RNA–Protein interactions for RNA: ENST00000397559.3

PDZD2-201, Transcript of PDZ domain containing 2, humanhuman

TSL 1 (best)

Gene PDZD2, Length 900 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD2-201ENST00000397559 BMP2P12643 396 aa11.1□□□□□ -0.63
PDZD2-201ENST00000397559 Q6ZVU0 165 aa11.1□□□□□ -0.63
PDZD2-201ENST00000397559 CCDC125Q86Z20 511 aa11.1□□□□□ -0.63
PDZD2-201ENST00000397559 CADPSQ9ULU8 1353 aa11.1□□□□□ -0.63
PDZD2-201ENST00000397559 ADD1P35611 737 aaKnown RBP11.09□□□□□ -0.63
PDZD2-201ENST00000397559 RNF135Q8IUD6 432 aa11.09□□□□□ -0.63
PDZD2-201ENST00000397559 TRIM47Q96LD4 638 aa11.09□□□□□ -0.63
PDZD2-201ENST00000397559 AGBL1Q96MI9 1066 aa11.09□□□□□ -0.63
PDZD2-201ENST00000397559 CCDC85AQ96PX6 553 aaPredicted RBP11.09□□□□□ -0.63
PDZD2-201ENST00000397559 TSEN34Q9BSV6 310 aaKnown RBP11.09□□□□□ -0.63
PDZD2-201ENST00000397559 A6NJR5 290 aa11.08□□□□□ -0.64
PDZD2-201ENST00000397559 SNRPBP14678 240 aaKnown RBP11.08□□□□□ -0.64
PDZD2-201ENST00000397559 FNBP4Q8N3X1 1017 aaPredicted RBP11.08□□□□□ -0.64
PDZD2-201ENST00000397559 TRIM52Q96A61 297 aa11.08□□□□□ -0.64
PDZD2-201ENST00000397559 KIFC2Q96AC6 838 aa11.08□□□□□ -0.64
PDZD2-201ENST00000397559 SCTRP47872 440 aa11.07□□□□□ -0.64
PDZD2-201ENST00000397559 RELBQ01201 579 aa11.07□□□□□ -0.64
PDZD2-201ENST00000397559 TSGA10IPQ3SY00 556 aa11.07□□□□□ -0.64
PDZD2-201ENST00000397559 PHTF2Q8N3S3 785 aa11.07□□□□□ -0.64
PDZD2-201ENST00000397559 ALG2Q9H553 416 aa11.07□□□□□ -0.64
PDZD2-201ENST00000397559 MROH2BQ7Z745 1585 aa11.07□□□□□ -0.64
PDZD2-201ENST00000397559 CC2D2BQ6DHV5 1058 aa11.06□□□□□ -0.64
PDZD2-201ENST00000397559 CDCA7Q9BWT1 371 aaPredicted RBP11.06□□□□□ -0.64
PDZD2-201ENST00000397559 DOLKQ9UPQ8 538 aa11.06□□□□□ -0.64
PDZD2-201ENST00000397559 ADH1AP07327 375 aa11.05□□□□□ -0.64
PDZD2-201ENST00000397559 ERVK-9P63128 1117 aa11.05□□□□□ -0.64
PDZD2-201ENST00000397559 ADAMTS19Q8TE59 1207 aa11.05□□□□□ -0.64
PDZD2-201ENST00000397559 ESF1Q9H501 851 aaKnown RBP11.05□□□□□ -0.64
PDZD2-201ENST00000397559 PIK3CDO00329 1044 aa11.04□□□□□ -0.64
PDZD2-201ENST00000397559 HDGFL1Q5TGJ6 251 aa11.04□□□□□ -0.64
PDZD2-201ENST00000397559 ZNF395Q9H8N7 513 aaPredicted RBP11.04□□□□□ -0.64
PDZD2-201ENST00000397559 OXLD1Q5BKU9 147 aa11.03□□□□□ -0.64
PDZD2-201ENST00000397559 ARXQ96QS3 562 aa11.03□□□□□ -0.64
PDZD2-201ENST00000397559 CEP164Q9UPV0 1460 aa11.03□□□□□ -0.64
PDZD2-201ENST00000397559 ATP5J2-PTCD1G3V325 749 aa11.01□□□□□ -0.65
PDZD2-201ENST00000397559 SPINT1O43278 529 aa11.01□□□□□ -0.65
PDZD2-201ENST00000397559 MYCP01106 439 aaPredicted RBP11.01□□□□□ -0.65
PDZD2-201ENST00000397559 KDF1Q8NAX2 398 aaPredicted RBP11.01□□□□□ -0.65
PDZD2-201ENST00000397559 PLPP7Q8NBV4 271 aa11.01□□□□□ -0.65
PDZD2-201ENST00000397559 SOBPA7XYQ1 873 aa11□□□□□ -0.65
PDZD2-201ENST00000397559 SKIP12755 728 aa11□□□□□ -0.65
PDZD2-201ENST00000397559 PTGIRP43119 386 aa11□□□□□ -0.65
PDZD2-201ENST00000397559 GLMNQ92990 594 aa11□□□□□ -0.65
PDZD2-201ENST00000397559 INSM2Q96T92 566 aaPredicted RBP11□□□□□ -0.65
PDZD2-201ENST00000397559 OSBPL3Q9H4L5 887 aa11□□□□□ -0.65
PDZD2-201ENST00000397559 CHIC2Q9UKJ5 165 aa11□□□□□ -0.65
PDZD2-201ENST00000397559 CYP2U1Q7Z449 544 aa10.99□□□□□ -0.65
PDZD2-201ENST00000397559 POLMQ9NP87 494 aaPredicted RBP10.99□□□□□ -0.65
PDZD2-201ENST00000397559 TRAK2O60296 914 aa10.98□□□□□ -0.65
PDZD2-201ENST00000397559 MAN1A2O60476 641 aa10.98□□□□□ -0.65
PDZD2-201ENST00000397559 USP4Q13107 963 aa10.98□□□□□ -0.65
PDZD2-201ENST00000397559 MAP7D1Q3KQU3 841 aa10.98□□□□□ -0.65
PDZD2-201ENST00000397559 SOS2Q07890 1332 aaPredicted RBP10.98□□□□□ -0.65
PDZD2-201ENST00000397559 FIGNL2A6NMB9 653 aa10.97□□□□□ -0.65
PDZD2-201ENST00000397559 TTLL8A6PVC2 850 aa10.97□□□□□ -0.65
PDZD2-201ENST00000397559 CTSOP43234 321 aaPredicted RBP10.97□□□□□ -0.65
PDZD2-201ENST00000397559 ZNF777Q9ULD5 760 aaPredicted RBP10.97□□□□□ -0.65
PDZD2-201ENST00000397559 FANCD2Q9BXW9 1451 aa10.97□□□□□ -0.65
PDZD2-201ENST00000397559 CALR3Q96L12 384 aaKnown RBP10.96□□□□□ -0.65
PDZD2-201ENST00000397559 UCN2Q96RP3 112 aa10.96□□□□□ -0.65
PDZD2-201ENST00000397559 CFTRP13569 1480 aa10.95□□□□□ -0.66
PDZD2-201ENST00000397559 A0A1W2PRU2 124 aa10.95□□□□□ -0.66
PDZD2-201ENST00000397559 MEN1O00255 615 aa10.95□□□□□ -0.66
PDZD2-201ENST00000397559 SIRT1Q96EB6 747 aa10.95□□□□□ -0.66
PDZD2-201ENST00000397559 ARHGEF10LQ9HCE6 1279 aa10.95□□□□□ -0.66
PDZD2-201ENST00000397559 DNMT3LQ9UJW3 386 aa10.95□□□□□ -0.66
PDZD2-201ENST00000397559 DEPDC4Q8N2C3 294 aa10.94□□□□□ -0.66
PDZD2-201ENST00000397559 NFATC2IPQ8NCF5 419 aa10.94□□□□□ -0.66
PDZD2-201ENST00000397559 RAB6BQ9NRW1 208 aa10.94□□□□□ -0.66
PDZD2-201ENST00000397559 TBC1D9Q6ZT07 1266 aa10.93□□□□□ -0.66
PDZD2-201ENST00000397559 HOMEZQ8IX15 550 aa10.93□□□□□ -0.66
PDZD2-201ENST00000397559 ZNF775Q96BV0 537 aaPredicted RBP10.93□□□□□ -0.66
PDZD2-201ENST00000397559 USP17L5A8MUK1 530 aa10.92□□□□□ -0.66
PDZD2-201ENST00000397559 NCOA4Q13772 614 aa10.92□□□□□ -0.66
PDZD2-201ENST00000397559 EML3Q32P44 896 aa10.92□□□□□ -0.66
PDZD2-201ENST00000397559 GNRH1P01148 92 aa10.91□□□□□ -0.66
PDZD2-201ENST00000397559 FOXD4L5Q5VV16 416 aaPredicted RBP10.91□□□□□ -0.66
PDZD2-201ENST00000397559 RNF217Q8TC41 542 aa10.91□□□□□ -0.66
PDZD2-201ENST00000397559 NLRP3Q96P20 1036 aa10.91□□□□□ -0.66
PDZD2-201ENST00000397559 WIZO95785 1651 aa10.91□□□□□ -0.66
PDZD2-201ENST00000397559 ATP9BO43861 1147 aa10.9□□□□□ -0.66
PDZD2-201ENST00000397559 STAU1O95793 577 aaKnown RBP10.9□□□□□ -0.66
PDZD2-201ENST00000397559 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.9□□□□□ -0.66
PDZD2-201ENST00000397559 RIMBP3CA6NJZ7 1639 aa10.9□□□□□ -0.66
PDZD2-201ENST00000397559 RIMBP3BA6NNM3 1639 aa10.9□□□□□ -0.66
PDZD2-201ENST00000397559 RIMBP3Q9UFD9 1639 aa10.9□□□□□ -0.66
PDZD2-201ENST00000397559 CLN3Q13286 438 aa10.89□□□□□ -0.67
PDZD2-201ENST00000397559 NOD1Q9Y239 953 aa10.89□□□□□ -0.67
PDZD2-201ENST00000397559 URB2Q14146 1524 aaKnown RBP10.89□□□□□ -0.67
PDZD2-201ENST00000397559 USP17L3A6NCW0 530 aa10.88□□□□□ -0.67
PDZD2-201ENST00000397559 USP17L4A6NCW7 530 aa10.88□□□□□ -0.67
PDZD2-201ENST00000397559 LZTS3O60299 673 aaPredicted RBP10.88□□□□□ -0.67
PDZD2-201ENST00000397559 PRDM2Q13029 1718 aa10.88□□□□□ -0.67
PDZD2-201ENST00000397559 USP17L2Q6R6M4 530 aa10.88□□□□□ -0.67
PDZD2-201ENST00000397559 USP17L1Q7RTZ2 530 aa10.88□□□□□ -0.67
PDZD2-201ENST00000397559 TFIP11Q9UBB9 837 aaKnown RBP10.88□□□□□ -0.67
PDZD2-201ENST00000397559 IL2RAP01589 272 aa10.87□□□□□ -0.67
PDZD2-201ENST00000397559 RNF144AP50876 292 aaPredicted RBP10.87□□□□□ -0.67
PDZD2-201ENST00000397559 PRICKLE2Q7Z3G6 844 aa10.87□□□□□ -0.67
PDZD2-201ENST00000397559 CNKSR1Q969H4 720 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms