RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 GBP4Q96PP9 640 aa20.21■□□□□ 0.83
LSP1-204ENST00000406638 CALD1Q05682 793 aaKnown RBP20.21■□□□□ 0.83
LSP1-204ENST00000406638 AAMPQ13685 434 aa20.21■□□□□ 0.83
LSP1-204ENST00000406638 CDK12Q9NYV4 1490 aaPredicted RBP20.2■□□□□ 0.82
LSP1-204ENST00000406638 NASPP49321 788 aaPredicted RBP20.2■□□□□ 0.82
LSP1-204ENST00000406638 PRDM4Q9UKN5 801 aa20.2■□□□□ 0.82
LSP1-204ENST00000406638 OFD1O75665 1012 aa20.2■□□□□ 0.82
LSP1-204ENST00000406638 HSP90AB1P08238 724 aaKnown RBP20.2■□□□□ 0.82
LSP1-204ENST00000406638 PIK3C2AO00443 1686 aa20.19■□□□□ 0.82
LSP1-204ENST00000406638 PEAK1Q9H792 1746 aa20.19■□□□□ 0.82
LSP1-204ENST00000406638 CCDC173Q0VFZ6 552 aa20.19■□□□□ 0.82
LSP1-204ENST00000406638 TTC21AQ8NDW8 1320 aa20.19■□□□□ 0.82
LSP1-204ENST00000406638 USP31Q70CQ4 1352 aa20.18■□□□□ 0.82
LSP1-204ENST00000406638 FCHSD2O94868 740 aa20.18■□□□□ 0.82
LSP1-204ENST00000406638 MSNP26038 577 aaKnown RBP20.18■□□□□ 0.82
LSP1-204ENST00000406638 NGEFQ8N5V2 710 aa20.18■□□□□ 0.82
LSP1-204ENST00000406638 ARID3AQ99856 593 aa20.18■□□□□ 0.82
LSP1-204ENST00000406638 SKOR2Q2VWA4 1001 aaPredicted RBP20.18■□□□□ 0.82
LSP1-204ENST00000406638 TMEM94Q12767 1356 aa20.17■□□□□ 0.82
LSP1-204ENST00000406638 PSME1Q06323 249 aa20.17■□□□□ 0.82
LSP1-204ENST00000406638 R3HCC1Q9Y3T6 440 aaKnown RBP20.17■□□□□ 0.82
LSP1-204ENST00000406638 RAB3GAP1Q15042 981 aa20.17■□□□□ 0.82
LSP1-204ENST00000406638 SULT6B1Q6IMI4 303 aa20.17■□□□□ 0.82
LSP1-204ENST00000406638 STRCP1A6NGW2 1772 aa20.16■□□□□ 0.82
LSP1-204ENST00000406638 ZBTB7CA1YPR0 619 aa20.16■□□□□ 0.82
LSP1-204ENST00000406638 MVPQ14764 893 aaKnown RBP20.16■□□□□ 0.82
LSP1-204ENST00000406638 PPP1R9BQ96SB3 815 aa20.16■□□□□ 0.82
LSP1-204ENST00000406638 FAM83GA6ND36 823 aa20.16■□□□□ 0.82
LSP1-204ENST00000406638 LMOD2Q6P5Q4 547 aa20.16■□□□□ 0.82
LSP1-204ENST00000406638 ANP32BQ92688 251 aaKnown RBP20.16■□□□□ 0.82
LSP1-204ENST00000406638 NCOA3Q9Y6Q9 1424 aa20.16■□□□□ 0.82
LSP1-204ENST00000406638 SMC5Q8IY18 1101 aa20.15■□□□□ 0.82
LSP1-204ENST00000406638 DCTN1Q14203 1278 aa20.15■□□□□ 0.82
LSP1-204ENST00000406638 CCDC27Q2M243 656 aa20.15■□□□□ 0.82
LSP1-204ENST00000406638 FTSJ3Q8IY81 847 aaKnown RBP20.15■□□□□ 0.82
LSP1-204ENST00000406638 LTV1Q96GA3 475 aaPredicted RBP20.15■□□□□ 0.82
LSP1-204ENST00000406638 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.14■□□□□ 0.82
LSP1-204ENST00000406638 WDR63Q8IWG1 891 aa20.14■□□□□ 0.82
LSP1-204ENST00000406638 AMPHP49418 695 aa20.14■□□□□ 0.81
LSP1-204ENST00000406638 LMTK3Q96Q04 1460 aa20.14■□□□□ 0.81
LSP1-204ENST00000406638 NWD1Q149M9 1564 aa20.13■□□□□ 0.81
LSP1-204ENST00000406638 CD2BP2O95400 341 aaKnown RBP20.12■□□□□ 0.81
LSP1-204ENST00000406638 SNX21Q969T3 373 aa20.12■□□□□ 0.81
LSP1-204ENST00000406638 CIZ1Q9ULV3 898 aaPredicted RBP20.12■□□□□ 0.81
LSP1-204ENST00000406638 C19orf44Q9H6X5 657 aa20.12■□□□□ 0.81
LSP1-204ENST00000406638 SSFA2P28290 1259 aa20.11■□□□□ 0.81
LSP1-204ENST00000406638 RBM25P49756 843 aaKnown RBP20.11■□□□□ 0.81
LSP1-204ENST00000406638 DZIP1LQ8IYY4 767 aaKnown RBP20.11■□□□□ 0.81
LSP1-204ENST00000406638 DDX49Q9Y6V7 483 aaKnown RBP20.11■□□□□ 0.81
LSP1-204ENST00000406638 EXOSC9Q06265 439 aaKnown RBP20.1■□□□□ 0.81
LSP1-204ENST00000406638 NFE2L2Q16236 605 aa20.1■□□□□ 0.81
LSP1-204ENST00000406638 ZKSCAN2Q63HK3 967 aa20.1■□□□□ 0.81
LSP1-204ENST00000406638 ZNF335Q9H4Z2 1342 aaPredicted RBP20.1■□□□□ 0.81
LSP1-204ENST00000406638 MARF1Q9Y4F3 1742 aaKnown RBP20.1■□□□□ 0.81
LSP1-204ENST00000406638 USHBP1Q8N6Y0 703 aa20.08■□□□□ 0.81
LSP1-204ENST00000406638 C1orf167Q5SNV9 1468 aa20.08■□□□□ 0.81
LSP1-204ENST00000406638 EYA1Q99502 592 aa20.08■□□□□ 0.8
LSP1-204ENST00000406638 HOXC9P31274 260 aa20.07■□□□□ 0.8
LSP1-204ENST00000406638 ITPRIPQ8IWB1 547 aa20.07■□□□□ 0.8
LSP1-204ENST00000406638 RBM42Q9BTD8 480 aaKnown RBP20.07■□□□□ 0.8
LSP1-204ENST00000406638 A0A0U1RQG5 324 aaPredicted RBP20.07■□□□□ 0.8
LSP1-204ENST00000406638 SBNO1A3KN83 1393 aa20.06■□□□□ 0.8
LSP1-204ENST00000406638 NCLP19338 710 aaKnown RBP20.06■□□□□ 0.8
LSP1-204ENST00000406638 FLT4P35916 1363 aa20.06■□□□□ 0.8
LSP1-204ENST00000406638 UQCRHLA0A096LP55 91 aa20.06■□□□□ 0.8
LSP1-204ENST00000406638 UQCRHP07919 91 aa20.06■□□□□ 0.8
LSP1-204ENST00000406638 ATF3P18847 181 aa20.06■□□□□ 0.8
LSP1-204ENST00000406638 KRT28Q7Z3Y7 464 aa20.06■□□□□ 0.8
LSP1-204ENST00000406638 KIF2CQ99661 725 aa20.06■□□□□ 0.8
LSP1-204ENST00000406638 LNPKQ9C0E8 428 aa20.06■□□□□ 0.8
LSP1-204ENST00000406638 GOLGA6L22H0YM25 854 aa20.06■□□□□ 0.8
LSP1-204ENST00000406638 PTMSP20962 102 aa20.06■□□□□ 0.8
LSP1-204ENST00000406638 HDAC1Q13547 482 aaPredicted RBP20.06■□□□□ 0.8
LSP1-204ENST00000406638 TERF1P54274 439 aa20.05■□□□□ 0.8
LSP1-204ENST00000406638 KLHL40Q2TBA0 621 aa20.04■□□□□ 0.8
LSP1-204ENST00000406638 GAS2L2Q8NHY3 880 aa20.04■□□□□ 0.8
LSP1-204ENST00000406638 MAP7D2Q96T17 732 aa20.04■□□□□ 0.8
LSP1-204ENST00000406638 STRCQ7RTU9 1775 aa20.04■□□□□ 0.8
LSP1-204ENST00000406638 ELL2O00472 640 aaPredicted RBP20.04■□□□□ 0.8
LSP1-204ENST00000406638 MCM10Q7L590 875 aa20.04■□□□□ 0.8
LSP1-204ENST00000406638 TRIM27P14373 513 aa20.03■□□□□ 0.8
LSP1-204ENST00000406638 PRDM10Q9NQV6 1147 aa20.03■□□□□ 0.8
LSP1-204ENST00000406638 SMC4Q9NTJ3 1288 aa20.03■□□□□ 0.8
LSP1-204ENST00000406638 MST1RQ04912 1400 aa20.03■□□□□ 0.8
LSP1-204ENST00000406638 K7ELQ4 463 aaPredicted RBP20.03■□□□□ 0.8
LSP1-204ENST00000406638 BAG4O95429 457 aaKnown RBP20.03■□□□□ 0.8
LSP1-204ENST00000406638 CAVIN1Q6NZI2 390 aaKnown RBP20.03■□□□□ 0.8
LSP1-204ENST00000406638 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.03■□□□□ 0.8
LSP1-204ENST00000406638 NOL7Q9UMY1 257 aaKnown RBP20.02■□□□□ 0.79
LSP1-204ENST00000406638 TSPYL6Q8N831 410 aa20.01■□□□□ 0.79
LSP1-204ENST00000406638 CABLES1Q8TDN4 633 aa20.01■□□□□ 0.79
LSP1-204ENST00000406638 MCTP1Q6DN14 999 aa20.01■□□□□ 0.79
LSP1-204ENST00000406638 RBSNQ9H1K0 784 aa20.01■□□□□ 0.79
LSP1-204ENST00000406638 MTHFSDQ2M296 383 aaKnown RBP20■□□□□ 0.79
LSP1-204ENST00000406638 LRRC59Q96AG4 307 aaKnown RBP20■□□□□ 0.79
LSP1-204ENST00000406638 GCP02774 474 aa20■□□□□ 0.79
LSP1-204ENST00000406638 DDX19BQ9UMR2 479 aa19.99■□□□□ 0.79
LSP1-204ENST00000406638 ZNF500O60304 480 aaPredicted RBP19.99■□□□□ 0.79
LSP1-204ENST00000406638 KRT24Q2M2I5 525 aa19.99■□□□□ 0.79
LSP1-204ENST00000406638 NCBP3Q53F19 620 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms