RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 PARD3Q8TEW0 1356 aa13.38□□□□□ -0.27
NIF3L1-202ENST00000409020 EIF4G2P78344 907 aaKnown RBP eCLIP13.37□□□□□ -0.27
NIF3L1-202ENST00000409020 USHBP1Q8N6Y0 703 aa13.37□□□□□ -0.27
NIF3L1-202ENST00000409020 ACSBG1Q96GR2 724 aa13.37□□□□□ -0.27
NIF3L1-202ENST00000409020 RGPD2P0DJD1 1756 aa13.37□□□□□ -0.27
NIF3L1-202ENST00000409020 HSP90AB2PQ58FF8 381 aa13.37□□□□□ -0.27
NIF3L1-202ENST00000409020 PROM2Q8N271 834 aa13.37□□□□□ -0.27
NIF3L1-202ENST00000409020 MEGF6O75095 1541 aa13.36□□□□□ -0.27
NIF3L1-202ENST00000409020 NBPF6Q5VWK0 638 aa13.36□□□□□ -0.27
NIF3L1-202ENST00000409020 NBPF4Q96M43 638 aa13.36□□□□□ -0.27
NIF3L1-202ENST00000409020 EMILIN1Q9Y6C2 1016 aa13.36□□□□□ -0.27
NIF3L1-202ENST00000409020 RTL1A6NKG5 1358 aa13.35□□□□□ -0.27
NIF3L1-202ENST00000409020 ANO8Q9HCE9 1232 aaPredicted RBP13.35□□□□□ -0.27
NIF3L1-202ENST00000409020 LRP5O75197 1615 aa13.34□□□□□ -0.27
NIF3L1-202ENST00000409020 PLSCR1O15162 318 aa13.34□□□□□ -0.27
NIF3L1-202ENST00000409020 DDX54Q8TDD1 881 aaKnown RBP13.34□□□□□ -0.27
NIF3L1-202ENST00000409020 NHSQ6T4R5 1651 aa13.33□□□□□ -0.28
NIF3L1-202ENST00000409020 ATXN8OSP0DMR3 200 aa13.33□□□□□ -0.28
NIF3L1-202ENST00000409020 RGPD3A6NKT7 1758 aaPredicted RBP13.32□□□□□ -0.28
NIF3L1-202ENST00000409020 RGPD4Q7Z3J3 1758 aa13.32□□□□□ -0.28
NIF3L1-202ENST00000409020 SHANK3Q9BYB0 1731 aa13.32□□□□□ -0.28
NIF3L1-202ENST00000409020 PDGFDQ9GZP0 370 aaPredicted RBP13.32□□□□□ -0.28
NIF3L1-202ENST00000409020 INSRP06213 1382 aa13.32□□□□□ -0.28
NIF3L1-202ENST00000409020 FLT4P35916 1363 aa13.32□□□□□ -0.28
NIF3L1-202ENST00000409020 TNNT2P45379 298 aaPredicted RBP13.31□□□□□ -0.28
NIF3L1-202ENST00000409020 PANK3Q9H999 370 aa13.31□□□□□ -0.28
NIF3L1-202ENST00000409020 CGNL1Q0VF96 1302 aa13.31□□□□□ -0.28
NIF3L1-202ENST00000409020 PPM1GO15355 546 aaPredicted RBP13.31□□□□□ -0.28
NIF3L1-202ENST00000409020 TXNRD1Q16881 649 aa13.31□□□□□ -0.28
NIF3L1-202ENST00000409020 NBPF14Q5TI25 921 aa13.3□□□□□ -0.28
NIF3L1-202ENST00000409020 SMG6Q86US8 1419 aaKnown RBP13.29□□□□□ -0.28
NIF3L1-202ENST00000409020 BTAF1O14981 1849 aa13.28□□□□□ -0.28
NIF3L1-202ENST00000409020 ANKRD26Q9UPS8 1709 aa13.28□□□□□ -0.28
NIF3L1-202ENST00000409020 ZCRB1Q8TBF4 217 aaKnown RBP13.28□□□□□ -0.28
NIF3L1-202ENST00000409020 POLKQ9UBT6 870 aa13.28□□□□□ -0.28
NIF3L1-202ENST00000409020 NSD2O96028 1365 aa13.28□□□□□ -0.28
NIF3L1-202ENST00000409020 DOT1LQ8TEK3 1739 aa13.27□□□□□ -0.28
NIF3L1-202ENST00000409020 KIF24Q5T7B8 1368 aa13.27□□□□□ -0.29
NIF3L1-202ENST00000409020 LRRC4BQ9NT99 713 aa13.27□□□□□ -0.29
NIF3L1-202ENST00000409020 KIF7Q2M1P5 1343 aa13.27□□□□□ -0.29
NIF3L1-202ENST00000409020 PRIM1P49642 420 aaKnown RBP13.26□□□□□ -0.29
NIF3L1-202ENST00000409020 KCNQ4P56696 695 aa13.26□□□□□ -0.29
NIF3L1-202ENST00000409020 SYTL4Q96C24 671 aaPredicted RBP13.26□□□□□ -0.29
NIF3L1-202ENST00000409020 ATF5Q9Y2D1 282 aaPredicted RBP13.26□□□□□ -0.29
NIF3L1-202ENST00000409020 WASHC2AQ641Q2 1341 aa13.26□□□□□ -0.29
NIF3L1-202ENST00000409020 RAPGEF4Q8WZA2 1011 aa13.25□□□□□ -0.29
NIF3L1-202ENST00000409020 CASZ1Q86V15 1759 aa13.25□□□□□ -0.29
NIF3L1-202ENST00000409020 PAPPAQ13219 1627 aa13.25□□□□□ -0.29
NIF3L1-202ENST00000409020 NCAPD2Q15021 1401 aa13.25□□□□□ -0.29
NIF3L1-202ENST00000409020 ZNF827Q17R98 1081 aa13.24□□□□□ -0.29
NIF3L1-202ENST00000409020 EYA1Q99502 592 aa13.24□□□□□ -0.29
NIF3L1-202ENST00000409020 MAP2P11137 1827 aaKnown RBP13.24□□□□□ -0.29
NIF3L1-202ENST00000409020 CYP27B1O15528 508 aa13.24□□□□□ -0.29
NIF3L1-202ENST00000409020 ZBTB7AO95365 584 aa13.24□□□□□ -0.29
NIF3L1-202ENST00000409020 TATP17735 454 aaPredicted RBP13.24□□□□□ -0.29
NIF3L1-202ENST00000409020 SLC15A2Q16348 729 aa13.24□□□□□ -0.29
NIF3L1-202ENST00000409020 KAT6BQ8WYB5 2073 aa13.23□□□□□ -0.29
NIF3L1-202ENST00000409020 EIF4A2Q14240 407 aaKnown RBP13.23□□□□□ -0.29
NIF3L1-202ENST00000409020 STK32BQ9NY57 414 aa13.22□□□□□ -0.29
NIF3L1-202ENST00000409020 TOGARAM1Q9Y4F4 1720 aa13.22□□□□□ -0.29
NIF3L1-202ENST00000409020 AMER1Q5JTC6 1135 aaPredicted RBP13.21□□□□□ -0.3
NIF3L1-202ENST00000409020 PCDH11XQ9BZA7 1347 aa13.21□□□□□ -0.3
NIF3L1-202ENST00000409020 PCDH11YQ9BZA8 1340 aa13.21□□□□□ -0.3
NIF3L1-202ENST00000409020 PKD1L3Q7Z443 1732 aa13.2□□□□□ -0.3
NIF3L1-202ENST00000409020 MORC1Q86VD1 984 aa13.2□□□□□ -0.3
NIF3L1-202ENST00000409020 SPON1Q9HCB6 807 aa13.2□□□□□ -0.3
NIF3L1-202ENST00000409020 PTGER2P43116 358 aa13.19□□□□□ -0.3
NIF3L1-202ENST00000409020 AKT1S1Q96B36 256 aa13.19□□□□□ -0.3
NIF3L1-202ENST00000409020 KNSTRNQ9Y448 316 aa13.19□□□□□ -0.3
NIF3L1-202ENST00000409020 U3KPZ7 1027 aaPredicted RBP13.19□□□□□ -0.3
NIF3L1-202ENST00000409020 LY75O60449 1722 aa13.18□□□□□ -0.3
NIF3L1-202ENST00000409020 PER1O15534 1290 aaPredicted RBP13.18□□□□□ -0.3
NIF3L1-202ENST00000409020 MPRIPQ6WCQ1 1025 aa13.18□□□□□ -0.3
NIF3L1-202ENST00000409020 AEBP1Q8IUX7 1158 aa13.18□□□□□ -0.3
NIF3L1-202ENST00000409020 IGSF1Q8N6C5 1336 aa13.17□□□□□ -0.3
NIF3L1-202ENST00000409020 CNGB1Q14028 1251 aaPredicted RBP13.17□□□□□ -0.3
NIF3L1-202ENST00000409020 SLC27A3Q5K4L6 730 aa13.16□□□□□ -0.3
NIF3L1-202ENST00000409020 PPP1R1BQ9UD71 204 aaPredicted RBP13.16□□□□□ -0.3
NIF3L1-202ENST00000409020 CCNL1Q9UK58 526 aaPredicted RBP13.16□□□□□ -0.3
NIF3L1-202ENST00000409020 PNPLA7Q6ZV29 1317 aa13.16□□□□□ -0.3
NIF3L1-202ENST00000409020 CC2D1BQ5T0F9 858 aaKnown RBP13.15□□□□□ -0.3
NIF3L1-202ENST00000409020 TUBGCP6Q96RT7 1819 aa13.15□□□□□ -0.3
NIF3L1-202ENST00000409020 PHKG2P15735 406 aa13.15□□□□□ -0.31
NIF3L1-202ENST00000409020 NKX1-1Q15270 411 aaPredicted RBP13.15□□□□□ -0.31
NIF3L1-202ENST00000409020 PIGBQ92521 554 aa13.15□□□□□ -0.31
NIF3L1-202ENST00000409020 SGIP1Q9BQI5 828 aa13.15□□□□□ -0.31
NIF3L1-202ENST00000409020 SPG7Q9UQ90 795 aa13.15□□□□□ -0.31
NIF3L1-202ENST00000409020 PALLDQ8WX93 1383 aa13.14□□□□□ -0.31
NIF3L1-202ENST00000409020 ITGB4P16144 1822 aa13.14□□□□□ -0.31
NIF3L1-202ENST00000409020 IL13P35225 146 aa13.13□□□□□ -0.31
NIF3L1-202ENST00000409020 MTFR1LQ9H019 292 aa13.13□□□□□ -0.31
NIF3L1-202ENST00000409020 FKBP8Q14318 412 aa13.12□□□□□ -0.31
NIF3L1-202ENST00000409020 SMIM5Q71RC9 77 aa13.12□□□□□ -0.31
NIF3L1-202ENST00000409020 AMIGO3Q86WK7 504 aa13.12□□□□□ -0.31
NIF3L1-202ENST00000409020 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.12□□□□□ -0.31
NIF3L1-202ENST00000409020 TFCP2L1Q9NZI6 479 aa13.12□□□□□ -0.31
NIF3L1-202ENST00000409020 IFNL2Q8IZJ0 200 aa13.12□□□□□ -0.31
NIF3L1-202ENST00000409020 MTHFSP49914 203 aa13.11□□□□□ -0.31
NIF3L1-202ENST00000409020 SULT6B1Q6IMI4 303 aa13.11□□□□□ -0.31
NIF3L1-202ENST00000409020 ASAP1Q9ULH1 1129 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms