RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 ARHGAP45Q92619 1136 aa17.49■□□□□ 0.39
ATG3-202ENST00000402314 RBM33Q96EV2 1170 aaKnown RBP17.49■□□□□ 0.39
ATG3-202ENST00000402314 SSFA2P28290 1259 aa17.49■□□□□ 0.39
ATG3-202ENST00000402314 PTPRUQ92729 1446 aa17.49■□□□□ 0.39
ATG3-202ENST00000402314 TECPR2O15040 1411 aa17.48■□□□□ 0.39
ATG3-202ENST00000402314 PTCH1Q13635 1447 aa17.48■□□□□ 0.39
ATG3-202ENST00000402314 OTUD7AQ8TE49 926 aaPredicted RBP17.48■□□□□ 0.39
ATG3-202ENST00000402314 DLG5Q8TDM6 1919 aa17.48■□□□□ 0.39
ATG3-202ENST00000402314 MAP3K19Q56UN5 1328 aa17.48■□□□□ 0.39
ATG3-202ENST00000402314 NGDNQ8NEJ9 315 aaKnown RBP17.47■□□□□ 0.39
ATG3-202ENST00000402314 SIRT1Q96EB6 747 aa17.47■□□□□ 0.39
ATG3-202ENST00000402314 PLEKHG5O94827 1062 aa17.47■□□□□ 0.39
ATG3-202ENST00000402314 R3HCC1Q9Y3T6 440 aaKnown RBP17.47■□□□□ 0.39
ATG3-202ENST00000402314 API5Q9BZZ5 524 aaKnown RBP17.47■□□□□ 0.39
ATG3-202ENST00000402314 NECTIN2Q92692 538 aa17.46■□□□□ 0.39
ATG3-202ENST00000402314 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.46■□□□□ 0.39
ATG3-202ENST00000402314 F6X3S4 739 aa17.46■□□□□ 0.39
ATG3-202ENST00000402314 NASPP49321 788 aaPredicted RBP17.46■□□□□ 0.39
ATG3-202ENST00000402314 MTHFSDQ2M296 383 aaKnown RBP17.46■□□□□ 0.39
ATG3-202ENST00000402314 DDX49Q9Y6V7 483 aaKnown RBP17.46■□□□□ 0.39
ATG3-202ENST00000402314 PLEKHG3A1L390 1219 aa17.45■□□□□ 0.38
ATG3-202ENST00000402314 CHL1O00533 1208 aa17.45■□□□□ 0.38
ATG3-202ENST00000402314 SMARCA5O60264 1052 aaPredicted RBP17.45■□□□□ 0.38
ATG3-202ENST00000402314 TBC1D9Q6ZT07 1266 aa17.45■□□□□ 0.38
ATG3-202ENST00000402314 G2E3Q7L622 706 aa17.45■□□□□ 0.38
ATG3-202ENST00000402314 LTV1Q96GA3 475 aaPredicted RBP17.45■□□□□ 0.38
ATG3-202ENST00000402314 CHAMP1Q96JM3 812 aa17.45■□□□□ 0.38
ATG3-202ENST00000402314 PIK3R4Q99570 1358 aa17.45■□□□□ 0.38
ATG3-202ENST00000402314 GCC1Q96CN9 775 aa17.45■□□□□ 0.38
ATG3-202ENST00000402314 USP6P35125 1406 aa17.45■□□□□ 0.38
ATG3-202ENST00000402314 SLC4A10Q6U841 1118 aa17.45■□□□□ 0.38
ATG3-202ENST00000402314 GBP4Q96PP9 640 aa17.45■□□□□ 0.38
ATG3-202ENST00000402314 MEIS3Q99687 375 aa17.45■□□□□ 0.38
ATG3-202ENST00000402314 SLC4A2P04920 1241 aa17.44■□□□□ 0.38
ATG3-202ENST00000402314 BMP2KLQ5H9B9 411 aa17.44■□□□□ 0.38
ATG3-202ENST00000402314 FOXD4L5Q5VV16 416 aaPredicted RBP17.44■□□□□ 0.38
ATG3-202ENST00000402314 FOXD4L4Q8WXT5 416 aaPredicted RBP17.44■□□□□ 0.38
ATG3-202ENST00000402314 EID1Q9Y6B2 187 aa17.44■□□□□ 0.38
ATG3-202ENST00000402314 C3P01024 1663 aa17.44■□□□□ 0.38
ATG3-202ENST00000402314 MPNDQ8N594 471 aa17.44■□□□□ 0.38
ATG3-202ENST00000402314 MON2Q7Z3U7 1717 aa17.44■□□□□ 0.38
ATG3-202ENST00000402314 GSPT1P15170 499 aaKnown RBP17.43■□□□□ 0.38
ATG3-202ENST00000402314 AMPHP49418 695 aa17.43■□□□□ 0.38
ATG3-202ENST00000402314 XPCQ01831 940 aaPredicted RBP17.43■□□□□ 0.38
ATG3-202ENST00000402314 OVOS2A0A0J9YW53 1432 aa17.43■□□□□ 0.38
ATG3-202ENST00000402314 OVOS2Q6IE36 1432 aa17.43■□□□□ 0.38
ATG3-202ENST00000402314 KIF13AQ9H1H9 1805 aa17.43■□□□□ 0.38
ATG3-202ENST00000402314 MSNP26038 577 aaKnown RBP17.42■□□□□ 0.38
ATG3-202ENST00000402314 TPRNQ4KMQ1 711 aa17.42■□□□□ 0.38
ATG3-202ENST00000402314 NLRP6P59044 892 aa17.42■□□□□ 0.38
ATG3-202ENST00000402314 EYA1Q99502 592 aa17.42■□□□□ 0.38
ATG3-202ENST00000402314 KIF2CQ99661 725 aa17.42■□□□□ 0.38
ATG3-202ENST00000402314 C14orf37Q86TY3 774 aa17.41■□□□□ 0.38
ATG3-202ENST00000402314 UBR1Q8IWV7 1749 aa17.41■□□□□ 0.38
ATG3-202ENST00000402314 GAS2L2Q8NHY3 880 aa17.41■□□□□ 0.38
ATG3-202ENST00000402314 TSPYL4Q9UJ04 414 aa17.41■□□□□ 0.38
ATG3-202ENST00000402314 ANP32BQ92688 251 aaKnown RBP17.41■□□□□ 0.38
ATG3-202ENST00000402314 MSH6P52701 1360 aa17.4■□□□□ 0.38
ATG3-202ENST00000402314 PLEKHG1Q9ULL1 1385 aa17.4■□□□□ 0.38
ATG3-202ENST00000402314 MCTP1Q6DN14 999 aa17.4■□□□□ 0.38
ATG3-202ENST00000402314 CAVIN1Q6NZI2 390 aaKnown RBP17.4■□□□□ 0.38
ATG3-202ENST00000402314 PLEKHM2Q8IWE5 1019 aa17.4■□□□□ 0.38
ATG3-202ENST00000402314 ITSN1Q15811 1721 aa17.4■□□□□ 0.38
ATG3-202ENST00000402314 PEAK1Q9H792 1746 aa17.4■□□□□ 0.38
ATG3-202ENST00000402314 RBM25P49756 843 aaKnown RBP17.39■□□□□ 0.38
ATG3-202ENST00000402314 PRDM10Q9NQV6 1147 aa17.39■□□□□ 0.38
ATG3-202ENST00000402314 INTS3Q68E01 1043 aaKnown RBP17.39■□□□□ 0.37
ATG3-202ENST00000402314 USHBP1Q8N6Y0 703 aa17.39■□□□□ 0.37
ATG3-202ENST00000402314 RTF1Q92541 710 aaKnown RBP17.39■□□□□ 0.37
ATG3-202ENST00000402314 AKAP12Q02952 1782 aa17.39■□□□□ 0.37
ATG3-202ENST00000402314 RGS12O14924 1447 aa17.39■□□□□ 0.37
ATG3-202ENST00000402314 CHMP4BQ9H444 224 aaKnown RBP17.39■□□□□ 0.37
ATG3-202ENST00000402314 KCNA6P17658 529 aa17.38■□□□□ 0.37
ATG3-202ENST00000402314 RAB3GAP1Q15042 981 aa17.38■□□□□ 0.37
ATG3-202ENST00000402314 CEP85Q6P2H3 762 aa17.38■□□□□ 0.37
ATG3-202ENST00000402314 DCTPP1Q9H773 170 aa17.38■□□□□ 0.37
ATG3-202ENST00000402314 PDCL3Q9H2J4 239 aa17.38■□□□□ 0.37
ATG3-202ENST00000402314 AK9Q5TCS8 1911 aa17.38■□□□□ 0.37
ATG3-202ENST00000402314 PKP1Q13835 747 aa17.37■□□□□ 0.37
ATG3-202ENST00000402314 RIMS1Q86UR5 1692 aaKnown RBP17.37■□□□□ 0.37
ATG3-202ENST00000402314 RBM27Q9P2N5 1060 aaKnown RBP17.37■□□□□ 0.37
ATG3-202ENST00000402314 KNDC1Q76NI1 1749 aa17.37■□□□□ 0.37
ATG3-202ENST00000402314 TPM2P07951 284 aa17.37■□□□□ 0.37
ATG3-202ENST00000402314 TSHZ3Q63HK5 1081 aa17.37■□□□□ 0.37
ATG3-202ENST00000402314 ZSCAN30Q86W11 494 aa17.37■□□□□ 0.37
ATG3-202ENST00000402314 ANKRD44Q8N8A2 993 aa17.36■□□□□ 0.37
ATG3-202ENST00000402314 CRB1P82279 1406 aa17.36■□□□□ 0.37
ATG3-202ENST00000402314 DDIT3P35638 169 aa17.35■□□□□ 0.37
ATG3-202ENST00000402314 JARID2Q92833 1246 aaPredicted RBP17.35■□□□□ 0.37
ATG3-202ENST00000402314 USP31Q70CQ4 1352 aa17.35■□□□□ 0.37
ATG3-202ENST00000402314 ATP10DQ9P241 1426 aa17.35■□□□□ 0.37
ATG3-202ENST00000402314 RTL1A6NKG5 1358 aa17.35■□□□□ 0.37
ATG3-202ENST00000402314 FOXD4L6Q3SYB3 417 aaPredicted RBP17.34■□□□□ 0.37
ATG3-202ENST00000402314 FOXD4L3Q6VB84 417 aaPredicted RBP17.34■□□□□ 0.37
ATG3-202ENST00000402314 RNF214Q8ND24 703 aa17.34■□□□□ 0.37
ATG3-202ENST00000402314 CDC45O75419 566 aa17.34■□□□□ 0.37
ATG3-202ENST00000402314 SSH2Q76I76 1423 aa17.34■□□□□ 0.37
ATG3-202ENST00000402314 A0A0U1RQG5 324 aaPredicted RBP17.34■□□□□ 0.37
ATG3-202ENST00000402314 CCDC173Q0VFZ6 552 aa17.34■□□□□ 0.37
ATG3-202ENST00000402314 ABTB2Q8N961 1025 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms