RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 NCOA3Q9Y6Q9 1424 aa18.08■□□□□ 0.49
CCDC144A-205ENST00000399264 SLC4A10Q6U841 1118 aa18.08■□□□□ 0.48
CCDC144A-205ENST00000399264 GAS2L2Q8NHY3 880 aa18.08■□□□□ 0.48
CCDC144A-205ENST00000399264 AKAP12Q02952 1782 aa18.08■□□□□ 0.48
CCDC144A-205ENST00000399264 CEP85Q6P2H3 762 aa18.08■□□□□ 0.48
CCDC144A-205ENST00000399264 NECTIN2Q92692 538 aa18.08■□□□□ 0.48
CCDC144A-205ENST00000399264 CHMP4BQ9H444 224 aaKnown RBP18.08■□□□□ 0.48
CCDC144A-205ENST00000399264 SIRT1Q96EB6 747 aa18.07■□□□□ 0.48
CCDC144A-205ENST00000399264 ATP10DQ9P241 1426 aa18.07■□□□□ 0.48
CCDC144A-205ENST00000399264 PEAK1Q9H792 1746 aa18.07■□□□□ 0.48
CCDC144A-205ENST00000399264 HSP90AA1P07900 732 aaKnown RBP18.07■□□□□ 0.48
CCDC144A-205ENST00000399264 ITSN1Q15811 1721 aa18.06■□□□□ 0.48
CCDC144A-205ENST00000399264 CDC45O75419 566 aa18.06■□□□□ 0.48
CCDC144A-205ENST00000399264 HDGFP51858 240 aaKnown RBP18.06■□□□□ 0.48
CCDC144A-205ENST00000399264 ANKRD44Q8N8A2 993 aa18.06■□□□□ 0.48
CCDC144A-205ENST00000399264 RIMS1Q86UR5 1692 aaKnown RBP18.05■□□□□ 0.48
CCDC144A-205ENST00000399264 GOLGA6L3A6NEY3 463 aa18.05■□□□□ 0.48
CCDC144A-205ENST00000399264 AK9Q5TCS8 1911 aa18.05■□□□□ 0.48
CCDC144A-205ENST00000399264 OVOS2A0A0J9YW53 1432 aa18.05■□□□□ 0.48
CCDC144A-205ENST00000399264 OVOS2Q6IE36 1432 aa18.05■□□□□ 0.48
CCDC144A-205ENST00000399264 PTPRUQ92729 1446 aa18.05■□□□□ 0.48
CCDC144A-205ENST00000399264 PLEKHG3A1L390 1219 aa18.05■□□□□ 0.48
CCDC144A-205ENST00000399264 FSD2A1L4K1 749 aa18.05■□□□□ 0.48
CCDC144A-205ENST00000399264 TTC22Q5TAA0 569 aa18.05■□□□□ 0.48
CCDC144A-205ENST00000399264 TSHZ3Q63HK5 1081 aa18.05■□□□□ 0.48
CCDC144A-205ENST00000399264 RRAGDQ9NQL2 400 aaPredicted RBP18.05■□□□□ 0.48
CCDC144A-205ENST00000399264 USP6P35125 1406 aa18.04■□□□□ 0.48
CCDC144A-205ENST00000399264 RTL1A6NKG5 1358 aa18.04■□□□□ 0.48
CCDC144A-205ENST00000399264 SSFA2P28290 1259 aa18.04■□□□□ 0.48
CCDC144A-205ENST00000399264 K7ELQ4 463 aaPredicted RBP18.03■□□□□ 0.48
CCDC144A-205ENST00000399264 SDSP20132 328 aa18.03■□□□□ 0.48
CCDC144A-205ENST00000399264 CRB1P82279 1406 aa18.03■□□□□ 0.48
CCDC144A-205ENST00000399264 AMOTL2Q9Y2J4 779 aa18.03■□□□□ 0.48
CCDC144A-205ENST00000399264 EYA1Q99502 592 aa18.03■□□□□ 0.48
CCDC144A-205ENST00000399264 TSPYL4Q9UJ04 414 aa18.03■□□□□ 0.48
CCDC144A-205ENST00000399264 RAB3GAP1Q15042 981 aa18.02■□□□□ 0.47
CCDC144A-205ENST00000399264 L1TD1Q5T7N2 865 aaKnown RBP18.02■□□□□ 0.47
CCDC144A-205ENST00000399264 NGDNQ8NEJ9 315 aaKnown RBP18.01■□□□□ 0.47
CCDC144A-205ENST00000399264 UBR1Q8IWV7 1749 aa18■□□□□ 0.47
CCDC144A-205ENST00000399264 GAS2L3Q86XJ1 694 aa18■□□□□ 0.47
CCDC144A-205ENST00000399264 LTV1Q96GA3 475 aaPredicted RBP18■□□□□ 0.47
CCDC144A-205ENST00000399264 USP26Q9BXU7 913 aa18■□□□□ 0.47
CCDC144A-205ENST00000399264 NRKQ7Z2Y5 1582 aa18■□□□□ 0.47
CCDC144A-205ENST00000399264 RPAP2Q8IXW5 612 aaPredicted RBP17.99■□□□□ 0.47
CCDC144A-205ENST00000399264 EXOC6BQ9Y2D4 811 aa17.99■□□□□ 0.47
CCDC144A-205ENST00000399264 AMPHP49418 695 aa17.99■□□□□ 0.47
CCDC144A-205ENST00000399264 PKP1Q13835 747 aa17.99■□□□□ 0.47
CCDC144A-205ENST00000399264 FAM43AQ8N2R8 423 aa17.99■□□□□ 0.47
CCDC144A-205ENST00000399264 RTF1Q92541 710 aaKnown RBP17.99■□□□□ 0.47
CCDC144A-205ENST00000399264 DDX11L8A8MPP1 907 aa17.98■□□□□ 0.47
CCDC144A-205ENST00000399264 KIAA0232Q92628 1395 aa17.98■□□□□ 0.47
CCDC144A-205ENST00000399264 RBM33Q96EV2 1170 aaKnown RBP17.98■□□□□ 0.47
CCDC144A-205ENST00000399264 USP31Q70CQ4 1352 aa17.97■□□□□ 0.47
CCDC144A-205ENST00000399264 CEP170BQ9Y4F5 1589 aaPredicted RBP17.97■□□□□ 0.47
CCDC144A-205ENST00000399264 CHAMP1Q96JM3 812 aa17.97■□□□□ 0.47
CCDC144A-205ENST00000399264 KIF24Q5T7B8 1368 aa17.97■□□□□ 0.47
CCDC144A-205ENST00000399264 SSH2Q76I76 1423 aa17.97■□□□□ 0.47
CCDC144A-205ENST00000399264 RGPD8O14715 1765 aaPredicted RBP17.96■□□□□ 0.47
CCDC144A-205ENST00000399264 NLRP6P59044 892 aa17.96■□□□□ 0.47
CCDC144A-205ENST00000399264 USHBP1Q8N6Y0 703 aa17.96■□□□□ 0.47
CCDC144A-205ENST00000399264 PTPRCP08575 1304 aa17.96■□□□□ 0.47
CCDC144A-205ENST00000399264 PLEKHG1Q9ULL1 1385 aa17.95■□□□□ 0.46
CCDC144A-205ENST00000399264 CIZ1Q9ULV3 898 aaPredicted RBP17.94■□□□□ 0.46
CCDC144A-205ENST00000399264 KIF13AQ9H1H9 1805 aa17.94■□□□□ 0.46
CCDC144A-205ENST00000399264 RGPD1P0DJD0 1748 aa17.94■□□□□ 0.46
CCDC144A-205ENST00000399264 PNMA6EA0A0J9YXQ4 647 aa17.94■□□□□ 0.46
CCDC144A-205ENST00000399264 ZGPATQ8N5A5 531 aaKnown RBP17.94■□□□□ 0.46
CCDC144A-205ENST00000399264 GRPEL1Q9HAV7 217 aa17.94■□□□□ 0.46
CCDC144A-205ENST00000399264 PLEKHG5O94827 1062 aa17.94■□□□□ 0.46
CCDC144A-205ENST00000399264 GBP4Q96PP9 640 aa17.93■□□□□ 0.46
CCDC144A-205ENST00000399264 TOPAZ1Q8N9V7 1692 aa17.93■□□□□ 0.46
CCDC144A-205ENST00000399264 FKBP5Q13451 457 aaPredicted RBP17.93■□□□□ 0.46
CCDC144A-205ENST00000399264 FLT4P35916 1363 aa17.92■□□□□ 0.46
CCDC144A-205ENST00000399264 PDE1AP54750 535 aa17.92■□□□□ 0.46
CCDC144A-205ENST00000399264 IL17REQ8NFR9 667 aa17.92■□□□□ 0.46
CCDC144A-205ENST00000399264 EID1Q9Y6B2 187 aa17.92■□□□□ 0.46
CCDC144A-205ENST00000399264 FLIIQ13045 1269 aa17.91■□□□□ 0.46
CCDC144A-205ENST00000399264 ARHGEF10O15013 1369 aa17.91■□□□□ 0.46
CCDC144A-205ENST00000399264 IGSF1Q8N6C5 1336 aa17.91■□□□□ 0.46
CCDC144A-205ENST00000399264 HAP1P54257 671 aaPredicted RBP17.91■□□□□ 0.46
CCDC144A-205ENST00000399264 RABEP1Q15276 862 aa17.91■□□□□ 0.46
CCDC144A-205ENST00000399264 SBNO1A3KN83 1393 aa17.91■□□□□ 0.46
CCDC144A-205ENST00000399264 NALCNQ8IZF0 1738 aa17.91■□□□□ 0.46
CCDC144A-205ENST00000399264 EIF5BO60841 1220 aaKnown RBP17.9■□□□□ 0.46
CCDC144A-205ENST00000399264 BAG4O95429 457 aaKnown RBP17.9■□□□□ 0.46
CCDC144A-205ENST00000399264 C14orf37Q86TY3 774 aa17.9■□□□□ 0.46
CCDC144A-205ENST00000399264 SETD1BQ9UPS6 1966 aaKnown RBP17.9■□□□□ 0.46
CCDC144A-205ENST00000399264 KDRP35968 1356 aa17.9■□□□□ 0.46
CCDC144A-205ENST00000399264 KCNA6P17658 529 aa17.9■□□□□ 0.46
CCDC144A-205ENST00000399264 MRE11P49959 708 aa17.9■□□□□ 0.46
CCDC144A-205ENST00000399264 FOXD4L5Q5VV16 416 aaPredicted RBP17.9■□□□□ 0.46
CCDC144A-205ENST00000399264 FOXD4L4Q8WXT5 416 aaPredicted RBP17.9■□□□□ 0.46
CCDC144A-205ENST00000399264 STK31Q9BXU1 1019 aa17.89■□□□□ 0.45
CCDC144A-205ENST00000399264 GNAI2P04899 355 aa17.89■□□□□ 0.45
CCDC144A-205ENST00000399264 HOXC9P31274 260 aa17.89■□□□□ 0.45
CCDC144A-205ENST00000399264 PHAXQ9H814 394 aaKnown RBP17.89■□□□□ 0.45
CCDC144A-205ENST00000399264 CCT4P50991 539 aaKnown RBP17.88■□□□□ 0.45
CCDC144A-205ENST00000399264 TTC21AQ8NDW8 1320 aa17.88■□□□□ 0.45
CCDC144A-205ENST00000399264 MCTP1Q6DN14 999 aa17.88■□□□□ 0.45
CCDC144A-205ENST00000399264 ABTB2Q8N961 1025 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms