RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 SRGAP3O43295 1099 aa16.5■□□□□ 0.23
SIRPA-203ENST00000400068 NEXNQ0ZGT2 675 aa16.5■□□□□ 0.23
SIRPA-203ENST00000400068 MAP3K4Q9Y6R4 1608 aa16.5■□□□□ 0.23
SIRPA-203ENST00000400068 HECW2Q9P2P5 1572 aa16.5■□□□□ 0.23
SIRPA-203ENST00000400068 CCT4P50991 539 aaKnown RBP16.5■□□□□ 0.23
SIRPA-203ENST00000400068 G2E3Q7L622 706 aa16.5■□□□□ 0.23
SIRPA-203ENST00000400068 RBM42Q9BTD8 480 aaKnown RBP16.5■□□□□ 0.23
SIRPA-203ENST00000400068 SRCIN1Q9C0H9 1055 aa16.5■□□□□ 0.23
SIRPA-203ENST00000400068 FLIIQ13045 1269 aa16.49■□□□□ 0.23
SIRPA-203ENST00000400068 GORABQ5T7V8 394 aa16.49■□□□□ 0.23
SIRPA-203ENST00000400068 LRRFIP2Q9Y608 721 aaKnown RBP16.49■□□□□ 0.23
SIRPA-203ENST00000400068 MCTP1Q6DN14 999 aa16.49■□□□□ 0.23
SIRPA-203ENST00000400068 GPATCH3Q96I76 525 aa16.49■□□□□ 0.23
SIRPA-203ENST00000400068 TBC1D32Q96NH3 1257 aa16.49■□□□□ 0.23
SIRPA-203ENST00000400068 CEP152O94986 1710 aa16.49■□□□□ 0.23
SIRPA-203ENST00000400068 TAF7Q15545 349 aaPredicted RBP16.49■□□□□ 0.23
SIRPA-203ENST00000400068 TBC1D9Q6ZT07 1266 aa16.49■□□□□ 0.23
SIRPA-203ENST00000400068 SHROOM2Q13796 1616 aa16.48■□□□□ 0.23
SIRPA-203ENST00000400068 HDAC1Q13547 482 aaPredicted RBP16.48■□□□□ 0.23
SIRPA-203ENST00000400068 LRRCC1Q9C099 1032 aa16.48■□□□□ 0.23
SIRPA-203ENST00000400068 CHRNA2Q15822 529 aa16.48■□□□□ 0.23
SIRPA-203ENST00000400068 DDX54Q8TDD1 881 aaKnown RBP16.48■□□□□ 0.23
SIRPA-203ENST00000400068 CHMP4AQ9BY43 222 aa16.48■□□□□ 0.23
SIRPA-203ENST00000400068 TRAK2O60296 914 aa16.47■□□□□ 0.23
SIRPA-203ENST00000400068 NUCB1Q02818 461 aa16.47■□□□□ 0.23
SIRPA-203ENST00000400068 RPAP2Q8IXW5 612 aaPredicted RBP16.47■□□□□ 0.23
SIRPA-203ENST00000400068 G3BP1Q13283 466 aaKnown RBP eCLIP16.47■□□□□ 0.23
SIRPA-203ENST00000400068 DDX11L8A8MPP1 907 aa16.47■□□□□ 0.23
SIRPA-203ENST00000400068 JARID2Q92833 1246 aaPredicted RBP16.47■□□□□ 0.23
SIRPA-203ENST00000400068 ABCA6Q8N139 1617 aa16.47■□□□□ 0.23
SIRPA-203ENST00000400068 INSRP06213 1382 aa16.47■□□□□ 0.23
SIRPA-203ENST00000400068 OTUD7AQ8TE49 926 aaPredicted RBP16.46■□□□□ 0.23
SIRPA-203ENST00000400068 PRR36Q9H6K5 1346 aa16.46■□□□□ 0.23
SIRPA-203ENST00000400068 CABLES1Q8TDN4 633 aa16.46■□□□□ 0.23
SIRPA-203ENST00000400068 PIP4K2AP48426 406 aaPredicted RBP16.46■□□□□ 0.22
SIRPA-203ENST00000400068 ZBTB7BO15156 539 aaPredicted RBP16.45■□□□□ 0.22
SIRPA-203ENST00000400068 DDX58O95786 925 aaKnown RBP16.45■□□□□ 0.22
SIRPA-203ENST00000400068 UPF3BQ9BZI7 483 aaKnown RBP16.45■□□□□ 0.22
SIRPA-203ENST00000400068 ABCA9Q8IUA7 1624 aa16.44■□□□□ 0.22
SIRPA-203ENST00000400068 GOLGA6L4A6NEF3 574 aa16.44■□□□□ 0.22
SIRPA-203ENST00000400068 NPHP1O15259 732 aa16.44■□□□□ 0.22
SIRPA-203ENST00000400068 LARP6Q9BRS8 491 aaKnown RBP16.44■□□□□ 0.22
SIRPA-203ENST00000400068 PPRC1Q5VV67 1664 aaKnown RBP16.44■□□□□ 0.22
SIRPA-203ENST00000400068 CLASRPQ8N2M8 674 aaKnown RBP16.43■□□□□ 0.22
SIRPA-203ENST00000400068 NEUROD6Q96NK8 337 aa16.43■□□□□ 0.22
SIRPA-203ENST00000400068 ORAI2Q96SN7 254 aa16.43■□□□□ 0.22
SIRPA-203ENST00000400068 TMEM2Q9UHN6 1383 aa16.43■□□□□ 0.22
SIRPA-203ENST00000400068 SMC5Q8IY18 1101 aa16.43■□□□□ 0.22
SIRPA-203ENST00000400068 ARAP3Q8WWN8 1544 aa16.43■□□□□ 0.22
SIRPA-203ENST00000400068 PI4KAP2A4QPH2 592 aa16.43■□□□□ 0.22
SIRPA-203ENST00000400068 HSP90B1P14625 803 aaKnown RBP16.43■□□□□ 0.22
SIRPA-203ENST00000400068 PI4KAP1Q8N8J0 262 aa16.43■□□□□ 0.22
SIRPA-203ENST00000400068 EDC4Q6P2E9 1401 aaKnown RBP16.42■□□□□ 0.22
SIRPA-203ENST00000400068 ARID3AQ99856 593 aa16.42■□□□□ 0.22
SIRPA-203ENST00000400068 ROBO2Q9HCK4 1378 aa16.42■□□□□ 0.22
SIRPA-203ENST00000400068 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.42■□□□□ 0.22
SIRPA-203ENST00000400068 TATP17735 454 aaPredicted RBP16.42■□□□□ 0.22
SIRPA-203ENST00000400068 SLC39A6Q13433 755 aa16.42■□□□□ 0.22
SIRPA-203ENST00000400068 K7ELQ4 463 aaPredicted RBP16.42■□□□□ 0.22
SIRPA-203ENST00000400068 PTCD1O75127 700 aaKnown RBP16.42■□□□□ 0.22
SIRPA-203ENST00000400068 DDX17Q92841 729 aaKnown RBP16.42■□□□□ 0.22
SIRPA-203ENST00000400068 CCDC85AQ96PX6 553 aaPredicted RBP16.42■□□□□ 0.22
SIRPA-203ENST00000400068 KAT6BQ8WYB5 2073 aa16.42■□□□□ 0.22
SIRPA-203ENST00000400068 ERC2O15083 957 aa16.41■□□□□ 0.22
SIRPA-203ENST00000400068 MCM4P33991 863 aa16.41■□□□□ 0.22
SIRPA-203ENST00000400068 KRT28Q7Z3Y7 464 aa16.41■□□□□ 0.22
SIRPA-203ENST00000400068 BBXQ8WY36 941 aaPredicted RBP16.41■□□□□ 0.22
SIRPA-203ENST00000400068 HDAC5Q9UQL6 1122 aa16.41■□□□□ 0.22
SIRPA-203ENST00000400068 TOM1L2Q6ZVM7 507 aa16.41■□□□□ 0.22
SIRPA-203ENST00000400068 PHAXQ9H814 394 aaKnown RBP16.41■□□□□ 0.22
SIRPA-203ENST00000400068 CWC27Q6UX04 472 aaKnown RBP16.41■□□□□ 0.22
SIRPA-203ENST00000400068 ZFYVE9O95405 1425 aa16.41■□□□□ 0.22
SIRPA-203ENST00000400068 FAM177BA6PVY3 158 aa16.4■□□□□ 0.22
SIRPA-203ENST00000400068 FOSBP53539 338 aa16.4■□□□□ 0.22
SIRPA-203ENST00000400068 BMP2KLQ5H9B9 411 aa16.4■□□□□ 0.22
SIRPA-203ENST00000400068 PRDM11Q9NQV5 511 aa16.4■□□□□ 0.22
SIRPA-203ENST00000400068 CHPF2Q9P2E5 772 aa16.4■□□□□ 0.22
SIRPA-203ENST00000400068 DNTTIP2Q5QJE6 756 aaKnown RBP16.4■□□□□ 0.22
SIRPA-203ENST00000400068 ARHGAP45Q92619 1136 aa16.4■□□□□ 0.22
SIRPA-203ENST00000400068 HOXC9P31274 260 aa16.4■□□□□ 0.22
SIRPA-203ENST00000400068 KCNH5Q8NCM2 988 aa16.39■□□□□ 0.21
SIRPA-203ENST00000400068 TBX22Q9Y458 520 aa16.39■□□□□ 0.21
SIRPA-203ENST00000400068 KIDINS220Q9ULH0 1771 aa16.39■□□□□ 0.21
SIRPA-203ENST00000400068 MX1P20591 662 aa16.39■□□□□ 0.21
SIRPA-203ENST00000400068 SDSP20132 328 aa16.39■□□□□ 0.21
SIRPA-203ENST00000400068 HSPA2P54652 639 aa16.39■□□□□ 0.21
SIRPA-203ENST00000400068 ANKRD24Q8TF21 1146 aa16.39■□□□□ 0.21
SIRPA-203ENST00000400068 RABEP1Q15276 862 aa16.38■□□□□ 0.21
SIRPA-203ENST00000400068 DNAJC2Q99543 621 aaKnown RBP16.38■□□□□ 0.21
SIRPA-203ENST00000400068 FLT4P35916 1363 aa16.38■□□□□ 0.21
SIRPA-203ENST00000400068 CABP4P57796 275 aa16.38■□□□□ 0.21
SIRPA-203ENST00000400068 LGR6Q9HBX8 967 aa16.38■□□□□ 0.21
SIRPA-203ENST00000400068 INO80Q9ULG1 1556 aaPredicted RBP16.38■□□□□ 0.21
SIRPA-203ENST00000400068 PRPF40AO75400 957 aaKnown RBP16.37■□□□□ 0.21
SIRPA-203ENST00000400068 TTC21AQ8NDW8 1320 aa16.37■□□□□ 0.21
SIRPA-203ENST00000400068 VPS37CA5D8V6 355 aaPredicted RBP16.37■□□□□ 0.21
SIRPA-203ENST00000400068 PPP1R42Q7Z4L9 355 aa16.37■□□□□ 0.21
SIRPA-203ENST00000400068 FSD1Q9BTV5 496 aa16.37■□□□□ 0.21
SIRPA-203ENST00000400068 CAVIN1Q6NZI2 390 aaKnown RBP16.37■□□□□ 0.21
SIRPA-203ENST00000400068 CEP85Q6P2H3 762 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms