RBP12.29□□□□□ -0.44
POLR1A-203ENST00000409681 ACSBG1Q96GR2 724 aa12.29□□□□□ -0.44
POLR1A-203ENST00000409681 SBNO1A3KN83 1393 aa12.29□□□□□ -0.44
POLR1A-203ENST00000409681 GOLGA6L6A8MZA4 724 aa12.29□□□□□ -0.44
POLR1A-203ENST00000409681 INTS3Q68E01 1043 aaKnown RBP12.29□□□□□ -0.44
POLR1A-203ENST00000409681 PTMSP20962 102 aa12.28□□□□□ -0.44
POLR1A-203ENST00000409681 THUMPD2Q9BTF0 503 aaKnown RBP12.28□□□□□ -0.44
POLR1A-203ENST00000409681 FSD1Q9BTV5 496 aa12.28□□□□□ -0.44
POLR1A-203ENST00000409681 SLFN5Q08AF3 891 aa12.28□□□□□ -0.44
POLR1A-203ENST00000409681 AMER1Q5JTC6 1135 aaPredicted RBP12.28□□□□□ -0.44
POLR1A-203ENST00000409681 VPS53Q5VIR6 699 aa12.28□□□□□ -0.44
POLR1A-203ENST00000409681 RALYLQ86SE5 291 aaKnown RBP12.28□□□□□ -0.44
POLR1A-203ENST00000409681 CSPP1Q1MSJ5 1256 aa12.28□□□□□ -0.44
POLR1A-203ENST00000409681 AKAP2Q9Y2D5 859 aa12.27□□□□□ -0.44
POLR1A-203ENST00000409681 MAP3K19Q56UN5 1328 aa12.27□□□□□ -0.44
POLR1A-203ENST00000409681 GLI2P10070 1586 aa12.27□□□□□ -0.44
POLR1A-203ENST00000409681 DHX16O60231 1041 aaKnown RBP12.27□□□□□ -0.44
POLR1A-203ENST00000409681 MYD88Q99836 296 aa12.27□□□□□ -0.44
POLR1A-203ENST00000409681 PTPRTO14522 1441 aa12.27□□□□□ -0.45
POLR1A-203ENST00000409681 TMOD2Q9NZR1 351 aa12.27□□□□□ -0.45
POLR1A-203ENST00000409681 STK32BQ9NY57 414 aa12.27□□□□□ -0.45
POLR1A-203ENST00000409681 RPAP2Q8IXW5 612 aaPredicted RBP12.26□□□□□ -0.45
POLR1A-203ENST00000409681 DNAAF4Q8WXU2 420 aa12.26□□□□□ -0.45
POLR1A-203ENST00000409681 TRPC5Q9UL62 973 aaPredicted RBP12.26□□□□□ -0.45
POLR1A-203ENST00000409681 MYOM2P54296 1465 aa12.26□□□□□ -0.45
POLR1A-203ENST00000409681 CLSTN1O94985 981 aa12.26□□□□□ -0.45
POLR1A-203ENST00000409681 PHF14O94880 888 aa12.26□□□□□ -0.45
POLR1A-203ENST00000409681 RASSF8Q8NHQ8 419 aa12.26□□□□□ -0.45
POLR1A-203ENST00000409681 ZRANB1Q9UGI0 708 aa12.26□□□□□ -0.45
POLR1A-203ENST00000409681 ZNF335Q9H4Z2 1342 aaPredicted RBP12.26□□□□□ -0.45
POLR1A-203ENST00000409681 SRGAP3O43295 1099 aa12.26□□□□□ -0.45
POLR1A-203ENST00000409681 IFIT1P09914 478 aaKnown RBP12.25□□□□□ -0.45
POLR1A-203ENST00000409681 FAM184AQ8NB25 1140 aa12.25□□□□□ -0.45
POLR1A-203ENST00000409681 LNPKQ9C0E8 428 aa12.25□□□□□ -0.45
POLR1A-203ENST00000409681 RTCBQ9Y3I0 505 aaKnown RBP12.25□□□□□ -0.45
POLR1A-203ENST00000409681 POLR3AO14802 1390 aaPredicted RBP12.25□□□□□ -0.45
POLR1A-203ENST00000409681 CDC5LQ99459 802 aaKnown RBP12.25□□□□□ -0.45
POLR1A-203ENST00000409681 DNAJC2Q99543 621 aaKnown RBP12.25□□□□□ -0.45
POLR1A-203ENST00000409681 LRRCC1Q9C099 1032 aa12.25□□□□□ -0.45
POLR1A-203ENST00000409681 ANO2Q9NQ90 1003 aa12.25□□□□□ -0.45
POLR1A-203ENST00000409681 TCEAL9Q9UHQ7 104 aa12.25□□□□□ -0.45
POLR1A-203ENST00000409681 PTPRCP08575 1304 aa12.25□□□□□ -0.45
POLR1A-203ENST00000409681 IFIT5Q13325 482 aaKnown RBP12.25□□□□□ -0.45
POLR1A-203ENST00000409681 CAVIN4Q5BKX8 364 aa12.25□□□□□ -0.45
POLR1A-203ENST00000409681 NACAP1Q9BZK3 213 aa12.25□□□□□ -0.45
POLR1A-203ENST00000409681 METP08581 1390 aa12.25□□□□□ -0.45
POLR1A-203ENST00000409681 CPLX1O14810 134 aa12.25□□□□□ -0.45
POLR1A-203ENST00000409681 NRDCO43847 1150 aa12.25□□□□□ -0.45
POLR1A-203ENST00000409681 BAG6P46379 1132 aa12.25□□□□□ -0.45
POLR1A-203ENST00000409681 TRIM29Q14134 588 aa12.25□□□□□ -0.45
POLR1A-203ENST00000409681 FAM161AQ3B820 660 aa12.25□□□□□ -0.45
POLR1A-203ENST00000409681 NFXL1Q6ZNB6 911 aa12.25□□□□□ -0.45
POLR1A-203ENST00000409681 GBP4Q96PP9 640 aa12.25□□□□□ -0.45
POLR1A-203ENST00000409681 CDC42BPAQ5VT25 1732 aa12.25□□□□□ -0.45
POLR1A-203ENST00000409681 NBR1Q14596 966 aa12.25□□□□□ -0.45
POLR1A-203ENST00000409681 SART3Q15020 963 aaKnown RBP12.25□□□□□ -0.45
POLR1A-203ENST00000409681 TFCP2L1Q9NZI6 479 aa12.25□□□□□ -0.45
POLR1A-203ENST00000409681 TET3O43151 1660 aa12.24□□□□□ -0.45
POLR1A-203ENST00000409681 RBM5P52756 815 aaKnown RBP eCLIP12.24□□□□□ -0.45
POLR1A-203ENST00000409681 DDX46Q7L014 1031 aaKnown RBP12.24□□□□□ -0.45
POLR1A-203ENST00000409681 FAM135BQ49AJ0 1406 aa12.24□□□□□ -0.45
POLR1A-203ENST00000409681 MVPQ14764 893 aaKnown RBP12.24□□□□□ -0.45
POLR1A-203ENST00000409681 EYA1Q99502 592 aa12.24□□□□□ -0.45
POLR1A-203ENST00000409681 ANKRD18BA2A2Z9 1011 aa12.24□□□□□ -0.45
POLR1A-203ENST00000409681 METTL24Q5JXM2 366 aa12.24□□□□□ -0.45
POLR1A-203ENST00000409681 NBPF6Q5VWK0 638 aa12.24□□□□□ -0.45
POLR1A-203ENST00000409681 NBPF5PQ86XG9 351 aaPredicted RBP12.24□□□□□ -0.45
POLR1A-203ENST00000409681 NBPF4Q96M43 638 aa12.24□□□□□ -0.45
POLR1A-203ENST00000409681 SETDB2Q96T68 719 aa12.24□□□□□ -0.45
POLR1A-203ENST00000409681 CWC25Q9NXE8 425 aaPredicted RBP12.24□□□□□ -0.45
POLR1A-203ENST00000409681 SIL1Q9H173 461 aa12.23□□□□□ -0.45
POLR1A-203ENST00000409681 ANKIB1Q9P2G1 1089 aa12.23□□□□□ -0.45
POLR1A-203ENST00000409681 MAP3K5Q99683 1374 aa12.23□□□□□ -0.45
POLR1A-203ENST00000409681 ZBTB3Q9H5J0 574 aa12.23□□□□□ -0.45
POLR1A-203ENST00000409681 SBNO2Q9Y2G9 1366 aa12.23□□□□□ -0.45
POLR1A-203ENST00000409681 NYXQ9GZU5 481 aa12.23□□□□□ -0.45
POLR1A-203ENST00000409681 FAM98CQ17RN3 349 aaKnown RBP12.23□□□□□ -0.45
POLR1A-203ENST00000409681 CFAP65Q6ZU64 1925 aaKnown RBP12.23□□□□□ -0.45
POLR1A-203ENST00000409681 FANCIQ9NVI1 1328 aa12.23□□□□□ -0.45
POLR1A-203ENST00000409681 H3BQV1 296 aa12.22□□□□□ -0.45
POLR1A-203ENST00000409681 IFFO2Q5TF58 517 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms