RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 HOXB7P09629 217 aa6.65□□□□□ -1.34
PTPRD-205ENST00000397611 KDRP35968 1356 aa6.65□□□□□ -1.34
PTPRD-205ENST00000397611 FOXD4L6Q3SYB3 417 aaPredicted RBP6.65□□□□□ -1.35
PTPRD-205ENST00000397611 FOXD4L3Q6VB84 417 aaPredicted RBP6.65□□□□□ -1.35
PTPRD-205ENST00000397611 PPP1R9BQ96SB3 815 aa6.65□□□□□ -1.35
PTPRD-205ENST00000397611 BCL11BQ9C0K0 894 aaPredicted RBP6.65□□□□□ -1.35
PTPRD-205ENST00000397611 GNAI3P08754 354 aa6.65□□□□□ -1.35
PTPRD-205ENST00000397611 MAPK8IP2Q13387 824 aaPredicted RBP6.65□□□□□ -1.35
PTPRD-205ENST00000397611 FAM184AQ8NB25 1140 aa6.65□□□□□ -1.35
PTPRD-205ENST00000397611 COG3Q96JB2 828 aa6.65□□□□□ -1.35
PTPRD-205ENST00000397611 CABP2Q9NPB3 220 aa6.65□□□□□ -1.35
PTPRD-205ENST00000397611 PTPRUQ92729 1446 aa6.65□□□□□ -1.35
PTPRD-205ENST00000397611 ST18O60284 1047 aa6.65□□□□□ -1.35
PTPRD-205ENST00000397611 A2ML1A8K2U0 1454 aa6.64□□□□□ -1.35
PTPRD-205ENST00000397611 TRHP20396 242 aaPredicted RBP6.64□□□□□ -1.35
PTPRD-205ENST00000397611 SKAP1Q86WV1 359 aa6.64□□□□□ -1.35
PTPRD-205ENST00000397611 TICAM2Q86XR7 235 aa6.64□□□□□ -1.35
PTPRD-205ENST00000397611 TSR2Q969E8 191 aaKnown RBP6.64□□□□□ -1.35
PTPRD-205ENST00000397611 SRCIN1Q9C0H9 1055 aa6.64□□□□□ -1.35
PTPRD-205ENST00000397611 NOB1Q9ULX3 412 aaKnown RBP6.64□□□□□ -1.35
PTPRD-205ENST00000397611 CYP2E1P05181 493 aaPredicted RBP6.64□□□□□ -1.35
PTPRD-205ENST00000397611 CAMSAP1Q5T5Y3 1602 aa6.64□□□□□ -1.35
PTPRD-205ENST00000397611 ZNF592Q92610 1267 aa6.64□□□□□ -1.35
PTPRD-205ENST00000397611 BCL2L13Q9BXK5 485 aa6.64□□□□□ -1.35
PTPRD-205ENST00000397611 CABP1Q9NZU7 370 aa6.64□□□□□ -1.35
PTPRD-205ENST00000397611 CCT4P50991 539 aaKnown RBP6.64□□□□□ -1.35
PTPRD-205ENST00000397611 GRPEL1Q9HAV7 217 aa6.64□□□□□ -1.35
PTPRD-205ENST00000397611 UQCRHLA0A096LP55 91 aa6.64□□□□□ -1.35
PTPRD-205ENST00000397611 UQCRHP07919 91 aa6.64□□□□□ -1.35
PTPRD-205ENST00000397611 CDK19Q9BWU1 502 aa6.64□□□□□ -1.35
PTPRD-205ENST00000397611 AEBP2Q6ZN18 517 aaPredicted RBP6.63□□□□□ -1.35
PTPRD-205ENST00000397611 MTERF4Q7Z6M4 381 aaKnown RBP6.63□□□□□ -1.35
PTPRD-205ENST00000397611 PDLIM2Q96JY6 352 aa6.63□□□□□ -1.35
PTPRD-205ENST00000397611 CCDC173Q0VFZ6 552 aa6.63□□□□□ -1.35
PTPRD-205ENST00000397611 PLEKHG2Q9H7P9 1386 aa6.63□□□□□ -1.35
PTPRD-205ENST00000397611 MINK1Q8N4C8 1332 aaPredicted RBP6.63□□□□□ -1.35
PTPRD-205ENST00000397611 KCNJ4P48050 445 aa6.63□□□□□ -1.35
PTPRD-205ENST00000397611 MCTP1Q6DN14 999 aa6.63□□□□□ -1.35
PTPRD-205ENST00000397611 CCDC39Q9UFE4 941 aa6.63□□□□□ -1.35
PTPRD-205ENST00000397611 NAP1L2Q9ULW6 460 aaPredicted RBP6.63□□□□□ -1.35
PTPRD-205ENST00000397611 LRRC7Q96NW7 1537 aa6.63□□□□□ -1.35
PTPRD-205ENST00000397611 ATP10DQ9P241 1426 aa6.63□□□□□ -1.35
PTPRD-205ENST00000397611 ZSCAN30Q86W11 494 aa6.63□□□□□ -1.35
PTPRD-205ENST00000397611 LNPKQ9C0E8 428 aa6.63□□□□□ -1.35
PTPRD-205ENST00000397611 ARHGEF28Q8N1W1 1705 aaKnown RBP6.62□□□□□ -1.35
PTPRD-205ENST00000397611 PHF14O94880 888 aa6.62□□□□□ -1.35
PTPRD-205ENST00000397611 RAPGEF3O95398 923 aa6.62□□□□□ -1.35
PTPRD-205ENST00000397611 MSH6P52701 1360 aa6.62□□□□□ -1.35
PTPRD-205ENST00000397611 GAS2L2Q8NHY3 880 aa6.62□□□□□ -1.35
PTPRD-205ENST00000397611 QRICH2Q9H0J4 1663 aa6.62□□□□□ -1.35
PTPRD-205ENST00000397611 RNF214Q8ND24 703 aa6.62□□□□□ -1.35
PTPRD-205ENST00000397611 TNPO1Q92973 898 aaKnown RBP6.62□□□□□ -1.35
PTPRD-205ENST00000397611 TBX22Q9Y458 520 aa6.62□□□□□ -1.35
PTPRD-205ENST00000397611 TMEM131LA2VDJ0 1609 aa6.62□□□□□ -1.35
PTPRD-205ENST00000397611 TTC22Q5TAA0 569 aa6.61□□□□□ -1.35
PTPRD-205ENST00000397611 ZHX1Q9UKY1 873 aaPredicted RBP6.61□□□□□ -1.35
PTPRD-205ENST00000397611 TBC1D9Q6ZT07 1266 aa6.61□□□□□ -1.35
PTPRD-205ENST00000397611 FGD1P98174 961 aa6.61□□□□□ -1.35
PTPRD-205ENST00000397611 KIF2CQ99661 725 aa6.61□□□□□ -1.35
PTPRD-205ENST00000397611 STAP2Q9UGK3 403 aa6.61□□□□□ -1.35
PTPRD-205ENST00000397611 CUL4AQ13619 759 aa6.61□□□□□ -1.35
PTPRD-205ENST00000397611 MBIPQ9NS73 344 aa6.61□□□□□ -1.35
PTPRD-205ENST00000397611 HSP90AB4PQ58FF6 505 aa6.61□□□□□ -1.35
PTPRD-205ENST00000397611 ALKQ9UM73 1620 aa6.61□□□□□ -1.35
PTPRD-205ENST00000397611 OS9Q13438 667 aaPredicted RBP6.61□□□□□ -1.35
PTPRD-205ENST00000397611 PLEKHM2Q8IWE5 1019 aa6.61□□□□□ -1.35
PTPRD-205ENST00000397611 FLT4P35916 1363 aa6.6□□□□□ -1.35
PTPRD-205ENST00000397611 ANKRD45Q5TZF3 282 aa6.6□□□□□ -1.35
PTPRD-205ENST00000397611 TMEM2Q9UHN6 1383 aa6.6□□□□□ -1.35
PTPRD-205ENST00000397611 NUDT16Q96DE0 195 aaKnown RBP6.6□□□□□ -1.35
PTPRD-205ENST00000397611 ATP6V1DQ9Y5K8 247 aa6.6□□□□□ -1.35
PTPRD-205ENST00000397611 OVOS2A0A0J9YW53 1432 aa6.6□□□□□ -1.35
PTPRD-205ENST00000397611 OVOS2Q6IE36 1432 aa6.6□□□□□ -1.35
PTPRD-205ENST00000397611 CAVIN1Q6NZI2 390 aaKnown RBP6.6□□□□□ -1.35
PTPRD-205ENST00000397611 TNNQ9UQP3 1299 aa6.59□□□□□ -1.35
PTPRD-205ENST00000397611 MROH2AA6NES4 1674 aa6.59□□□□□ -1.35
PTPRD-205ENST00000397611 ERC2O15083 957 aa6.59□□□□□ -1.35
PTPRD-205ENST00000397611 BAG4O95429 457 aaKnown RBP6.59□□□□□ -1.35
PTPRD-205ENST00000397611 PHACTR3Q96KR7 559 aa6.59□□□□□ -1.35
PTPRD-205ENST00000397611 STK31Q9BXU1 1019 aa6.59□□□□□ -1.35
PTPRD-205ENST00000397611 SIRT2Q8IXJ6 389 aa6.59□□□□□ -1.35
PTPRD-205ENST00000397611 MPNDQ8N594 471 aa6.59□□□□□ -1.35
PTPRD-205ENST00000397611 GOLGA6L1Q8N7Z2 621 aa6.59□□□□□ -1.35
PTPRD-205ENST00000397611 SBNO1A3KN83 1393 aa6.59□□□□□ -1.35
PTPRD-205ENST00000397611 USP26Q9BXU7 913 aa6.59□□□□□ -1.36
PTPRD-205ENST00000397611 MTX1Q13505 466 aa6.58□□□□□ -1.36
PTPRD-205ENST00000397611 PDCL3Q9H2J4 239 aa6.58□□□□□ -1.36
PTPRD-205ENST00000397611 ANKARQ7Z5J8 1434 aa6.58□□□□□ -1.36
PTPRD-205ENST00000397611 VIRMAQ69YN4 1812 aaKnown RBP6.58□□□□□ -1.36
PTPRD-205ENST00000397611 IGSF1Q8N6C5 1336 aa6.58□□□□□ -1.36
PTPRD-205ENST00000397611 APPP05067 770 aa6.58□□□□□ -1.36
PTPRD-205ENST00000397611 CPS1P31327 1500 aa6.58□□□□□ -1.36
PTPRD-205ENST00000397611 SALL3Q9BXA9 1300 aa6.58□□□□□ -1.36
PTPRD-205ENST00000397611 CAVIN2O95810 425 aa6.58□□□□□ -1.36
PTPRD-205ENST00000397611 PDE4CQ08493 712 aa6.58□□□□□ -1.36
PTPRD-205ENST00000397611 CEP85Q6P2H3 762 aa6.58□□□□□ -1.36
PTPRD-205ENST00000397611 RGS12O14924 1447 aa6.58□□□□□ -1.36
PTPRD-205ENST00000397611 ZNF500O60304 480 aaPredicted RBP6.58□□□□□ -1.36
PTPRD-205ENST00000397611 CBX1P83916 185 aa6.58□□□□□ -1.36
PTPRD-205ENST00000397611 UVSSAQ2YD98 709 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms