RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 SRCIN1Q9C0H9 1055 aa16.24■□□□□ 0.19
VAPA-202ENST00000400000 POLR3DP05423 398 aaPredicted RBP16.24■□□□□ 0.19
VAPA-202ENST00000400000 METTL24Q5JXM2 366 aa16.24■□□□□ 0.19
VAPA-202ENST00000400000 SCAPERQ9BY12 1400 aa16.24■□□□□ 0.19
VAPA-202ENST00000400000 CCDC191Q8NCU4 936 aa16.24■□□□□ 0.19
VAPA-202ENST00000400000 CRACR2BQ8N4Y2 399 aaPredicted RBP16.24■□□□□ 0.19
VAPA-202ENST00000400000 JARID2Q92833 1246 aaPredicted RBP16.23■□□□□ 0.19
VAPA-202ENST00000400000 NGLY1Q96IV0 654 aa16.23■□□□□ 0.19
VAPA-202ENST00000400000 PDRG1Q9NUG6 133 aa16.23■□□□□ 0.19
VAPA-202ENST00000400000 IGHMBP2P38935 993 aaKnown RBP16.23■□□□□ 0.19
VAPA-202ENST00000400000 EXOC6BQ9Y2D4 811 aa16.23■□□□□ 0.19
VAPA-202ENST00000400000 HIP1O00291 1037 aa16.23■□□□□ 0.19
VAPA-202ENST00000400000 AKNAQ7Z591 1439 aa16.23■□□□□ 0.19
VAPA-202ENST00000400000 CCDC144CPQ8IYA2 1237 aa16.22■□□□□ 0.19
VAPA-202ENST00000400000 GPTP24298 496 aa16.22■□□□□ 0.19
VAPA-202ENST00000400000 MYD88Q99836 296 aa16.22■□□□□ 0.19
VAPA-202ENST00000400000 KLHL10Q6JEL2 608 aa16.22■□□□□ 0.19
VAPA-202ENST00000400000 MYOM3Q5VTT5 1437 aa16.22■□□□□ 0.19
VAPA-202ENST00000400000 CASTP20810 708 aaKnown RBP16.21■□□□□ 0.19
VAPA-202ENST00000400000 CEBPAP49715 358 aaPredicted RBP16.21■□□□□ 0.19
VAPA-202ENST00000400000 STIM1Q13586 685 aa16.21■□□□□ 0.19
VAPA-202ENST00000400000 ANKRD50Q9ULJ7 1429 aa16.21■□□□□ 0.19
VAPA-202ENST00000400000 RAB11FIP4Q86YS3 637 aa16.21■□□□□ 0.19
VAPA-202ENST00000400000 FERMT3Q86UX7 667 aa16.21■□□□□ 0.19
VAPA-202ENST00000400000 AIDAQ96BJ3 306 aa16.21■□□□□ 0.19
VAPA-202ENST00000400000 RTEL1-TNFRSF6BF6WH68 1400 aa16.21■□□□□ 0.19
VAPA-202ENST00000400000 ATAD2BQ9ULI0 1458 aa16.21■□□□□ 0.18
VAPA-202ENST00000400000 BOLA2Q9H3K6 86 aa16.21■□□□□ 0.18
VAPA-202ENST00000400000 TMOD3Q9NYL9 352 aa16.2■□□□□ 0.18
VAPA-202ENST00000400000 FILIP1Q7Z7B0 1213 aa16.2■□□□□ 0.18
VAPA-202ENST00000400000 SPATA32Q96LK8 384 aa16.2■□□□□ 0.18
VAPA-202ENST00000400000 CEP126Q9P2H0 1117 aa16.2■□□□□ 0.18
VAPA-202ENST00000400000 CCDC96Q2M329 555 aa16.19■□□□□ 0.18
VAPA-202ENST00000400000 ERLIN2O94905 339 aa16.19■□□□□ 0.18
VAPA-202ENST00000400000 MKNK2Q9HBH9 465 aa16.19■□□□□ 0.18
VAPA-202ENST00000400000 PRG4Q92954 1404 aaPredicted RBP16.19■□□□□ 0.18
VAPA-202ENST00000400000 BLOC1S2Q6QNY1 142 aa16.19■□□□□ 0.18
VAPA-202ENST00000400000 VAT1LQ9HCJ6 419 aa16.19■□□□□ 0.18
VAPA-202ENST00000400000 TMOD2Q9NZR1 351 aa16.19■□□□□ 0.18
VAPA-202ENST00000400000 GOLGA6L10A6NI86 522 aa16.18■□□□□ 0.18
VAPA-202ENST00000400000 CCDC113Q9H0I3 377 aa16.18■□□□□ 0.18
VAPA-202ENST00000400000 NOL7Q9UMY1 257 aaKnown RBP16.18■□□□□ 0.18
VAPA-202ENST00000400000 CEP57L1Q8IYX8 460 aa16.18■□□□□ 0.18
VAPA-202ENST00000400000 TMEM87AQ8NBN3 555 aa16.18■□□□□ 0.18
VAPA-202ENST00000400000 KIAA1328Q86T90 577 aa16.18■□□□□ 0.18
VAPA-202ENST00000400000 ERCC4Q92889 916 aaPredicted RBP16.18■□□□□ 0.18
VAPA-202ENST00000400000 EIF5P55010 431 aaKnown RBP16.18■□□□□ 0.18
VAPA-202ENST00000400000 ZNF622Q969S3 477 aaKnown RBP eCLIP16.18■□□□□ 0.183e-8■■■□□ 15.1
VAPA-202ENST00000400000 RANBP6O60518 1105 aaKnown RBP16.17■□□□□ 0.18
VAPA-202ENST00000400000 CCT4P50991 539 aaKnown RBP16.17■□□□□ 0.18
VAPA-202ENST00000400000 CCDC83Q8IWF9 413 aa16.17■□□□□ 0.18
VAPA-202ENST00000400000 CCDC8Q9H0W5 538 aaPredicted RBP16.17■□□□□ 0.18
VAPA-202ENST00000400000 ERICH4A6NGS2 130 aa16.16■□□□□ 0.18
VAPA-202ENST00000400000 FOXO3O43524 673 aa16.16■□□□□ 0.18
VAPA-202ENST00000400000 LETM1O95202 739 aaPredicted RBP16.16■□□□□ 0.18
VAPA-202ENST00000400000 MRE11P49959 708 aa16.16■□□□□ 0.18
VAPA-202ENST00000400000 PDCP20941 246 aa16.16■□□□□ 0.18
VAPA-202ENST00000400000 CHD1LQ86WJ1 897 aa16.16■□□□□ 0.18
VAPA-202ENST00000400000 F6X3S4 739 aa16.16■□□□□ 0.18
VAPA-202ENST00000400000 ACSBG1Q96GR2 724 aa16.16■□□□□ 0.18
VAPA-202ENST00000400000 MACROD2A1Z1Q3 448 aa16.16■□□□□ 0.18
VAPA-202ENST00000400000 STARD3NLO95772 234 aa16.16■□□□□ 0.18
VAPA-202ENST00000400000 CCDC192P0DO97 292 aa16.16■□□□□ 0.18
VAPA-202ENST00000400000 SPTY2D1Q68D10 685 aaPredicted RBP16.16■□□□□ 0.18
VAPA-202ENST00000400000 RPGRQ92834 1020 aaKnown RBP16.16■□□□□ 0.18
VAPA-202ENST00000400000 ISM2Q6H9L7 571 aa16.15■□□□□ 0.18
VAPA-202ENST00000400000 DZIP1Q86YF9 867 aaKnown RBP16.15■□□□□ 0.18
VAPA-202ENST00000400000 IL27Q8NEV9 243 aa16.15■□□□□ 0.18
VAPA-202ENST00000400000 ZBTB9Q96C00 473 aa16.15■□□□□ 0.18
VAPA-202ENST00000400000 RABEP1Q15276 862 aa16.15■□□□□ 0.18
VAPA-202ENST00000400000 LEKR1Q6ZMV7 388 aa16.15■□□□□ 0.18
VAPA-202ENST00000400000 JMYQ8N9B5 988 aa16.15■□□□□ 0.18
VAPA-202ENST00000400000 C6orf229H3BNL8 230 aa16.15■□□□□ 0.18
VAPA-202ENST00000400000 ZSCAN25Q6NSZ9 544 aa16.15■□□□□ 0.18
VAPA-202ENST00000400000 MMRN2Q9H8L6 949 aa16.15■□□□□ 0.18
VAPA-202ENST00000400000 BMP2KQ9NSY1 1161 aaPredicted RBP16.14■□□□□ 0.18
VAPA-202ENST00000400000 SEC63Q9UGP8 760 aaKnown RBP16.14■□□□□ 0.18
VAPA-202ENST00000400000 GCC1Q96CN9 775 aa16.14■□□□□ 0.17
VAPA-202ENST00000400000 RRBP1Q9P2E9 1410 aaKnown RBP16.14■□□□□ 0.17
VAPA-202ENST00000400000 CTNNBL1Q8WYA6 563 aaPredicted RBP16.14■□□□□ 0.17
VAPA-202ENST00000400000 GOPCQ9HD26 462 aa16.14■□□□□ 0.17
VAPA-202ENST00000400000 FGD6Q6ZV73 1430 aa16.14■□□□□ 0.17
VAPA-202ENST00000400000 FYCO1Q9BQS8 1478 aa16.14■□□□□ 0.17
VAPA-202ENST00000400000 SMARCA4P51532 1647 aa16.14■□□□□ 0.17
VAPA-202ENST00000400000 K7ELQ4 463 aaPredicted RBP16.14■□□□□ 0.17
VAPA-202ENST00000400000 KRT85P78386 507 aa16.14■□□□□ 0.17
VAPA-202ENST00000400000 PRPF40BQ6NWY9 871 aaKnown RBP16.14■□□□□ 0.17
VAPA-202ENST00000400000 ERBINQ96RT1 1412 aa16.13■□□□□ 0.17
VAPA-202ENST00000400000 CCT2P78371 535 aaKnown RBP16.13■□□□□ 0.17
VAPA-202ENST00000400000 GBP2P32456 591 aaPredicted RBP16.13■□□□□ 0.17
VAPA-202ENST00000400000 ZRSR2Q15696 482 aaKnown RBP16.13■□□□□ 0.17
VAPA-202ENST00000400000 TMEM57Q8N5G2 664 aa16.13■□□□□ 0.17
VAPA-202ENST00000400000 GNAT3A8MTJ3 354 aa16.13■□□□□ 0.17
VAPA-202ENST00000400000 IMMTQ16891 758 aaKnown RBP16.13■□□□□ 0.17
VAPA-202ENST00000400000 CPLX3Q8WVH0 158 aa16.13■□□□□ 0.17
VAPA-202ENST00000400000 F8W031 263 aaPredicted RBP16.12■□□□□ 0.17
VAPA-202ENST00000400000 ZBTB3Q9H5J0 574 aa16.12■□□□□ 0.17
VAPA-202ENST00000400000 CCDC102AQ96A19 550 aa16.12■□□□□ 0.17
VAPA-202ENST00000400000 NUDT16Q96DE0 195 aaKnown RBP16.12■□□□□ 0.17
VAPA-202ENST00000400000 CCDC184Q52MB2 194 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms