RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 MTHFSP49914 203 aa28.07■■■□□ 2.08
C4orf48-201ENST00000409248 ZCRB1Q8TBF4 217 aaKnown RBP28.07■■■□□ 2.08
C4orf48-201ENST00000409248 IGSF1Q8N6C5 1336 aa28.06■■■□□ 2.08
C4orf48-201ENST00000409248 RGPD3A6NKT7 1758 aaPredicted RBP28.05■■■□□ 2.08
C4orf48-201ENST00000409248 RGPD4Q7Z3J3 1758 aa28.05■■■□□ 2.08
C4orf48-201ENST00000409248 PLEKHG2Q9H7P9 1386 aa28.05■■■□□ 2.08
C4orf48-201ENST00000409248 PARD3Q8TEW0 1356 aa28.04■■■□□ 2.08
C4orf48-201ENST00000409248 DDX54Q8TDD1 881 aaKnown RBP28.04■■■□□ 2.08
C4orf48-201ENST00000409248 PCDH11XQ9BZA7 1347 aa28.03■■■□□ 2.08
C4orf48-201ENST00000409248 PCDH11YQ9BZA8 1340 aa28.03■■■□□ 2.08
C4orf48-201ENST00000409248 APBA3O96018 575 aa28.03■■■□□ 2.08
C4orf48-201ENST00000409248 BCL11BQ9C0K0 894 aaPredicted RBP28.03■■■□□ 2.08
C4orf48-201ENST00000409248 DOT1LQ8TEK3 1739 aa28.01■■■□□ 2.07
C4orf48-201ENST00000409248 EN1Q05925 392 aaPredicted RBP28■■■□□ 2.07
C4orf48-201ENST00000409248 RREB1Q92766 1687 aa27.99■■■□□ 2.07
C4orf48-201ENST00000409248 COL3A1P02461 1466 aaPredicted RBP27.98■■■□□ 2.07
C4orf48-201ENST00000409248 IL13P35225 146 aa27.98■■■□□ 2.07
C4orf48-201ENST00000409248 SPG7Q9UQ90 795 aa27.98■■■□□ 2.07
C4orf48-201ENST00000409248 RALBP1Q15311 655 aa27.97■■■□□ 2.07
C4orf48-201ENST00000409248 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.97■■■□□ 2.07
C4orf48-201ENST00000409248 BTAF1O14981 1849 aa27.96■■■□□ 2.07
C4orf48-201ENST00000409248 KAT6BQ8WYB5 2073 aa27.96■■■□□ 2.07
C4orf48-201ENST00000409248 DIAPH1O60610 1272 aaKnown RBP27.95■■■□□ 2.06
C4orf48-201ENST00000409248 ACSBG1Q96GR2 724 aa27.95■■■□□ 2.06
C4orf48-201ENST00000409248 CFAP53Q96M91 514 aa27.95■■■□□ 2.06
C4orf48-201ENST00000409248 KDRP35968 1356 aa27.95■■■□□ 2.06
C4orf48-201ENST00000409248 CAMKK2Q96RR4 588 aa27.94■■■□□ 2.06
C4orf48-201ENST00000409248 NUP188Q5SRE5 1749 aa27.93■■■□□ 2.06
C4orf48-201ENST00000409248 EZH2Q15910 746 aaKnown RBP27.93■■■□□ 2.06
C4orf48-201ENST00000409248 ANP32CO43423 234 aa27.92■■■□□ 2.06
C4orf48-201ENST00000409248 PPP2R1AP30153 589 aa27.92■■■□□ 2.06
C4orf48-201ENST00000409248 PLSCR1O15162 318 aa27.91■■■□□ 2.06
C4orf48-201ENST00000409248 KCNQ2O43526 872 aa27.91■■■□□ 2.06
C4orf48-201ENST00000409248 SULT6B1Q6IMI4 303 aa27.91■■■□□ 2.06
C4orf48-201ENST00000409248 PTF1AQ7RTS3 328 aa27.91■■■□□ 2.06
C4orf48-201ENST00000409248 PRKRIP1Q9H875 184 aaPredicted RBP27.91■■■□□ 2.06
C4orf48-201ENST00000409248 CYP27B1O15528 508 aa27.9■■■□□ 2.06
C4orf48-201ENST00000409248 AEBP1Q8IUX7 1158 aa27.9■■■□□ 2.06
C4orf48-201ENST00000409248 DIEXFQ68CQ4 756 aaKnown RBP27.88■■■□□ 2.05
C4orf48-201ENST00000409248 TOGARAM1Q9Y4F4 1720 aa27.88■■■□□ 2.05
C4orf48-201ENST00000409248 AMOTQ4VCS5 1084 aa27.87■■■□□ 2.05
C4orf48-201ENST00000409248 PLEKHO1Q53GL0 409 aaPredicted RBP27.87■■■□□ 2.05
C4orf48-201ENST00000409248 SYTL4Q96C24 671 aaPredicted RBP27.87■■■□□ 2.05
C4orf48-201ENST00000409248 IFNL2Q8IZJ0 200 aa27.86■■■□□ 2.05
C4orf48-201ENST00000409248 PRIM1P49642 420 aaKnown RBP27.85■■■□□ 2.05
C4orf48-201ENST00000409248 MYBBP1AQ9BQG0 1328 aaKnown RBP27.85■■■□□ 2.05
C4orf48-201ENST00000409248 NKX1-1Q15270 411 aaPredicted RBP27.84■■■□□ 2.05
C4orf48-201ENST00000409248 U2SURPO15042 1029 aaKnown RBP27.83■■■□□ 2.05
C4orf48-201ENST00000409248 PHKG2P15735 406 aa27.83■■■□□ 2.05
C4orf48-201ENST00000409248 ITGB4P16144 1822 aa27.83■■■□□ 2.05
C4orf48-201ENST00000409248 HMOX1P09601 288 aa27.82■■■□□ 2.04
C4orf48-201ENST00000409248 ZNF530Q6P9A1 599 aaPredicted RBP27.82■■■□□ 2.04
C4orf48-201ENST00000409248 NUDCQ9Y266 331 aa27.82■■■□□ 2.04
C4orf48-201ENST00000409248 HSP90AB1P08238 724 aaKnown RBP27.81■■■□□ 2.04
C4orf48-201ENST00000409248 C1orf141Q5JVX7 400 aa27.79■■■□□ 2.04
C4orf48-201ENST00000409248 TXNRD1Q16881 649 aa27.78■■■□□ 2.04
C4orf48-201ENST00000409248 NBPF14Q5TI25 921 aa27.78■■■□□ 2.04
C4orf48-201ENST00000409248 LY75O60449 1722 aa27.78■■■□□ 2.04
C4orf48-201ENST00000409248 DCAF5Q96JK2 942 aa27.75■■■□□ 2.03
C4orf48-201ENST00000409248 MPRIPQ6WCQ1 1025 aa27.74■■■□□ 2.03
C4orf48-201ENST00000409248 PROM2Q8N271 834 aa27.73■■■□□ 2.03
C4orf48-201ENST00000409248 TMOD3Q9NYL9 352 aa27.73■■■□□ 2.03
C4orf48-201ENST00000409248 KDM6AO15550 1401 aaPredicted RBP27.73■■■□□ 2.03
C4orf48-201ENST00000409248 PAPPAQ13219 1627 aa27.72■■■□□ 2.03
C4orf48-201ENST00000409248 SLC27A3Q5K4L6 730 aa27.72■■■□□ 2.03
C4orf48-201ENST00000409248 SCN11AQ9UI33 1791 aa27.72■■■□□ 2.03
C4orf48-201ENST00000409248 U2AF1L5P0DN76 240 aaPredicted RBP27.71■■■□□ 2.03
C4orf48-201ENST00000409248 U2AF1Q01081 240 aaKnown RBP eCLIP27.71■■■□□ 2.03
C4orf48-201ENST00000409248 R3HDM1Q15032 1099 aaKnown RBP27.71■■■□□ 2.03
C4orf48-201ENST00000409248 PSDA5PKW4 1024 aaPredicted RBP27.7■■■□□ 2.02
C4orf48-201ENST00000409248 AKAP4Q5JQC9 854 aa27.7■■■□□ 2.02
C4orf48-201ENST00000409248 ERVV-2B6SEH9 535 aa27.69■■■□□ 2.02
C4orf48-201ENST00000409248 SMARCC1Q92922 1105 aaPredicted RBP27.69■■■□□ 2.02
C4orf48-201ENST00000409248 PALLDQ8WX93 1383 aa27.69■■■□□ 2.02
C4orf48-201ENST00000409248 VIRMAQ69YN4 1812 aaKnown RBP27.69■■■□□ 2.02
C4orf48-201ENST00000409248 PIGBQ92521 554 aa27.68■■■□□ 2.02
C4orf48-201ENST00000409248 RSPH6AQ9H0K4 717 aa27.68■■■□□ 2.02
C4orf48-201ENST00000409248 PRKAR2BP31323 418 aa27.67■■■□□ 2.02
C4orf48-201ENST00000409248 GAS2L2Q8NHY3 880 aa27.67■■■□□ 2.02
C4orf48-201ENST00000409248 MTHFSDQ2M296 383 aaKnown RBP27.66■■■□□ 2.02
C4orf48-201ENST00000409248 ANO8Q9HCE9 1232 aaPredicted RBP27.66■■■□□ 2.02
C4orf48-201ENST00000409248 STK32BQ9NY57 414 aa27.66■■■□□ 2.02
C4orf48-201ENST00000409248 ADAMTS7Q9UKP4 1686 aa27.65■■■□□ 2.02
C4orf48-201ENST00000409248 FCHSD2O94868 740 aa27.65■■■□□ 2.02
C4orf48-201ENST00000409248 CCNL1Q9UK58 526 aaPredicted RBP27.65■■■□□ 2.02
C4orf48-201ENST00000409248 HMGB2P26583 209 aaKnown RBP27.64■■■□□ 2.02
C4orf48-201ENST00000409248 C5P01031 1676 aa27.64■■■□□ 2.02
C4orf48-201ENST00000409248 MRC1P22897 1456 aa27.64■■■□□ 2.01
C4orf48-201ENST00000409248 CABP4P57796 275 aa27.63■■■□□ 2.01
C4orf48-201ENST00000409248 LRRC4BQ9NT99 713 aa27.63■■■□□ 2.01
C4orf48-201ENST00000409248 MAP3K5Q99683 1374 aa27.62■■■□□ 2.01
C4orf48-201ENST00000409248 LRP5O75197 1615 aa27.6■■■□□ 2.01
C4orf48-201ENST00000409248 NEFMP07197 916 aa27.6■■■□□ 2.01
C4orf48-201ENST00000409248 SLC15A2Q16348 729 aa27.6■■■□□ 2.01
C4orf48-201ENST00000409248 TAF1LQ8IZX4 1826 aa27.6■■■□□ 2.01
C4orf48-201ENST00000409248 QSER1Q2KHR3 1735 aa27.59■■■□□ 2.01
C4orf48-201ENST00000409248 MRS2Q9HD23 443 aa27.59■■■□□ 2.01
C4orf48-201ENST00000409248 CASZ1Q86V15 1759 aa27.58■■■□□ 2.01
C4orf48-201ENST00000409248 GNAT3A8MTJ3 354 aa27.57■■■□□ 2
C4orf48-201ENST00000409248 RNMTO43148 476 aaKnown RBP27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms