RNA–Protein interactions for RNA: ENST00000404025.2

NLRC4-204, Transcript of NLR family CARD domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NLRC4, Length 3,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-204ENST00000404025 ABTB2Q8N961 1025 aa9.4□□□□□ -0.9
NLRC4-204ENST00000404025 RBM33Q96EV2 1170 aaKnown RBP9.4□□□□□ -0.9
NLRC4-204ENST00000404025 EYA1Q99502 592 aa9.4□□□□□ -0.9
NLRC4-204ENST00000404025 TBX22Q9Y458 520 aa9.4□□□□□ -0.9
NLRC4-204ENST00000404025 CDC45O75419 566 aa9.4□□□□□ -0.9
NLRC4-204ENST00000404025 INTS3Q68E01 1043 aaKnown RBP9.4□□□□□ -0.9
NLRC4-204ENST00000404025 STK31Q9BXU1 1019 aa9.4□□□□□ -0.9
NLRC4-204ENST00000404025 TTC21AQ8NDW8 1320 aa9.4□□□□□ -0.9
NLRC4-204ENST00000404025 TRHP20396 242 aaPredicted RBP9.4□□□□□ -0.91
NLRC4-204ENST00000404025 PTPRUQ92729 1446 aa9.4□□□□□ -0.91
NLRC4-204ENST00000404025 G2E3Q7L622 706 aa9.39□□□□□ -0.91
NLRC4-204ENST00000404025 GAS2L2Q8NHY3 880 aa9.39□□□□□ -0.91
NLRC4-204ENST00000404025 DCTPP1Q9H773 170 aa9.39□□□□□ -0.91
NLRC4-204ENST00000404025 OVOS2A0A0J9YW53 1432 aa9.39□□□□□ -0.91
NLRC4-204ENST00000404025 OVOS2Q6IE36 1432 aa9.39□□□□□ -0.91
NLRC4-204ENST00000404025 RBM25P49756 843 aaKnown RBP9.39□□□□□ -0.91
NLRC4-204ENST00000404025 RPAP2Q8IXW5 612 aaPredicted RBP9.39□□□□□ -0.91
NLRC4-204ENST00000404025 ANKRD44Q8N8A2 993 aa9.39□□□□□ -0.91
NLRC4-204ENST00000404025 KCNA6P17658 529 aa9.39□□□□□ -0.91
NLRC4-204ENST00000404025 MCM4P33991 863 aa9.39□□□□□ -0.91
NLRC4-204ENST00000404025 PLEKHM2Q8IWE5 1019 aa9.39□□□□□ -0.91
NLRC4-204ENST00000404025 OTUD7AQ8TE49 926 aaPredicted RBP9.39□□□□□ -0.91
NLRC4-204ENST00000404025 RBM42Q9BTD8 480 aaKnown RBP9.39□□□□□ -0.91
NLRC4-204ENST00000404025 FLT4P35916 1363 aa9.39□□□□□ -0.91
NLRC4-204ENST00000404025 CEP85Q6P2H3 762 aa9.38□□□□□ -0.91
NLRC4-204ENST00000404025 MSH6P52701 1360 aa9.38□□□□□ -0.91
NLRC4-204ENST00000404025 FKBP5Q13451 457 aaPredicted RBP9.38□□□□□ -0.91
NLRC4-204ENST00000404025 UBE2Q2Q8WVN8 375 aa9.38□□□□□ -0.91
NLRC4-204ENST00000404025 PTPRCP08575 1304 aa9.38□□□□□ -0.91
NLRC4-204ENST00000404025 ITSN1Q15811 1721 aa9.38□□□□□ -0.91
NLRC4-204ENST00000404025 HMMRO75330 724 aa9.38□□□□□ -0.91
NLRC4-204ENST00000404025 USHBP1Q8N6Y0 703 aa9.38□□□□□ -0.91
NLRC4-204ENST00000404025 GSPT1P15170 499 aaKnown RBP9.37□□□□□ -0.91
NLRC4-204ENST00000404025 SBNO1A3KN83 1393 aa9.37□□□□□ -0.91
NLRC4-204ENST00000404025 MON2Q7Z3U7 1717 aa9.37□□□□□ -0.91
NLRC4-204ENST00000404025 KIAA0232Q92628 1395 aa9.37□□□□□ -0.91
NLRC4-204ENST00000404025 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.37□□□□□ -0.91
NLRC4-204ENST00000404025 UBR1Q8IWV7 1749 aa9.37□□□□□ -0.91
NLRC4-204ENST00000404025 USP31Q70CQ4 1352 aa9.37□□□□□ -0.91
NLRC4-204ENST00000404025 CASC1Q6TDU7 716 aa9.37□□□□□ -0.91
NLRC4-204ENST00000404025 C3P01024 1663 aa9.36□□□□□ -0.91
NLRC4-204ENST00000404025 GNAT3A8MTJ3 354 aa9.36□□□□□ -0.91
NLRC4-204ENST00000404025 TTC22Q5TAA0 569 aa9.36□□□□□ -0.91
NLRC4-204ENST00000404025 LMOD2Q6P5Q4 547 aa9.36□□□□□ -0.91
NLRC4-204ENST00000404025 ARHGEF10O15013 1369 aa9.36□□□□□ -0.91
NLRC4-204ENST00000404025 DLG5Q8TDM6 1919 aa9.36□□□□□ -0.91
NLRC4-204ENST00000404025 KLHL34Q8N239 644 aa9.36□□□□□ -0.91
NLRC4-204ENST00000404025 TRAK2O60296 914 aa9.35□□□□□ -0.91
NLRC4-204ENST00000404025 HOXC9P31274 260 aa9.35□□□□□ -0.91
NLRC4-204ENST00000404025 CCT4P50991 539 aaKnown RBP9.35□□□□□ -0.91
NLRC4-204ENST00000404025 SNX21Q969T3 373 aa9.35□□□□□ -0.91
NLRC4-204ENST00000404025 EXOC6BQ9Y2D4 811 aa9.35□□□□□ -0.91
NLRC4-204ENST00000404025 KIF13AQ9H1H9 1805 aa9.35□□□□□ -0.91
NLRC4-204ENST00000404025 KNDC1Q76NI1 1749 aa9.35□□□□□ -0.91
NLRC4-204ENST00000404025 RTL1A6NKG5 1358 aa9.35□□□□□ -0.91
NLRC4-204ENST00000404025 KIF24Q5T7B8 1368 aa9.35□□□□□ -0.91
NLRC4-204ENST00000404025 CCDC30Q5VVM6 783 aa9.35□□□□□ -0.91
NLRC4-204ENST00000404025 CD2BP2O95400 341 aaKnown RBP9.35□□□□□ -0.91
NLRC4-204ENST00000404025 GNAI2P04899 355 aa9.35□□□□□ -0.91
NLRC4-204ENST00000404025 EIF2S2P20042 333 aaKnown RBP9.35□□□□□ -0.91
NLRC4-204ENST00000404025 CRB1P82279 1406 aa9.35□□□□□ -0.91
NLRC4-204ENST00000404025 AKAP12Q02952 1782 aa9.35□□□□□ -0.91
NLRC4-204ENST00000404025 IGSF1Q8N6C5 1336 aa9.34□□□□□ -0.91
NLRC4-204ENST00000404025 K7ELQ4 463 aaPredicted RBP9.34□□□□□ -0.91
NLRC4-204ENST00000404025 FLIIQ13045 1269 aa9.34□□□□□ -0.91
NLRC4-204ENST00000404025 AEBP2Q6ZN18 517 aaPredicted RBP9.34□□□□□ -0.91
NLRC4-204ENST00000404025 SDSP20132 328 aa9.34□□□□□ -0.91
NLRC4-204ENST00000404025 L1TD1Q5T7N2 865 aaKnown RBP9.34□□□□□ -0.91
NLRC4-204ENST00000404025 PSME1Q06323 249 aa9.34□□□□□ -0.91
NLRC4-204ENST00000404025 KIF2CQ99661 725 aa9.34□□□□□ -0.91
NLRC4-204ENST00000404025 PHF8Q9UPP1 1060 aa9.34□□□□□ -0.91
NLRC4-204ENST00000404025 GOLGA6L3A6NEY3 463 aa9.33□□□□□ -0.92
NLRC4-204ENST00000404025 ESCO1Q5FWF5 840 aa9.33□□□□□ -0.92
NLRC4-204ENST00000404025 TSHZ3Q63HK5 1081 aa9.33□□□□□ -0.92
NLRC4-204ENST00000404025 TNPO1Q92973 898 aaKnown RBP9.33□□□□□ -0.92
NLRC4-204ENST00000404025 DDX11L8A8MPP1 907 aa9.33□□□□□ -0.92
NLRC4-204ENST00000404025 TAF7Q15545 349 aaPredicted RBP9.33□□□□□ -0.92
NLRC4-204ENST00000404025 GBP4Q96PP9 640 aa9.33□□□□□ -0.92
NLRC4-204ENST00000404025 IL17REQ8NFR9 667 aa9.33□□□□□ -0.92
NLRC4-204ENST00000404025 RGS12O14924 1447 aa9.32□□□□□ -0.92
NLRC4-204ENST00000404025 SSH2Q76I76 1423 aa9.32□□□□□ -0.92
NLRC4-204ENST00000404025 HDGFL1Q5TGJ6 251 aa9.32□□□□□ -0.92
NLRC4-204ENST00000404025 PKNOX2Q96KN3 472 aa9.32□□□□□ -0.92
NLRC4-204ENST00000404025 TRIM6-TRIM34B2RNG4 842 aa9.32□□□□□ -0.92
NLRC4-204ENST00000404025 GNAI3P08754 354 aa9.32□□□□□ -0.92
NLRC4-204ENST00000404025 XPCQ01831 940 aaPredicted RBP9.32□□□□□ -0.92
NLRC4-204ENST00000404025 ATP10DQ9P241 1426 aa9.32□□□□□ -0.92
NLRC4-204ENST00000404025 PEAK1Q9H792 1746 aa9.32□□□□□ -0.92
NLRC4-204ENST00000404025 RILPL2Q969X0 211 aa9.32□□□□□ -0.92
NLRC4-204ENST00000404025 HTATSF1O43719 755 aaKnown RBP9.31□□□□□ -0.92
NLRC4-204ENST00000404025 RABEP1Q15276 862 aa9.31□□□□□ -0.92
NLRC4-204ENST00000404025 ANKLE2Q86XL3 938 aa9.31□□□□□ -0.92
NLRC4-204ENST00000404025 USP26Q9BXU7 913 aa9.31□□□□□ -0.92
NLRC4-204ENST00000404025 CIZ1Q9ULV3 898 aaPredicted RBP9.31□□□□□ -0.92
NLRC4-204ENST00000404025 LRRFIP2Q9Y608 721 aaKnown RBP9.31□□□□□ -0.92
NLRC4-204ENST00000404025 CEP170BQ9Y4F5 1589 aaPredicted RBP9.31□□□□□ -0.92
NLRC4-204ENST00000404025 KDRP35968 1356 aa9.31□□□□□ -0.92
NLRC4-204ENST00000404025 REC8O95072 547 aa9.3□□□□□ -0.92
NLRC4-204ENST00000404025 PDE1AP54750 535 aa9.3□□□□□ -0.92
NLRC4-204ENST00000404025 LRRCC1Q9C099 1032 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms