RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 RGPD1P0DJD0 1748 aa22.96■■□□□ 1.27
CHRFAM7A-202ENST00000397827 MTHFSDQ2M296 383 aaKnown RBP22.96■■□□□ 1.27
CHRFAM7A-202ENST00000397827 AMPHP49418 695 aa22.95■■□□□ 1.26
CHRFAM7A-202ENST00000397827 NUTM2GQ5VZR2 741 aa22.95■■□□□ 1.26
CHRFAM7A-202ENST00000397827 PLEKHG5O94827 1062 aa22.95■■□□□ 1.26
CHRFAM7A-202ENST00000397827 BMP2KLQ5H9B9 411 aa22.95■■□□□ 1.26
CHRFAM7A-202ENST00000397827 DIP2AQ14689 1571 aa22.95■■□□□ 1.26
CHRFAM7A-202ENST00000397827 RIMS1Q86UR5 1692 aaKnown RBP22.94■■□□□ 1.26
CHRFAM7A-202ENST00000397827 FLT4P35916 1363 aa22.93■■□□□ 1.26
CHRFAM7A-202ENST00000397827 KCNA6P17658 529 aa22.93■■□□□ 1.26
CHRFAM7A-202ENST00000397827 EYA1Q99502 592 aa22.93■■□□□ 1.26
CHRFAM7A-202ENST00000397827 CRB1P82279 1406 aa22.92■■□□□ 1.26
CHRFAM7A-202ENST00000397827 NLRP6P59044 892 aa22.92■■□□□ 1.26
CHRFAM7A-202ENST00000397827 INTS3Q68E01 1043 aaKnown RBP22.92■■□□□ 1.26
CHRFAM7A-202ENST00000397827 SBNO1A3KN83 1393 aa22.92■■□□□ 1.26
CHRFAM7A-202ENST00000397827 ARHGEF10O15013 1369 aa22.92■■□□□ 1.26
CHRFAM7A-202ENST00000397827 FAM43AQ8N2R8 423 aa22.92■■□□□ 1.26
CHRFAM7A-202ENST00000397827 RGS12O14924 1447 aa22.91■■□□□ 1.26
CHRFAM7A-202ENST00000397827 RTF1Q92541 710 aaKnown RBP22.91■■□□□ 1.26
CHRFAM7A-202ENST00000397827 KIAA0232Q92628 1395 aa22.91■■□□□ 1.26
CHRFAM7A-202ENST00000397827 FER1L4A9Z1Z3 1794 aa22.91■■□□□ 1.26
CHRFAM7A-202ENST00000397827 SLC4A2P04920 1241 aa22.9■■□□□ 1.26
CHRFAM7A-202ENST00000397827 HAP1P54257 671 aaPredicted RBP22.9■■□□□ 1.26
CHRFAM7A-202ENST00000397827 PODXL2Q9NZ53 605 aa22.89■■□□□ 1.26
CHRFAM7A-202ENST00000397827 TSPYL4Q9UJ04 414 aa22.89■■□□□ 1.26
CHRFAM7A-202ENST00000397827 FMN2Q9NZ56 1722 aa22.89■■□□□ 1.26
CHRFAM7A-202ENST00000397827 CEP170BQ9Y4F5 1589 aaPredicted RBP22.89■■□□□ 1.25
CHRFAM7A-202ENST00000397827 PIK3C2AO00443 1686 aa22.88■■□□□ 1.25
CHRFAM7A-202ENST00000397827 MSH6P52701 1360 aa22.88■■□□□ 1.25
CHRFAM7A-202ENST00000397827 KIF24Q5T7B8 1368 aa22.88■■□□□ 1.25
CHRFAM7A-202ENST00000397827 RBM25P49756 843 aaKnown RBP22.87■■□□□ 1.25
CHRFAM7A-202ENST00000397827 IGSF1Q8N6C5 1336 aa22.87■■□□□ 1.25
CHRFAM7A-202ENST00000397827 TBC1D9Q6ZT07 1266 aa22.87■■□□□ 1.25
CHRFAM7A-202ENST00000397827 DCTPP1Q9H773 170 aa22.87■■□□□ 1.25
CHRFAM7A-202ENST00000397827 KDRP35968 1356 aa22.87■■□□□ 1.25
CHRFAM7A-202ENST00000397827 MEIS3Q99687 375 aa22.86■■□□□ 1.25
CHRFAM7A-202ENST00000397827 G2E3Q7L622 706 aa22.86■■□□□ 1.25
CHRFAM7A-202ENST00000397827 C16orf71Q8IYS4 520 aaPredicted RBP22.85■■□□□ 1.25
CHRFAM7A-202ENST00000397827 RBM33Q96EV2 1170 aaKnown RBP22.85■■□□□ 1.25
CHRFAM7A-202ENST00000397827 PTPRCP08575 1304 aa22.85■■□□□ 1.25
CHRFAM7A-202ENST00000397827 ATP10DQ9P241 1426 aa22.84■■□□□ 1.25
CHRFAM7A-202ENST00000397827 HSCBQ8IWL3 235 aa22.84■■□□□ 1.25
CHRFAM7A-202ENST00000397827 ANKRD44Q8N8A2 993 aa22.84■■□□□ 1.25
CHRFAM7A-202ENST00000397827 LTV1Q96GA3 475 aaPredicted RBP22.84■■□□□ 1.25
CHRFAM7A-202ENST00000397827 CEP85Q6P2H3 762 aa22.84■■□□□ 1.25
CHRFAM7A-202ENST00000397827 ABTB2Q8N961 1025 aa22.84■■□□□ 1.25
CHRFAM7A-202ENST00000397827 F6X3S4 739 aa22.84■■□□□ 1.25
CHRFAM7A-202ENST00000397827 APBB1O00213 710 aa22.84■■□□□ 1.25
CHRFAM7A-202ENST00000397827 GSPT1P15170 499 aaKnown RBP22.84■■□□□ 1.25
CHRFAM7A-202ENST00000397827 PLEKHM2Q8IWE5 1019 aa22.84■■□□□ 1.25
CHRFAM7A-202ENST00000397827 XRN1Q8IZH2 1706 aaKnown RBP22.83■■□□□ 1.25
CHRFAM7A-202ENST00000397827 HOXC9P31274 260 aa22.83■■□□□ 1.25
CHRFAM7A-202ENST00000397827 SLC4A10Q6U841 1118 aa22.83■■□□□ 1.25
CHRFAM7A-202ENST00000397827 C14orf37Q86TY3 774 aa22.83■■□□□ 1.25
CHRFAM7A-202ENST00000397827 GAS2L2Q8NHY3 880 aa22.83■■□□□ 1.25
CHRFAM7A-202ENST00000397827 RTL1A6NKG5 1358 aa22.82■■□□□ 1.24
CHRFAM7A-202ENST00000397827 RPAP2Q8IXW5 612 aaPredicted RBP22.81■■□□□ 1.24
CHRFAM7A-202ENST00000397827 OTUD7AQ8TE49 926 aaPredicted RBP22.81■■□□□ 1.24
CHRFAM7A-202ENST00000397827 KIF2CQ99661 725 aa22.8■■□□□ 1.24
CHRFAM7A-202ENST00000397827 SMARCA5O60264 1052 aaPredicted RBP22.8■■□□□ 1.24
CHRFAM7A-202ENST00000397827 NECTIN2Q92692 538 aa22.79■■□□□ 1.24
CHRFAM7A-202ENST00000397827 ANKARQ7Z5J8 1434 aa22.79■■□□□ 1.24
CHRFAM7A-202ENST00000397827 CHMP5Q9NZZ3 219 aa22.78■■□□□ 1.24
CHRFAM7A-202ENST00000397827 GNAT3A8MTJ3 354 aa22.78■■□□□ 1.24
CHRFAM7A-202ENST00000397827 CDC45O75419 566 aa22.78■■□□□ 1.24
CHRFAM7A-202ENST00000397827 TRHP20396 242 aaPredicted RBP22.78■■□□□ 1.24
CHRFAM7A-202ENST00000397827 USHBP1Q8N6Y0 703 aa22.78■■□□□ 1.24
CHRFAM7A-202ENST00000397827 RBM42Q9BTD8 480 aaKnown RBP22.76■■□□□ 1.23
CHRFAM7A-202ENST00000397827 TTC22Q5TAA0 569 aa22.76■■□□□ 1.23
CHRFAM7A-202ENST00000397827 CD2BP2O95400 341 aaKnown RBP22.75■■□□□ 1.23
CHRFAM7A-202ENST00000397827 SNX21Q969T3 373 aa22.75■■□□□ 1.23
CHRFAM7A-202ENST00000397827 MARF1Q9Y4F3 1742 aaKnown RBP22.75■■□□□ 1.23
CHRFAM7A-202ENST00000397827 IL17REQ8NFR9 667 aa22.75■■□□□ 1.23
CHRFAM7A-202ENST00000397827 STK31Q9BXU1 1019 aa22.74■■□□□ 1.23
CHRFAM7A-202ENST00000397827 PHF8Q9UPP1 1060 aa22.73■■□□□ 1.23
CHRFAM7A-202ENST00000397827 MCM4P33991 863 aa22.73■■□□□ 1.23
CHRFAM7A-202ENST00000397827 NWD1Q149M9 1564 aa22.73■■□□□ 1.23
CHRFAM7A-202ENST00000397827 HTATSF1O43719 755 aaKnown RBP22.72■■□□□ 1.23
CHRFAM7A-202ENST00000397827 HSP90AB1P08238 724 aaKnown RBP22.72■■□□□ 1.23
CHRFAM7A-202ENST00000397827 CCT4P50991 539 aaKnown RBP22.72■■□□□ 1.23
CHRFAM7A-202ENST00000397827 FKBP5Q13451 457 aaPredicted RBP22.72■■□□□ 1.23
CHRFAM7A-202ENST00000397827 FLIIQ13045 1269 aa22.71■■□□□ 1.23
CHRFAM7A-202ENST00000397827 FOXD4L1Q9NU39 408 aa22.71■■□□□ 1.23
CHRFAM7A-202ENST00000397827 NCOA3Q9Y6Q9 1424 aa22.7■■□□□ 1.23
CHRFAM7A-202ENST00000397827 MAP3K5Q99683 1374 aa22.7■■□□□ 1.23
CHRFAM7A-202ENST00000397827 ZBTB7CA1YPR0 619 aa22.7■■□□□ 1.22
CHRFAM7A-202ENST00000397827 SETD1BQ9UPS6 1966 aaKnown RBP22.7■■□□□ 1.22
CHRFAM7A-202ENST00000397827 CCDC30Q5VVM6 783 aa22.7■■□□□ 1.22
CHRFAM7A-202ENST00000397827 SDSP20132 328 aa22.69■■□□□ 1.22
CHRFAM7A-202ENST00000397827 DDIT3P35638 169 aa22.69■■□□□ 1.22
CHRFAM7A-202ENST00000397827 ANKLE2Q86XL3 938 aa22.69■■□□□ 1.22
CHRFAM7A-202ENST00000397827 HMMRO75330 724 aa22.68■■□□□ 1.22
CHRFAM7A-202ENST00000397827 TAF7Q15545 349 aaPredicted RBP22.68■■□□□ 1.22
CHRFAM7A-202ENST00000397827 ESCO1Q5FWF5 840 aa22.67■■□□□ 1.22
CHRFAM7A-202ENST00000397827 LRRC37A3O60309 1634 aa22.67■■□□□ 1.22
CHRFAM7A-202ENST00000397827 GNAI2P04899 355 aa22.67■■□□□ 1.22
CHRFAM7A-202ENST00000397827 EXOC6BQ9Y2D4 811 aa22.67■■□□□ 1.22
CHRFAM7A-202ENST00000397827 HSP90AA2PQ14568 343 aaPredicted RBP22.67■■□□□ 1.22
CHRFAM7A-202ENST00000397827 HSP90AA1P07900 732 aaKnown RBP22.66■■□□□ 1.22
CHRFAM7A-202ENST00000397827 RRAGDQ9NQL2 400 aaPredicted RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms