RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 EPS15P42566 896 aa3.89□□□□□ -1.79
KNL1-202ENST00000399668 BRPF1P55201 1214 aaPredicted RBP3.89□□□□□ -1.79
KNL1-202ENST00000399668 PDILTQ8N807 584 aa3.89□□□□□ -1.79
KNL1-202ENST00000399668 SSH1Q8WYL5 1049 aa3.89□□□□□ -1.79
KNL1-202ENST00000399668 PPP1R1BQ9UD71 204 aaPredicted RBP3.89□□□□□ -1.79
KNL1-202ENST00000399668 CTDP1Q9Y5B0 961 aaPredicted RBP3.89□□□□□ -1.79
KNL1-202ENST00000399668 URB1O60287 2271 aaKnown RBP3.89□□□□□ -1.79
KNL1-202ENST00000399668 ASXL1Q8IXJ9 1541 aa3.89□□□□□ -1.79
KNL1-202ENST00000399668 KIAA0556O60303 1618 aa3.89□□□□□ -1.79
KNL1-202ENST00000399668 NAP1L1P55209 391 aaKnown RBP3.89□□□□□ -1.79
KNL1-202ENST00000399668 TTC39AQ5SRH9 613 aa3.89□□□□□ -1.79
KNL1-202ENST00000399668 CCDC73Q6ZRK6 1079 aa3.89□□□□□ -1.79
KNL1-202ENST00000399668 ANKRD20A12PQ8NF67 263 aa3.89□□□□□ -1.79
KNL1-202ENST00000399668 CDC42BPBQ9Y5S2 1711 aa3.89□□□□□ -1.79
KNL1-202ENST00000399668 KINO60870 393 aaKnown RBP3.89□□□□□ -1.79
KNL1-202ENST00000399668 IDI1Q13907 227 aa3.89□□□□□ -1.79
KNL1-202ENST00000399668 ANKLE2Q86XL3 938 aa3.89□□□□□ -1.79
KNL1-202ENST00000399668 IL27Q8NEV9 243 aa3.89□□□□□ -1.79
KNL1-202ENST00000399668 MPHOSPH8Q99549 860 aa3.89□□□□□ -1.79
KNL1-202ENST00000399668 IPO7O95373 1038 aaKnown RBP3.89□□□□□ -1.79
KNL1-202ENST00000399668 NFE2L2Q16236 605 aa3.89□□□□□ -1.79
KNL1-202ENST00000399668 DUSP27Q5VZP5 1158 aa3.89□□□□□ -1.79
KNL1-202ENST00000399668 FBXO31Q5XUX0 539 aaPredicted RBP3.89□□□□□ -1.79
KNL1-202ENST00000399668 TRIM5Q9C035 493 aa3.89□□□□□ -1.79
KNL1-202ENST00000399668 DLG5Q8TDM6 1919 aa3.89□□□□□ -1.79
KNL1-202ENST00000399668 GPATCH8Q9UKJ3 1502 aaKnown RBP3.89□□□□□ -1.79
KNL1-202ENST00000399668 FOXO3O43524 673 aa3.88□□□□□ -1.79
KNL1-202ENST00000399668 PDCP20941 246 aa3.88□□□□□ -1.79
KNL1-202ENST00000399668 AACSQ86V21 672 aa3.88□□□□□ -1.79
KNL1-202ENST00000399668 TBC1D2BQ9UPU7 963 aa3.88□□□□□ -1.79
KNL1-202ENST00000399668 F6X3S4 739 aa3.88□□□□□ -1.79
KNL1-202ENST00000399668 MCM2P49736 904 aa3.88□□□□□ -1.79
KNL1-202ENST00000399668 K7ELQ4 463 aaPredicted RBP3.88□□□□□ -1.79
KNL1-202ENST00000399668 FCHSD2O94868 740 aa3.88□□□□□ -1.79
KNL1-202ENST00000399668 LARP6Q9BRS8 491 aaKnown RBP3.88□□□□□ -1.79
KNL1-202ENST00000399668 NAT10Q9H0A0 1025 aaKnown RBP3.88□□□□□ -1.79
KNL1-202ENST00000399668 R3HCC1Q9Y3T6 440 aaKnown RBP3.88□□□□□ -1.79
KNL1-202ENST00000399668 ADGRF5Q8IZF2 1346 aa3.88□□□□□ -1.79
KNL1-202ENST00000399668 TRIP11Q15643 1979 aa3.88□□□□□ -1.79
KNL1-202ENST00000399668 CDK5RAP2Q96SN8 1893 aa3.88□□□□□ -1.79
KNL1-202ENST00000399668 DUOX2Q9NRD8 1548 aa3.88□□□□□ -1.79
KNL1-202ENST00000399668 KDM5BQ9UGL1 1544 aa3.88□□□□□ -1.79
KNL1-202ENST00000399668 HIP1O00291 1037 aa3.88□□□□□ -1.79
KNL1-202ENST00000399668 XBP1P17861 261 aa3.88□□□□□ -1.79
KNL1-202ENST00000399668 OLFM4Q6UX06 510 aa3.88□□□□□ -1.79
KNL1-202ENST00000399668 PRDM11Q9NQV5 511 aa3.88□□□□□ -1.79
KNL1-202ENST00000399668 CASTP20810 708 aaKnown RBP3.88□□□□□ -1.79
KNL1-202ENST00000399668 RARSP54136 660 aaKnown RBP3.88□□□□□ -1.79
KNL1-202ENST00000399668 SART3Q15020 963 aaKnown RBP3.88□□□□□ -1.79
KNL1-202ENST00000399668 CCDC158Q5M9N0 1113 aa3.88□□□□□ -1.79
KNL1-202ENST00000399668 ZNF771Q7L3S4 317 aaPredicted RBP3.88□□□□□ -1.79
KNL1-202ENST00000399668 ERC1Q8IUD2 1116 aa3.88□□□□□ -1.79
KNL1-202ENST00000399668 PIBF1Q8WXW3 757 aa3.88□□□□□ -1.79
KNL1-202ENST00000399668 CCDC43Q96MW1 224 aaKnown RBP3.88□□□□□ -1.79
KNL1-202ENST00000399668 ATAD2Q6PL18 1390 aa3.88□□□□□ -1.79
KNL1-202ENST00000399668 DISP3Q9P2K9 1392 aa3.88□□□□□ -1.79
KNL1-202ENST00000399668 BRMS1Q9HCU9 246 aa3.88□□□□□ -1.79
KNL1-202ENST00000399668 SMC2O95347 1197 aa3.87□□□□□ -1.79
KNL1-202ENST00000399668 ME1P48163 572 aa3.87□□□□□ -1.79
KNL1-202ENST00000399668 RABEP1Q15276 862 aa3.87□□□□□ -1.79
KNL1-202ENST00000399668 CCDC70Q6NSX1 233 aa3.87□□□□□ -1.79
KNL1-202ENST00000399668 CYP46A1Q9Y6A2 500 aa3.87□□□□□ -1.79
KNL1-202ENST00000399668 CEBPAP49715 358 aaPredicted RBP3.87□□□□□ -1.79
KNL1-202ENST00000399668 LARP1BQ659C4 914 aaKnown RBP3.87□□□□□ -1.79
KNL1-202ENST00000399668 BOLA2Q9H3K6 86 aa3.87□□□□□ -1.79
KNL1-202ENST00000399668 QRICH2Q9H0J4 1663 aa3.87□□□□□ -1.79
KNL1-202ENST00000399668 MYH7BA7E2Y1 1941 aa3.87□□□□□ -1.79
KNL1-202ENST00000399668 CT47B1P0C2W7 299 aaPredicted RBP3.87□□□□□ -1.79
KNL1-202ENST00000399668 MRE11P49959 708 aa3.87□□□□□ -1.79
KNL1-202ENST00000399668 MPRIPQ6WCQ1 1025 aa3.87□□□□□ -1.79
KNL1-202ENST00000399668 NME9Q86XW9 330 aa3.87□□□□□ -1.79
KNL1-202ENST00000399668 CCDC47Q96A33 483 aaKnown RBP3.87□□□□□ -1.79
KNL1-202ENST00000399668 SPG7Q9UQ90 795 aa3.87□□□□□ -1.79
KNL1-202ENST00000399668 NOS1P29475 1434 aa3.87□□□□□ -1.79
KNL1-202ENST00000399668 ATP10BO94823 1461 aa3.87□□□□□ -1.79
KNL1-202ENST00000399668 FAM177A1Q8N128 213 aaPredicted RBP3.87□□□□□ -1.79
KNL1-202ENST00000399668 SRCIN1Q9C0H9 1055 aa3.87□□□□□ -1.79
KNL1-202ENST00000399668 SDK1Q7Z5N4 2213 aa3.87□□□□□ -1.79
KNL1-202ENST00000399668 ADAMTS12P58397 1594 aa3.87□□□□□ -1.79
KNL1-202ENST00000399668 WDR62O43379 1518 aa3.87□□□□□ -1.79
KNL1-202ENST00000399668 AFDNP55196 1824 aaKnown RBP3.87□□□□□ -1.79
KNL1-202ENST00000399668 VSIG10Q8N0Z9 540 aa3.87□□□□□ -1.79
KNL1-202ENST00000399668 JAKMIP1Q96N16 626 aaKnown RBP3.87□□□□□ -1.79
KNL1-202ENST00000399668 ABCF2Q9UG63 623 aa3.87□□□□□ -1.79
KNL1-202ENST00000399668 TRIM27P14373 513 aa3.87□□□□□ -1.79
KNL1-202ENST00000399668 BLOC1S2Q6QNY1 142 aa3.87□□□□□ -1.79
KNL1-202ENST00000399668 NUTM1Q86Y26 1132 aa3.87□□□□□ -1.79
KNL1-202ENST00000399668 FBXO3Q9UK99 471 aa3.87□□□□□ -1.79
KNL1-202ENST00000399668 FAM83GA6ND36 823 aa3.86□□□□□ -1.79
KNL1-202ENST00000399668 TSHZ3Q63HK5 1081 aa3.86□□□□□ -1.79
KNL1-202ENST00000399668 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.86□□□□□ -1.79
KNL1-202ENST00000399668 TSPY26PQ9H489 355 aa3.86□□□□□ -1.79
KNL1-202ENST00000399668 NUP133Q8WUM0 1156 aa3.86□□□□□ -1.79
KNL1-202ENST00000399668 DDX11Q96FC9 970 aa3.86□□□□□ -1.79
KNL1-202ENST00000399668 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.86□□□□□ -1.796e-7■■□□□ 11.4
KNL1-202ENST00000399668 TNMDQ9H2S6 317 aa3.86□□□□□ -1.79
KNL1-202ENST00000399668 CWC22Q9HCG8 908 aaKnown RBP3.86□□□□□ -1.79
KNL1-202ENST00000399668 LRRFIP2Q9Y608 721 aaKnown RBP3.86□□□□□ -1.79
KNL1-202ENST00000399668 TAF7Q15545 349 aaPredicted RBP3.86□□□□□ -1.79
KNL1-202ENST00000399668 ANKRD1Q15327 319 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms