RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 THEMISQ8N1K5 641 aaPredicted RBP28.82■■■□□ 2.2
RABGGTA-202ENST00000399409 RPAP2Q8IXW5 612 aaPredicted RBP28.81■■■□□ 2.2
RABGGTA-202ENST00000399409 NGDNQ8NEJ9 315 aaKnown RBP28.81■■■□□ 2.2
RABGGTA-202ENST00000399409 KDRP35968 1356 aa28.81■■■□□ 2.2
RABGGTA-202ENST00000399409 ANKRD44Q8N8A2 993 aa28.8■■■□□ 2.2
RABGGTA-202ENST00000399409 ANKARQ7Z5J8 1434 aa28.79■■■□□ 2.2
RABGGTA-202ENST00000399409 RTF1Q92541 710 aaKnown RBP28.78■■■□□ 2.2
RABGGTA-202ENST00000399409 XRN1Q8IZH2 1706 aaKnown RBP28.77■■■□□ 2.2
RABGGTA-202ENST00000399409 KRT24Q2M2I5 525 aa28.77■■■□□ 2.2
RABGGTA-202ENST00000399409 GAS2L2Q8NHY3 880 aa28.76■■■□□ 2.19
RABGGTA-202ENST00000399409 IGSF1Q8N6C5 1336 aa28.76■■■□□ 2.19
RABGGTA-202ENST00000399409 NCOA3Q9Y6Q9 1424 aa28.76■■■□□ 2.19
RABGGTA-202ENST00000399409 CDC45O75419 566 aa28.76■■■□□ 2.19
RABGGTA-202ENST00000399409 TBC1D9Q6ZT07 1266 aa28.76■■■□□ 2.19
RABGGTA-202ENST00000399409 ATP10DQ9P241 1426 aa28.75■■■□□ 2.19
RABGGTA-202ENST00000399409 FER1L4A9Z1Z3 1794 aa28.75■■■□□ 2.19
RABGGTA-202ENST00000399409 SOX12O15370 315 aa28.75■■■□□ 2.19
RABGGTA-202ENST00000399409 HTATSF1O43719 755 aaKnown RBP28.75■■■□□ 2.19
RABGGTA-202ENST00000399409 AMPHP49418 695 aa28.75■■■□□ 2.19
RABGGTA-202ENST00000399409 MTHFSDQ2M296 383 aaKnown RBP28.75■■■□□ 2.19
RABGGTA-202ENST00000399409 PIK3C2AO00443 1686 aa28.74■■■□□ 2.19
RABGGTA-202ENST00000399409 SPRYD3Q8NCJ5 442 aa28.73■■■□□ 2.19
RABGGTA-202ENST00000399409 PLEKHM2Q8IWE5 1019 aa28.73■■■□□ 2.19
RABGGTA-202ENST00000399409 RGPD8O14715 1765 aaPredicted RBP28.73■■■□□ 2.19
RABGGTA-202ENST00000399409 CEP85Q6P2H3 762 aa28.72■■■□□ 2.19
RABGGTA-202ENST00000399409 TSPYL4Q9UJ04 414 aa28.72■■■□□ 2.19
RABGGTA-202ENST00000399409 RTL1A6NKG5 1358 aa28.71■■■□□ 2.19
RABGGTA-202ENST00000399409 EYA1Q99502 592 aa28.71■■■□□ 2.19
RABGGTA-202ENST00000399409 MSH6P52701 1360 aa28.71■■■□□ 2.19
RABGGTA-202ENST00000399409 SLC4A2P04920 1241 aa28.71■■■□□ 2.19
RABGGTA-202ENST00000399409 MCM4P33991 863 aa28.71■■■□□ 2.19
RABGGTA-202ENST00000399409 USP54Q70EL1 1684 aa28.7■■■□□ 2.19
RABGGTA-202ENST00000399409 FOXO3O43524 673 aa28.68■■■□□ 2.18
RABGGTA-202ENST00000399409 TTC22Q5TAA0 569 aa28.68■■■□□ 2.18
RABGGTA-202ENST00000399409 CEP170BQ9Y4F5 1589 aaPredicted RBP28.68■■■□□ 2.18
RABGGTA-202ENST00000399409 IL27Q8NEV9 243 aa28.68■■■□□ 2.18
RABGGTA-202ENST00000399409 KIF2CQ99661 725 aa28.68■■■□□ 2.18
RABGGTA-202ENST00000399409 CIZ1Q9ULV3 898 aaPredicted RBP28.68■■■□□ 2.18
RABGGTA-202ENST00000399409 DDIT3P35638 169 aa28.67■■■□□ 2.18
RABGGTA-202ENST00000399409 CCT4P50991 539 aaKnown RBP28.67■■■□□ 2.18
RABGGTA-202ENST00000399409 NLRP6P59044 892 aa28.67■■■□□ 2.18
RABGGTA-202ENST00000399409 GSPT1P15170 499 aaKnown RBP28.66■■■□□ 2.18
RABGGTA-202ENST00000399409 LRRC37A3O60309 1634 aa28.66■■■□□ 2.18
RABGGTA-202ENST00000399409 HMMRO75330 724 aa28.65■■■□□ 2.18
RABGGTA-202ENST00000399409 SOS1Q07889 1333 aaPredicted RBP28.65■■■□□ 2.18
RABGGTA-202ENST00000399409 HSP90AB1P08238 724 aaKnown RBP28.64■■■□□ 2.18
RABGGTA-202ENST00000399409 MEIS3Q99687 375 aa28.64■■■□□ 2.18
RABGGTA-202ENST00000399409 MIS18AQ9NYP9 233 aa28.64■■■□□ 2.18
RABGGTA-202ENST00000399409 BRPF3Q9ULD4 1205 aa28.63■■■□□ 2.17
RABGGTA-202ENST00000399409 HOXC9P31274 260 aa28.62■■■□□ 2.17
RABGGTA-202ENST00000399409 BABAM1Q9NWV8 329 aa28.62■■■□□ 2.17
RABGGTA-202ENST00000399409 GNAT3A8MTJ3 354 aa28.62■■■□□ 2.17
RABGGTA-202ENST00000399409 L1TD1Q5T7N2 865 aaKnown RBP28.62■■■□□ 2.17
RABGGTA-202ENST00000399409 STK31Q9BXU1 1019 aa28.62■■■□□ 2.17
RABGGTA-202ENST00000399409 MARF1Q9Y4F3 1742 aaKnown RBP28.61■■■□□ 2.17
RABGGTA-202ENST00000399409 KCNA6P17658 529 aa28.6■■■□□ 2.17
RABGGTA-202ENST00000399409 DDX11L8A8MPP1 907 aa28.6■■■□□ 2.17
RABGGTA-202ENST00000399409 PLPPR3Q6T4P5 718 aa28.6■■■□□ 2.17
RABGGTA-202ENST00000399409 NWD1Q149M9 1564 aa28.58■■■□□ 2.17
RABGGTA-202ENST00000399409 CCDC30Q5VVM6 783 aa28.58■■■□□ 2.17
RABGGTA-202ENST00000399409 G2E3Q7L622 706 aa28.58■■■□□ 2.17
RABGGTA-202ENST00000399409 C16orf71Q8IYS4 520 aaPredicted RBP28.58■■■□□ 2.17
RABGGTA-202ENST00000399409 K7ELQ4 463 aaPredicted RBP28.58■■■□□ 2.17
RABGGTA-202ENST00000399409 CASC1Q6TDU7 716 aa28.58■■■□□ 2.17
RABGGTA-202ENST00000399409 MAP3K5Q99683 1374 aa28.57■■■□□ 2.16
RABGGTA-202ENST00000399409 SLC4A10Q6U841 1118 aa28.55■■■□□ 2.16
RABGGTA-202ENST00000399409 ABTB2Q8N961 1025 aa28.55■■■□□ 2.16
RABGGTA-202ENST00000399409 GNAI2P04899 355 aa28.54■■■□□ 2.16
RABGGTA-202ENST00000399409 RABEP1Q15276 862 aa28.54■■■□□ 2.16
RABGGTA-202ENST00000399409 FAM208AQ9UK61 1670 aaKnown RBP28.54■■■□□ 2.16
RABGGTA-202ENST00000399409 TRAK2O60296 914 aa28.53■■■□□ 2.16
RABGGTA-202ENST00000399409 CACNA1FO60840 1977 aa28.52■■■□□ 2.16
RABGGTA-202ENST00000399409 F6X3S4 739 aa28.52■■■□□ 2.16
RABGGTA-202ENST00000399409 HSP90AA1P07900 732 aaKnown RBP28.52■■■□□ 2.16
RABGGTA-202ENST00000399409 GNAI3P08754 354 aa28.52■■■□□ 2.16
RABGGTA-202ENST00000399409 OSBPL3Q9H4L5 887 aa28.52■■■□□ 2.16
RABGGTA-202ENST00000399409 SDSP20132 328 aa28.52■■■□□ 2.16
RABGGTA-202ENST00000399409 FLIIQ13045 1269 aa28.52■■■□□ 2.16
RABGGTA-202ENST00000399409 RAB3GAP1Q15042 981 aa28.52■■■□□ 2.16
RABGGTA-202ENST00000399409 TAF7Q15545 349 aaPredicted RBP28.52■■■□□ 2.16
RABGGTA-202ENST00000399409 OTUD7AQ8TE49 926 aaPredicted RBP28.52■■■□□ 2.16
RABGGTA-202ENST00000399409 USP26Q9BXU7 913 aa28.52■■■□□ 2.16
RABGGTA-202ENST00000399409 SMARCA5O60264 1052 aaPredicted RBP28.51■■■□□ 2.15
RABGGTA-202ENST00000399409 PTMSP20962 102 aa28.51■■■□□ 2.15
RABGGTA-202ENST00000399409 GBP4Q96PP9 640 aa28.5■■■□□ 2.15
RABGGTA-202ENST00000399409 NUTM2GQ5VZR2 741 aa28.5■■■□□ 2.15
RABGGTA-202ENST00000399409 CD2BP2O95400 341 aaKnown RBP28.49■■■□□ 2.15
RABGGTA-202ENST00000399409 PHF8Q9UPP1 1060 aa28.49■■■□□ 2.15
RABGGTA-202ENST00000399409 IL17REQ8NFR9 667 aa28.49■■■□□ 2.15
RABGGTA-202ENST00000399409 TNPO1Q92973 898 aaKnown RBP28.48■■■□□ 2.15
RABGGTA-202ENST00000399409 DNAJC5Q9H3Z4 198 aa28.48■■■□□ 2.15
RABGGTA-202ENST00000399409 PXDNLA1KZ92 1463 aa28.48■■■□□ 2.15
RABGGTA-202ENST00000399409 RBM42Q9BTD8 480 aaKnown RBP28.48■■■□□ 2.15
RABGGTA-202ENST00000399409 FKBP5Q13451 457 aaPredicted RBP28.47■■■□□ 2.15
RABGGTA-202ENST00000399409 N4BP2Q86UW6 1770 aaPredicted RBP28.47■■■□□ 2.15
RABGGTA-202ENST00000399409 APBB1O00213 710 aa28.46■■■□□ 2.15
RABGGTA-202ENST00000399409 CHD2O14647 1828 aaKnown RBP28.46■■■□□ 2.15
RABGGTA-202ENST00000399409 REC8O95072 547 aa28.46■■■□□ 2.15
RABGGTA-202ENST00000399409 FSD2A1L4K1 749 aa28.45■■■□□ 2.15
RABGGTA-202ENST00000399409 GOLGA6L3A6NEY3 463 aa28.45■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms