RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 INTS3Q68E01 1043 aaKnown RBP21.11■□□□□ 0.97
NUP50-203ENST00000407019 ANTXR1Q9H6X2 564 aa21.09■□□□□ 0.97
NUP50-203ENST00000407019 KDRP35968 1356 aa21.09■□□□□ 0.97
NUP50-203ENST00000407019 RGS12O14924 1447 aa21.09■□□□□ 0.97
NUP50-203ENST00000407019 AMPHP49418 695 aa21.09■□□□□ 0.97
NUP50-203ENST00000407019 PTPRCP08575 1304 aa21.08■□□□□ 0.96
NUP50-203ENST00000407019 MTHFSDQ2M296 383 aaKnown RBP21.08■□□□□ 0.96
NUP50-203ENST00000407019 IGSF1Q8N6C5 1336 aa21.07■□□□□ 0.96
NUP50-203ENST00000407019 RTF1Q92541 710 aaKnown RBP21.07■□□□□ 0.96
NUP50-203ENST00000407019 KCNA6P17658 529 aa21.06■□□□□ 0.96
NUP50-203ENST00000407019 EYA1Q99502 592 aa21.06■□□□□ 0.96
NUP50-203ENST00000407019 CEP170BQ9Y4F5 1589 aaPredicted RBP21.06■□□□□ 0.96
NUP50-203ENST00000407019 FOXO3O43524 673 aa21.05■□□□□ 0.96
NUP50-203ENST00000407019 GAS2L2Q8NHY3 880 aa21.05■□□□□ 0.96
NUP50-203ENST00000407019 RBM25P49756 843 aaKnown RBP21.05■□□□□ 0.96
NUP50-203ENST00000407019 NLRP6P59044 892 aa21.05■□□□□ 0.96
NUP50-203ENST00000407019 TSPYL4Q9UJ04 414 aa21.03■□□□□ 0.96
NUP50-203ENST00000407019 ATP10DQ9P241 1426 aa21.03■□□□□ 0.96
NUP50-203ENST00000407019 MSH6P52701 1360 aa21.02■□□□□ 0.96
NUP50-203ENST00000407019 USP54Q70EL1 1684 aa21.02■□□□□ 0.96
NUP50-203ENST00000407019 ANKRD44Q8N8A2 993 aa21.02■□□□□ 0.96
NUP50-203ENST00000407019 DCTPP1Q9H773 170 aa21.02■□□□□ 0.96
NUP50-203ENST00000407019 HSCBQ8IWL3 235 aa21.01■□□□□ 0.95
NUP50-203ENST00000407019 RPAP2Q8IXW5 612 aaPredicted RBP21.01■□□□□ 0.95
NUP50-203ENST00000407019 MIS18AQ9NYP9 233 aa21.01■□□□□ 0.95
NUP50-203ENST00000407019 MARF1Q9Y4F3 1742 aaKnown RBP21.01■□□□□ 0.95
NUP50-203ENST00000407019 SLC4A2P04920 1241 aa21■□□□□ 0.95
NUP50-203ENST00000407019 HTATSF1O43719 755 aaKnown RBP21■□□□□ 0.95
NUP50-203ENST00000407019 HOXC9P31274 260 aa21■□□□□ 0.95
NUP50-203ENST00000407019 LRRC37A3O60309 1634 aa20.99■□□□□ 0.95
NUP50-203ENST00000407019 RTL1A6NKG5 1358 aa20.99■□□□□ 0.95
NUP50-203ENST00000407019 CEP85Q6P2H3 762 aa20.98■□□□□ 0.95
NUP50-203ENST00000407019 NUTM2GQ5VZR2 741 aa20.98■□□□□ 0.95
NUP50-203ENST00000407019 TBC1D9Q6ZT07 1266 aa20.98■□□□□ 0.95
NUP50-203ENST00000407019 SPRYD3Q8NCJ5 442 aa20.97■□□□□ 0.95
NUP50-203ENST00000407019 NWD1Q149M9 1564 aa20.97■□□□□ 0.95
NUP50-203ENST00000407019 CDC45O75419 566 aa20.97■□□□□ 0.95
NUP50-203ENST00000407019 ABTB2Q8N961 1025 aa20.97■□□□□ 0.95
NUP50-203ENST00000407019 PLEKHM2Q8IWE5 1019 aa20.96■□□□□ 0.95
NUP50-203ENST00000407019 SNX21Q969T3 373 aa20.96■□□□□ 0.95
NUP50-203ENST00000407019 MEIS3Q99687 375 aa20.96■□□□□ 0.95
NUP50-203ENST00000407019 GNAT3A8MTJ3 354 aa20.95■□□□□ 0.94
NUP50-203ENST00000407019 CHMP5Q9NZZ3 219 aa20.95■□□□□ 0.94
NUP50-203ENST00000407019 GSPT1P15170 499 aaKnown RBP20.94■□□□□ 0.94
NUP50-203ENST00000407019 EIF5BO60841 1220 aaKnown RBP20.93■□□□□ 0.94
NUP50-203ENST00000407019 CCT4P50991 539 aaKnown RBP20.93■□□□□ 0.94
NUP50-203ENST00000407019 TTC22Q5TAA0 569 aa20.93■□□□□ 0.94
NUP50-203ENST00000407019 G2E3Q7L622 706 aa20.93■□□□□ 0.94
NUP50-203ENST00000407019 STK31Q9BXU1 1019 aa20.93■□□□□ 0.94
NUP50-203ENST00000407019 PHF8Q9UPP1 1060 aa20.93■□□□□ 0.94
NUP50-203ENST00000407019 MAP3K5Q99683 1374 aa20.93■□□□□ 0.94
NUP50-203ENST00000407019 NCOA3Q9Y6Q9 1424 aa20.92■□□□□ 0.94
NUP50-203ENST00000407019 CHD2O14647 1828 aaKnown RBP20.91■□□□□ 0.94
NUP50-203ENST00000407019 SLC4A10Q6U841 1118 aa20.91■□□□□ 0.94
NUP50-203ENST00000407019 C14orf37Q86TY3 774 aa20.91■□□□□ 0.94
NUP50-203ENST00000407019 ANKLE2Q86XL3 938 aa20.91■□□□□ 0.94
NUP50-203ENST00000407019 HMMRO75330 724 aa20.9■□□□□ 0.94
NUP50-203ENST00000407019 LTV1Q96GA3 475 aaPredicted RBP20.9■□□□□ 0.94
NUP50-203ENST00000407019 KIF2CQ99661 725 aa20.9■□□□□ 0.94
NUP50-203ENST00000407019 FAM208AQ9UK61 1670 aaKnown RBP20.9■□□□□ 0.94
NUP50-203ENST00000407019 F6X3S4 739 aa20.9■□□□□ 0.94
NUP50-203ENST00000407019 SOS1Q07889 1333 aaPredicted RBP20.9■□□□□ 0.94
NUP50-203ENST00000407019 CCDC30Q5VVM6 783 aa20.89■□□□□ 0.93
NUP50-203ENST00000407019 C16orf71Q8IYS4 520 aaPredicted RBP20.89■□□□□ 0.93
NUP50-203ENST00000407019 BABAM1Q9NWV8 329 aa20.89■□□□□ 0.93
NUP50-203ENST00000407019 TRHP20396 242 aaPredicted RBP20.89■□□□□ 0.93
NUP50-203ENST00000407019 ZNF142P52746 1687 aaPredicted RBP20.88■□□□□ 0.93
NUP50-203ENST00000407019 IL17REQ8NFR9 667 aa20.87■□□□□ 0.93
NUP50-203ENST00000407019 LTN1O94822 1766 aa20.87■□□□□ 0.93
NUP50-203ENST00000407019 HSP90AB1P08238 724 aaKnown RBP20.87■□□□□ 0.93
NUP50-203ENST00000407019 FLIIQ13045 1269 aa20.87■□□□□ 0.93
NUP50-203ENST00000407019 SMARCA5O60264 1052 aaPredicted RBP20.86■□□□□ 0.93
NUP50-203ENST00000407019 MCM4P33991 863 aa20.86■□□□□ 0.93
NUP50-203ENST00000407019 TAF7Q15545 349 aaPredicted RBP20.86■□□□□ 0.93
NUP50-203ENST00000407019 OTUD7AQ8TE49 926 aaPredicted RBP20.86■□□□□ 0.93
NUP50-203ENST00000407019 NFAT5O94916 1531 aa20.86■□□□□ 0.93
NUP50-203ENST00000407019 ADGRL3Q9HAR2 1447 aa20.85■□□□□ 0.93
NUP50-203ENST00000407019 APBB1O00213 710 aa20.85■□□□□ 0.93
NUP50-203ENST00000407019 GNAI2P04899 355 aa20.85■□□□□ 0.93
NUP50-203ENST00000407019 DDIT3P35638 169 aa20.85■□□□□ 0.93
NUP50-203ENST00000407019 FKBP5Q13451 457 aaPredicted RBP20.85■□□□□ 0.93
NUP50-203ENST00000407019 IP6K1Q92551 441 aa20.85■□□□□ 0.93
NUP50-203ENST00000407019 USHBP1Q8N6Y0 703 aa20.84■□□□□ 0.93
NUP50-203ENST00000407019 CIZ1Q9ULV3 898 aaPredicted RBP20.82■□□□□ 0.92
NUP50-203ENST00000407019 GNAI3P08754 354 aa20.82■□□□□ 0.92
NUP50-203ENST00000407019 SDSP20132 328 aa20.82■□□□□ 0.92
NUP50-203ENST00000407019 CASC1Q6TDU7 716 aa20.82■□□□□ 0.92
NUP50-203ENST00000407019 NECTIN2Q92692 538 aa20.82■□□□□ 0.92
NUP50-203ENST00000407019 RBM33Q96EV2 1170 aaKnown RBP20.82■□□□□ 0.92
NUP50-203ENST00000407019 PXDNLA1KZ92 1463 aa20.82■□□□□ 0.92
NUP50-203ENST00000407019 K7ELQ4 463 aaPredicted RBP20.81■□□□□ 0.92
NUP50-203ENST00000407019 ESCO1Q5FWF5 840 aa20.81■□□□□ 0.92
NUP50-203ENST00000407019 IL27Q8NEV9 243 aa20.81■□□□□ 0.92
NUP50-203ENST00000407019 PSME1Q06323 249 aa20.81■□□□□ 0.92
NUP50-203ENST00000407019 KCNH5Q8NCM2 988 aa20.81■□□□□ 0.92
NUP50-203ENST00000407019 CD2BP2O95400 341 aaKnown RBP20.8■□□□□ 0.92
NUP50-203ENST00000407019 N4BP2Q86UW6 1770 aaPredicted RBP20.8■□□□□ 0.92
NUP50-203ENST00000407019 CEMIPQ8WUJ3 1361 aa20.8■□□□□ 0.92
NUP50-203ENST00000407019 RBM42Q9BTD8 480 aaKnown RBP20.79■□□□□ 0.92
NUP50-203ENST00000407019 BRPF3Q9ULD4 1205 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms