RNA–Protein interactions for RNA: ENST00000399003.1

AP002358.1-201, humanhuman

TSL 2 BASIC

Gene AP002358.1, Length 2,805 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002358.1-201ENST00000399003 PHACTR3Q96KR7 559 aa10.48□□□□□ -0.73
AP002358.1-201ENST00000399003 ANKRD45Q5TZF3 282 aa10.48□□□□□ -0.73
AP002358.1-201ENST00000399003 INTS3Q68E01 1043 aaKnown RBP10.48□□□□□ -0.73
AP002358.1-201ENST00000399003 DCTPP1Q9H773 170 aa10.47□□□□□ -0.73
AP002358.1-201ENST00000399003 PEAK1Q9H792 1746 aa10.47□□□□□ -0.73
AP002358.1-201ENST00000399003 TWISTNBQ3B726 338 aaPredicted RBP10.47□□□□□ -0.73
AP002358.1-201ENST00000399003 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.47□□□□□ -0.73
AP002358.1-201ENST00000399003 MTERF4Q7Z6M4 381 aaKnown RBP10.47□□□□□ -0.73
AP002358.1-201ENST00000399003 SPRYD3Q8NCJ5 442 aa10.47□□□□□ -0.73
AP002358.1-201ENST00000399003 RABEP1Q15276 862 aa10.46□□□□□ -0.73
AP002358.1-201ENST00000399003 TSPYL6Q8N831 410 aa10.46□□□□□ -0.73
AP002358.1-201ENST00000399003 USP54Q70EL1 1684 aa10.46□□□□□ -0.73
AP002358.1-201ENST00000399003 FAM208AQ9UK61 1670 aaKnown RBP10.46□□□□□ -0.73
AP002358.1-201ENST00000399003 WASLO00401 505 aaPredicted RBP10.46□□□□□ -0.74
AP002358.1-201ENST00000399003 OVOS2A0A0J9YW53 1432 aa10.45□□□□□ -0.74
AP002358.1-201ENST00000399003 OVOS2Q6IE36 1432 aa10.45□□□□□ -0.74
AP002358.1-201ENST00000399003 UBR1Q8IWV7 1749 aa10.45□□□□□ -0.74
AP002358.1-201ENST00000399003 TSPOAP1O95153 1857 aa10.45□□□□□ -0.74
AP002358.1-201ENST00000399003 TTC22Q5TAA0 569 aa10.45□□□□□ -0.74
AP002358.1-201ENST00000399003 ZSCAN30Q86W11 494 aa10.45□□□□□ -0.74
AP002358.1-201ENST00000399003 PLEKHM2Q8IWE5 1019 aa10.45□□□□□ -0.74
AP002358.1-201ENST00000399003 ANKRD44Q8N8A2 993 aa10.45□□□□□ -0.74
AP002358.1-201ENST00000399003 CD2BP2O95400 341 aaKnown RBP10.44□□□□□ -0.74
AP002358.1-201ENST00000399003 GSPT1P15170 499 aaKnown RBP10.44□□□□□ -0.74
AP002358.1-201ENST00000399003 XRN1Q8IZH2 1706 aaKnown RBP10.44□□□□□ -0.74
AP002358.1-201ENST00000399003 PTPRCP08575 1304 aa10.44□□□□□ -0.74
AP002358.1-201ENST00000399003 CYP2E1P05181 493 aaPredicted RBP10.44□□□□□ -0.74
AP002358.1-201ENST00000399003 FAM69CQ0P6D2 419 aa10.44□□□□□ -0.74
AP002358.1-201ENST00000399003 KLHL40Q2TBA0 621 aa10.44□□□□□ -0.74
AP002358.1-201ENST00000399003 UTP14CQ5TAP6 766 aaKnown RBP10.44□□□□□ -0.74
AP002358.1-201ENST00000399003 RPAP2Q8IXW5 612 aaPredicted RBP10.44□□□□□ -0.74
AP002358.1-201ENST00000399003 PPP1R9BQ96SB3 815 aa10.44□□□□□ -0.74
AP002358.1-201ENST00000399003 EMILIN1Q9Y6C2 1016 aa10.44□□□□□ -0.74
AP002358.1-201ENST00000399003 AK9Q5TCS8 1911 aa10.44□□□□□ -0.74
AP002358.1-201ENST00000399003 CCDC173Q0VFZ6 552 aa10.43□□□□□ -0.74
AP002358.1-201ENST00000399003 ARHGEF10O15013 1369 aa10.43□□□□□ -0.74
AP002358.1-201ENST00000399003 C8orf58Q8NAV2 365 aa10.43□□□□□ -0.74
AP002358.1-201ENST00000399003 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.43□□□□□ -0.74
AP002358.1-201ENST00000399003 FAM13BQ9NYF5 915 aa10.43□□□□□ -0.74
AP002358.1-201ENST00000399003 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.43□□□□□ -0.74
AP002358.1-201ENST00000399003 GOLGA6L22H0YM25 854 aa10.43□□□□□ -0.74
AP002358.1-201ENST00000399003 HMOX1P09601 288 aa10.43□□□□□ -0.74
AP002358.1-201ENST00000399003 NCLP19338 710 aaKnown RBP10.43□□□□□ -0.74
AP002358.1-201ENST00000399003 FBXO31Q5XUX0 539 aaPredicted RBP10.43□□□□□ -0.74
AP002358.1-201ENST00000399003 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.43□□□□□ -0.74
AP002358.1-201ENST00000399003 RTL1A6NKG5 1358 aa10.42□□□□□ -0.74
AP002358.1-201ENST00000399003 NUCB2P80303 420 aa10.42□□□□□ -0.74
AP002358.1-201ENST00000399003 GAS2L2Q8NHY3 880 aa10.42□□□□□ -0.74
AP002358.1-201ENST00000399003 COG3Q96JB2 828 aa10.42□□□□□ -0.74
AP002358.1-201ENST00000399003 C1orf115Q9H7X2 142 aa10.42□□□□□ -0.74
AP002358.1-201ENST00000399003 GAS2L3Q86XJ1 694 aa10.42□□□□□ -0.74
AP002358.1-201ENST00000399003 THUMPD2Q9BTF0 503 aaKnown RBP10.42□□□□□ -0.74
AP002358.1-201ENST00000399003 USP26Q9BXU7 913 aa10.42□□□□□ -0.74
AP002358.1-201ENST00000399003 CWC22Q9HCG8 908 aaKnown RBP10.42□□□□□ -0.74
AP002358.1-201ENST00000399003 USP31Q70CQ4 1352 aa10.42□□□□□ -0.74
AP002358.1-201ENST00000399003 CRB1P82279 1406 aa10.41□□□□□ -0.74
AP002358.1-201ENST00000399003 CHL1O00533 1208 aa10.41□□□□□ -0.74
AP002358.1-201ENST00000399003 ZNF445P59923 1031 aa10.41□□□□□ -0.74
AP002358.1-201ENST00000399003 NME9Q86XW9 330 aa10.41□□□□□ -0.74
AP002358.1-201ENST00000399003 METP08581 1390 aa10.41□□□□□ -0.74
AP002358.1-201ENST00000399003 BAG4O95429 457 aaKnown RBP10.41□□□□□ -0.74
AP002358.1-201ENST00000399003 WAPLQ7Z5K2 1190 aa10.41□□□□□ -0.74
AP002358.1-201ENST00000399003 OSBPL3Q9H4L5 887 aa10.41□□□□□ -0.74
AP002358.1-201ENST00000399003 CCDC61Q9Y6R9 512 aa10.41□□□□□ -0.74
AP002358.1-201ENST00000399003 MSNP26038 577 aaKnown RBP10.4□□□□□ -0.74
AP002358.1-201ENST00000399003 DMTNQ08495 405 aa10.4□□□□□ -0.74
AP002358.1-201ENST00000399003 CEP85Q6P2H3 762 aa10.4□□□□□ -0.74
AP002358.1-201ENST00000399003 MSH6P52701 1360 aa10.4□□□□□ -0.74
AP002358.1-201ENST00000399003 NUDT16Q96DE0 195 aaKnown RBP10.4□□□□□ -0.74
AP002358.1-201ENST00000399003 IL17RAQ96F46 866 aa10.4□□□□□ -0.74
AP002358.1-201ENST00000399003 SSH2Q76I76 1423 aa10.4□□□□□ -0.74
AP002358.1-201ENST00000399003 SSFA2P28290 1259 aa10.39□□□□□ -0.75
AP002358.1-201ENST00000399003 PXDNLA1KZ92 1463 aa10.39□□□□□ -0.75
AP002358.1-201ENST00000399003 TTC21BQ7Z4L5 1316 aa10.39□□□□□ -0.75
AP002358.1-201ENST00000399003 DYNC1I1O14576 645 aa10.39□□□□□ -0.75
AP002358.1-201ENST00000399003 HS1BP3Q53T59 392 aa10.39□□□□□ -0.75
AP002358.1-201ENST00000399003 CASC1Q6TDU7 716 aa10.39□□□□□ -0.75
AP002358.1-201ENST00000399003 STAG3Q9UJ98 1225 aa10.39□□□□□ -0.75
AP002358.1-201ENST00000399003 ZHX1Q9UKY1 873 aaPredicted RBP10.39□□□□□ -0.75
AP002358.1-201ENST00000399003 CRYBG1Q9Y4K1 1723 aa10.38□□□□□ -0.75
AP002358.1-201ENST00000399003 RBM42Q9BTD8 480 aaKnown RBP10.38□□□□□ -0.75
AP002358.1-201ENST00000399003 R3HCC1Q9Y3T6 440 aaKnown RBP10.38□□□□□ -0.75
AP002358.1-201ENST00000399003 USP6P35125 1406 aa10.38□□□□□ -0.75
AP002358.1-201ENST00000399003 MARF1Q9Y4F3 1742 aaKnown RBP10.38□□□□□ -0.75
AP002358.1-201ENST00000399003 REC8O95072 547 aa10.38□□□□□ -0.75
AP002358.1-201ENST00000399003 FBLN1P23142 703 aa10.38□□□□□ -0.75
AP002358.1-201ENST00000399003 BBXQ8WY36 941 aaPredicted RBP10.38□□□□□ -0.75
AP002358.1-201ENST00000399003 KDRP35968 1356 aa10.37□□□□□ -0.75
AP002358.1-201ENST00000399003 ZNF500O60304 480 aaPredicted RBP10.37□□□□□ -0.75
AP002358.1-201ENST00000399003 ANP32BQ92688 251 aaKnown RBP10.37□□□□□ -0.75
AP002358.1-201ENST00000399003 EIF4A2Q14240 407 aaKnown RBP10.37□□□□□ -0.75
AP002358.1-201ENST00000399003 SOS1Q07889 1333 aaPredicted RBP10.37□□□□□ -0.75
AP002358.1-201ENST00000399003 UQCRHLA0A096LP55 91 aa10.36□□□□□ -0.75
AP002358.1-201ENST00000399003 EPB41L2O43491 1005 aaKnown RBP10.36□□□□□ -0.75
AP002358.1-201ENST00000399003 ST18O60284 1047 aa10.36□□□□□ -0.75
AP002358.1-201ENST00000399003 UQCRHP07919 91 aa10.36□□□□□ -0.75
AP002358.1-201ENST00000399003 PDIA4P13667 645 aaKnown RBP10.36□□□□□ -0.75
AP002358.1-201ENST00000399003 SDSP20132 328 aa10.36□□□□□ -0.75
AP002358.1-201ENST00000399003 TPRNQ4KMQ1 711 aa10.36□□□□□ -0.75
AP002358.1-201ENST00000399003 SALL3Q9BXA9 1300 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms