RNA–Protein interactions for RNA: ENST00000409583.5

ITGB6-202, Transcript of integrin subunit beta 6, humanhuman

TSL 3

Gene ITGB6, Length 4,500 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB6-202ENST00000409583 MTMR7Q9Y216 660 aa10.98□□□□□ -0.65
ITGB6-202ENST00000409583 CBX1P83916 185 aa10.97□□□□□ -0.65
ITGB6-202ENST00000409583 TEX35Q5T0J7 233 aa10.97□□□□□ -0.65
ITGB6-202ENST00000409583 SAMD1Q6SPF0 538 aaPredicted RBP10.97□□□□□ -0.65
ITGB6-202ENST00000409583 CREBRFQ8IUR6 639 aa10.97□□□□□ -0.65
ITGB6-202ENST00000409583 NRDCO43847 1150 aa10.97□□□□□ -0.65
ITGB6-202ENST00000409583 AKAP17AQ02040 695 aaKnown RBP10.97□□□□□ -0.65
ITGB6-202ENST00000409583 SYNE3Q6ZMZ3 975 aa10.97□□□□□ -0.65
ITGB6-202ENST00000409583 ANKRD24Q8TF21 1146 aa10.97□□□□□ -0.65
ITGB6-202ENST00000409583 GCC1Q96CN9 775 aa10.97□□□□□ -0.65
ITGB6-202ENST00000409583 KDM4AO75164 1064 aa10.97□□□□□ -0.65
ITGB6-202ENST00000409583 PPIP5K1Q6PFW1 1433 aa10.97□□□□□ -0.65
ITGB6-202ENST00000409583 CNTROBQ8N137 903 aa10.97□□□□□ -0.65
ITGB6-202ENST00000409583 SYAP1Q96A49 352 aaPredicted RBP10.97□□□□□ -0.65
ITGB6-202ENST00000409583 LRRCC1Q9C099 1032 aa10.96□□□□□ -0.65
ITGB6-202ENST00000409583 IFT57Q9NWB7 429 aa10.96□□□□□ -0.65
ITGB6-202ENST00000409583 TMOD3Q9NYL9 352 aa10.96□□□□□ -0.65
ITGB6-202ENST00000409583 POLKQ9UBT6 870 aa10.96□□□□□ -0.65
ITGB6-202ENST00000409583 SAMD9Q5K651 1589 aa10.96□□□□□ -0.65
ITGB6-202ENST00000409583 DHX16O60231 1041 aaKnown RBP10.96□□□□□ -0.65
ITGB6-202ENST00000409583 CCDC173Q0VFZ6 552 aa10.96□□□□□ -0.65
ITGB6-202ENST00000409583 PPP4R3BQ5MIZ7 849 aa10.96□□□□□ -0.65
ITGB6-202ENST00000409583 CPLX2Q6PUV4 134 aaKnown RBP10.96□□□□□ -0.65
ITGB6-202ENST00000409583 LRRC59Q96AG4 307 aaKnown RBP10.96□□□□□ -0.65
ITGB6-202ENST00000409583 GTPBP4Q9BZE4 634 aaKnown RBP10.96□□□□□ -0.66
ITGB6-202ENST00000409583 SPINK5Q9NQ38 1064 aaPredicted RBP10.96□□□□□ -0.66
ITGB6-202ENST00000409583 ANKRD36BQ8N2N9 1353 aa10.96□□□□□ -0.66
ITGB6-202ENST00000409583 SHANK2Q9UPX8 1470 aa10.96□□□□□ -0.66
ITGB6-202ENST00000409583 MARCH6O60337 910 aa10.96□□□□□ -0.66
ITGB6-202ENST00000409583 NEK4P51957 841 aa10.96□□□□□ -0.66
ITGB6-202ENST00000409583 NFXL1Q6ZNB6 911 aa10.96□□□□□ -0.66
ITGB6-202ENST00000409583 NASPP49321 788 aaPredicted RBP10.95□□□□□ -0.66
ITGB6-202ENST00000409583 AMOTQ4VCS5 1084 aa10.95□□□□□ -0.66
ITGB6-202ENST00000409583 RALYLQ86SE5 291 aaKnown RBP10.95□□□□□ -0.66
ITGB6-202ENST00000409583 DNMT1P26358 1616 aaKnown RBP10.95□□□□□ -0.66
ITGB6-202ENST00000409583 KIF20AO95235 890 aa10.95□□□□□ -0.66
ITGB6-202ENST00000409583 TRIM27P14373 513 aa10.95□□□□□ -0.66
ITGB6-202ENST00000409583 GPS2Q13227 327 aa10.95□□□□□ -0.66
ITGB6-202ENST00000409583 CCDC57Q2TAC2 916 aa10.95□□□□□ -0.66
ITGB6-202ENST00000409583 CHD1LQ86WJ1 897 aa10.95□□□□□ -0.66
ITGB6-202ENST00000409583 STK11IPQ8N1F8 1099 aa10.95□□□□□ -0.66
ITGB6-202ENST00000409583 SMARCA5O60264 1052 aaPredicted RBP10.95□□□□□ -0.66
ITGB6-202ENST00000409583 MBIPQ9NS73 344 aa10.95□□□□□ -0.66
ITGB6-202ENST00000409583 MPHOSPH8Q99549 860 aa10.94□□□□□ -0.66
ITGB6-202ENST00000409583 GRPEL1Q9HAV7 217 aa10.94□□□□□ -0.66
ITGB6-202ENST00000409583 ATP7AQ04656 1500 aa10.94□□□□□ -0.66
ITGB6-202ENST00000409583 AACSQ86V21 672 aa10.94□□□□□ -0.66
ITGB6-202ENST00000409583 ZSCAN30Q86W11 494 aa10.94□□□□□ -0.66
ITGB6-202ENST00000409583 AMOTL1Q8IY63 956 aa10.94□□□□□ -0.66
ITGB6-202ENST00000409583 RRAGDQ9NQL2 400 aaPredicted RBP10.94□□□□□ -0.66
ITGB6-202ENST00000409583 NUTM1Q86Y26 1132 aa10.94□□□□□ -0.66
ITGB6-202ENST00000409583 ZBTB3Q9H5J0 574 aa10.94□□□□□ -0.66
ITGB6-202ENST00000409583 MSH6P52701 1360 aa10.93□□□□□ -0.66
ITGB6-202ENST00000409583 TRAK2O60296 914 aa10.93□□□□□ -0.66
ITGB6-202ENST00000409583 FKBP4Q02790 459 aaKnown RBP eCLIP10.93□□□□□ -0.66
ITGB6-202ENST00000409583 EIF4A2Q14240 407 aaKnown RBP10.93□□□□□ -0.66
ITGB6-202ENST00000409583 MYD88Q99836 296 aa10.93□□□□□ -0.66
ITGB6-202ENST00000409583 TRIM34Q9BYJ4 488 aa10.93□□□□□ -0.66
ITGB6-202ENST00000409583 CALCOCO1Q9P1Z2 691 aa10.93□□□□□ -0.66
ITGB6-202ENST00000409583 SMC3Q9UQE7 1217 aa10.93□□□□□ -0.66
ITGB6-202ENST00000409583 YEATS2Q9ULM3 1422 aa10.93□□□□□ -0.66
ITGB6-202ENST00000409583 FAM193AP78312 1265 aa10.93□□□□□ -0.66
ITGB6-202ENST00000409583 CWC15Q9P013 229 aaKnown RBP10.93□□□□□ -0.66
ITGB6-202ENST00000409583 UBAP1LF5GYI3 381 aa10.93□□□□□ -0.66
ITGB6-202ENST00000409583 STARD3NLO95772 234 aa10.93□□□□□ -0.66
ITGB6-202ENST00000409583 SLC39A6Q13433 755 aa10.93□□□□□ -0.66
ITGB6-202ENST00000409583 JARID2Q92833 1246 aaPredicted RBP10.93□□□□□ -0.66
ITGB6-202ENST00000409583 NSD2O96028 1365 aa10.93□□□□□ -0.66
ITGB6-202ENST00000409583 ABCC11Q96J66 1382 aa10.93□□□□□ -0.66
ITGB6-202ENST00000409583 EXOC5O00471 708 aa10.92□□□□□ -0.66
ITGB6-202ENST00000409583 AXDND1Q5T1B0 1012 aaPredicted RBP10.92□□□□□ -0.66
ITGB6-202ENST00000409583 ORAI2Q96SN7 254 aa10.92□□□□□ -0.66
ITGB6-202ENST00000409583 BACH2Q9BYV9 841 aa10.92□□□□□ -0.66
ITGB6-202ENST00000409583 A0A1W2PP64 1363 aa10.92□□□□□ -0.66
ITGB6-202ENST00000409583 PER1O15534 1290 aaPredicted RBP10.92□□□□□ -0.66
ITGB6-202ENST00000409583 GPTP24298 496 aa10.92□□□□□ -0.66
ITGB6-202ENST00000409583 FLIIQ13045 1269 aa10.92□□□□□ -0.66
ITGB6-202ENST00000409583 CHMP5Q9NZZ3 219 aa10.92□□□□□ -0.66
ITGB6-202ENST00000409583 CEP126Q9P2H0 1117 aa10.92□□□□□ -0.66
ITGB6-202ENST00000409583 NKTRP30414 1462 aaKnown RBP10.92□□□□□ -0.66
ITGB6-202ENST00000409583 RRP12Q5JTH9 1297 aaKnown RBP10.92□□□□□ -0.66
ITGB6-202ENST00000409583 C19orf44Q9H6X5 657 aa10.92□□□□□ -0.66
ITGB6-202ENST00000409583 TBC1D2BQ9UPU7 963 aa10.92□□□□□ -0.66
ITGB6-202ENST00000409583 DMRT2Q9Y5R5 561 aa10.92□□□□□ -0.66
ITGB6-202ENST00000409583 NPHP3Q7Z494 1330 aa10.92□□□□□ -0.66
ITGB6-202ENST00000409583 PIP4K2AP48426 406 aaPredicted RBP10.92□□□□□ -0.66
ITGB6-202ENST00000409583 KRT24Q2M2I5 525 aa10.92□□□□□ -0.66
ITGB6-202ENST00000409583 ERC1Q8IUD2 1116 aa10.92□□□□□ -0.66
ITGB6-202ENST00000409583 PHACTR3Q96KR7 559 aa10.92□□□□□ -0.66
ITGB6-202ENST00000409583 DEF6Q9H4E7 631 aa10.92□□□□□ -0.66
ITGB6-202ENST00000409583 NINLQ9Y2I6 1382 aa10.91□□□□□ -0.66
ITGB6-202ENST00000409583 ATP5J2-PTCD1G3V325 749 aa10.91□□□□□ -0.66
ITGB6-202ENST00000409583 RPAP2Q8IXW5 612 aaPredicted RBP10.91□□□□□ -0.66
ITGB6-202ENST00000409583 YTHDC2Q9H6S0 1430 aaKnown RBP10.91□□□□□ -0.66
ITGB6-202ENST00000409583 IFNL2Q8IZJ0 200 aa10.91□□□□□ -0.66
ITGB6-202ENST00000409583 TBX22Q9Y458 520 aa10.91□□□□□ -0.66
ITGB6-202ENST00000409583 ATP6V1DQ9Y5K8 247 aa10.91□□□□□ -0.66
ITGB6-202ENST00000409583 UHRF1BP1Q6BDS2 1440 aa10.91□□□□□ -0.66
ITGB6-202ENST00000409583 CCDC158Q5M9N0 1113 aa10.91□□□□□ -0.66
ITGB6-202ENST00000409583 TTC39AQ5SRH9 613 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms