RNA–Protein interactions for RNA: ENST00000399953.7

NPRL3-201, Transcript of NPR3 like, GATOR1 complex subunit, humanhuman

TSL 1 (best) BASIC

Gene NPRL3, Length 2,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPRL3-201ENST00000399953 RNF216Q9NWF9 866 aaPredicted RBP19.92■□□□□ 0.78
NPRL3-201ENST00000399953 DISP1Q96F81 1524 aa19.91■□□□□ 0.78
NPRL3-201ENST00000399953 ATP10AO60312 1499 aa19.91■□□□□ 0.78
NPRL3-201ENST00000399953 REC8O95072 547 aa19.91■□□□□ 0.78
NPRL3-201ENST00000399953 PTGS1P23219 599 aa19.91■□□□□ 0.78
NPRL3-201ENST00000399953 MCM2P49736 904 aa19.91■□□□□ 0.78
NPRL3-201ENST00000399953 PLEKHM2Q8IWE5 1019 aa19.91■□□□□ 0.78
NPRL3-201ENST00000399953 ST7Q9NRC1 585 aa19.91■□□□□ 0.78
NPRL3-201ENST00000399953 RSPH14Q9UHP6 348 aa19.91■□□□□ 0.78
NPRL3-201ENST00000399953 TMEM87AQ8NBN3 555 aa19.91■□□□□ 0.78
NPRL3-201ENST00000399953 SLFNL1Q499Z3 407 aa19.9■□□□□ 0.78
NPRL3-201ENST00000399953 RASSF4Q9H2L5 321 aa19.9■□□□□ 0.78
NPRL3-201ENST00000399953 ARHGEF5Q12774 1597 aa19.9■□□□□ 0.78
NPRL3-201ENST00000399953 ZNF518AQ6AHZ1 1483 aa19.9■□□□□ 0.78
NPRL3-201ENST00000399953 CUL4AQ13619 759 aa19.9■□□□□ 0.78
NPRL3-201ENST00000399953 CFAP53Q96M91 514 aa19.9■□□□□ 0.78
NPRL3-201ENST00000399953 ZBTB7BO15156 539 aaPredicted RBP19.89■□□□□ 0.78
NPRL3-201ENST00000399953 INTS4Q96HW7 963 aaKnown RBP19.89■□□□□ 0.78
NPRL3-201ENST00000399953 FUCA2Q9BTY2 467 aa19.89■□□□□ 0.78
NPRL3-201ENST00000399953 IFT140Q96RY7 1462 aa19.89■□□□□ 0.78
NPRL3-201ENST00000399953 FBXO38Q6PIJ6 1188 aa19.89■□□□□ 0.77
NPRL3-201ENST00000399953 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.89■□□□□ 0.77
NPRL3-201ENST00000399953 SOX12O15370 315 aa19.89■□□□□ 0.77
NPRL3-201ENST00000399953 FOXD4L6Q3SYB3 417 aaPredicted RBP19.89■□□□□ 0.77
NPRL3-201ENST00000399953 FOXD4L3Q6VB84 417 aaPredicted RBP19.89■□□□□ 0.77
NPRL3-201ENST00000399953 C1orf115Q9H7X2 142 aa19.89■□□□□ 0.77
NPRL3-201ENST00000399953 TCHHQ07283 1943 aa19.88■□□□□ 0.77
NPRL3-201ENST00000399953 U2SURPO15042 1029 aaKnown RBP19.88■□□□□ 0.77
NPRL3-201ENST00000399953 NOP2P46087 812 aaKnown RBP19.88■□□□□ 0.77
NPRL3-201ENST00000399953 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.88■□□□□ 0.77
NPRL3-201ENST00000399953 NEK4P51957 841 aa19.87■□□□□ 0.77
NPRL3-201ENST00000399953 ALDH1L2Q3SY69 923 aa19.87■□□□□ 0.77
NPRL3-201ENST00000399953 CTR9Q6PD62 1173 aa19.87■□□□□ 0.77
NPRL3-201ENST00000399953 IQGAP3Q86VI3 1631 aa19.87■□□□□ 0.77
NPRL3-201ENST00000399953 ERVK-7P63135 1459 aa19.87■□□□□ 0.77
NPRL3-201ENST00000399953 WDR33Q9C0J8 1336 aaKnown RBP19.86■□□□□ 0.77
NPRL3-201ENST00000399953 BMS1Q14692 1282 aaKnown RBP19.86■□□□□ 0.77
NPRL3-201ENST00000399953 SIRT2Q8IXJ6 389 aa19.86■□□□□ 0.77
NPRL3-201ENST00000399953 DUOX2Q9NRD8 1548 aa19.86■□□□□ 0.77
NPRL3-201ENST00000399953 PSEN1P49768 467 aa19.86■□□□□ 0.77
NPRL3-201ENST00000399953 MUM1L1Q5H9M0 696 aa19.86■□□□□ 0.77
NPRL3-201ENST00000399953 HDAC5Q9UQL6 1122 aa19.86■□□□□ 0.77
NPRL3-201ENST00000399953 HNRNPMP52272 730 aaKnown RBP eCLIP19.85■□□□□ 0.776e-7■■■■■ 28.7
NPRL3-201ENST00000399953 UBE2HP62256 183 aa19.85■□□□□ 0.77
NPRL3-201ENST00000399953 TPD52L1Q16890 204 aaPredicted RBP19.85■□□□□ 0.77
NPRL3-201ENST00000399953 CEP135Q66GS9 1140 aa19.85■□□□□ 0.77
NPRL3-201ENST00000399953 CHMP4CQ96CF2 233 aa19.85■□□□□ 0.77
NPRL3-201ENST00000399953 ZNF215Q9UL58 517 aaPredicted RBP19.85■□□□□ 0.77
NPRL3-201ENST00000399953 DHX16O60231 1041 aaKnown RBP19.84■□□□□ 0.77
NPRL3-201ENST00000399953 U2AF1L5P0DN76 240 aaPredicted RBP19.84■□□□□ 0.77
NPRL3-201ENST00000399953 GTF2A1P52655 376 aaPredicted RBP19.84■□□□□ 0.77
NPRL3-201ENST00000399953 U2AF1Q01081 240 aaKnown RBP eCLIP19.84■□□□□ 0.77
NPRL3-201ENST00000399953 CCDC186Q7Z3E2 898 aa19.84■□□□□ 0.77
NPRL3-201ENST00000399953 ERO1AQ96HE7 468 aa19.84■□□□□ 0.77
NPRL3-201ENST00000399953 IL16Q14005 1332 aa19.84■□□□□ 0.77
NPRL3-201ENST00000399953 MTHFSP49914 203 aa19.84■□□□□ 0.77
NPRL3-201ENST00000399953 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.84■□□□□ 0.77
NPRL3-201ENST00000399953 CLGNO14967 610 aa19.83■□□□□ 0.77
NPRL3-201ENST00000399953 LRMPQ12912 555 aa19.83■□□□□ 0.77
NPRL3-201ENST00000399953 GIMAP6Q6P9H5 292 aa19.83■□□□□ 0.77
NPRL3-201ENST00000399953 RTF1Q92541 710 aaKnown RBP19.83■□□□□ 0.77
NPRL3-201ENST00000399953 SPHKAPQ2M3C7 1700 aa19.83■□□□□ 0.77
NPRL3-201ENST00000399953 RNF20Q5VTR2 975 aa19.83■□□□□ 0.77
NPRL3-201ENST00000399953 TXLNBQ8N3L3 684 aa19.83■□□□□ 0.77
NPRL3-201ENST00000399953 ZNF592Q92610 1267 aa19.83■□□□□ 0.77
NPRL3-201ENST00000399953 SPAG9O60271 1321 aaKnown RBP19.83■□□□□ 0.76
NPRL3-201ENST00000399953 ELF2Q15723 593 aa19.83■□□□□ 0.76
NPRL3-201ENST00000399953 TEX35Q5T0J7 233 aa19.82■□□□□ 0.76
NPRL3-201ENST00000399953 ZNF446Q9NWS9 450 aa19.82■□□□□ 0.76
NPRL3-201ENST00000399953 NSD3Q9BZ95 1437 aa19.82■□□□□ 0.76
NPRL3-201ENST00000399953 ERC2O15083 957 aa19.82■□□□□ 0.76
NPRL3-201ENST00000399953 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.82■□□□□ 0.76
NPRL3-201ENST00000399953 V9GYY5 206 aaPredicted RBP19.82■□□□□ 0.76
NPRL3-201ENST00000399953 RPAP1Q9BWH6 1393 aaPredicted RBP19.82■□□□□ 0.76
NPRL3-201ENST00000399953 SDSP20132 328 aa19.81■□□□□ 0.76
NPRL3-201ENST00000399953 MYOM2P54296 1465 aa19.81■□□□□ 0.76
NPRL3-201ENST00000399953 ZSCAN25Q6NSZ9 544 aa19.81■□□□□ 0.76
NPRL3-201ENST00000399953 HTATSF1O43719 755 aaKnown RBP19.8■□□□□ 0.76
NPRL3-201ENST00000399953 SRPK2P78362 688 aaKnown RBP19.8■□□□□ 0.76
NPRL3-201ENST00000399953 CNPY2Q9Y2B0 182 aa19.8■□□□□ 0.76
NPRL3-201ENST00000399953 PIK3R4Q99570 1358 aa19.8■□□□□ 0.76
NPRL3-201ENST00000399953 ATAD2Q6PL18 1390 aa19.8■□□□□ 0.76
NPRL3-201ENST00000399953 CCDC192P0DO97 292 aa19.8■□□□□ 0.76
NPRL3-201ENST00000399953 BRPF1P55201 1214 aaPredicted RBP19.8■□□□□ 0.76
NPRL3-201ENST00000399953 AXDND1Q5T1B0 1012 aaPredicted RBP19.8■□□□□ 0.76
NPRL3-201ENST00000399953 ICE2Q659A1 982 aa19.8■□□□□ 0.76
NPRL3-201ENST00000399953 DRC7Q8IY82 874 aa19.8■□□□□ 0.76
NPRL3-201ENST00000399953 TRIM35Q9UPQ4 493 aa19.8■□□□□ 0.76
NPRL3-201ENST00000399953 LOC102724159A0A0B4J2E5 919 aa19.79■□□□□ 0.76
NPRL3-201ENST00000399953 PWP2Q15269 919 aaKnown RBP19.79■□□□□ 0.76
NPRL3-201ENST00000399953 SYT10Q6XYQ8 523 aa19.79■□□□□ 0.76
NPRL3-201ENST00000399953 SRCIN1Q9C0H9 1055 aa19.79■□□□□ 0.76
NPRL3-201ENST00000399953 CD109Q6YHK3 1445 aa19.79■□□□□ 0.76
NPRL3-201ENST00000399953 CASQ1P31415 396 aa19.79■□□□□ 0.76
NPRL3-201ENST00000399953 GTF3C6Q969F1 213 aa19.79■□□□□ 0.76
NPRL3-201ENST00000399953 CCDC171Q6TFL3 1326 aa19.78■□□□□ 0.76
NPRL3-201ENST00000399953 TMPOP42166 694 aaKnown RBP19.78■□□□□ 0.76
NPRL3-201ENST00000399953 TPRNQ4KMQ1 711 aa19.78■□□□□ 0.76
NPRL3-201ENST00000399953 FAM200AQ8TCP9 573 aa19.78■□□□□ 0.76
NPRL3-201ENST00000399953 SLC52A1Q9NWF4 448 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms