RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 TBC1D2Q9BYX2 928 aa29.79■■■□□ 2.36
PABPN1-202ENST00000397276 DIP2AQ14689 1571 aa29.78■■■□□ 2.36
PABPN1-202ENST00000397276 RGPD8O14715 1765 aaPredicted RBP29.78■■■□□ 2.36
PABPN1-202ENST00000397276 LTV1Q96GA3 475 aaPredicted RBP29.78■■■□□ 2.36
PABPN1-202ENST00000397276 FLT4P35916 1363 aa29.78■■■□□ 2.36
PABPN1-202ENST00000397276 GCC1Q96CN9 775 aa29.77■■■□□ 2.36
PABPN1-202ENST00000397276 FER1L4A9Z1Z3 1794 aa29.77■■■□□ 2.36
PABPN1-202ENST00000397276 SBNO1A3KN83 1393 aa29.76■■■□□ 2.35
PABPN1-202ENST00000397276 ABTB2Q8N961 1025 aa29.76■■■□□ 2.35
PABPN1-202ENST00000397276 TSPYL4Q9UJ04 414 aa29.75■■■□□ 2.35
PABPN1-202ENST00000397276 SLC4A2P04920 1241 aa29.74■■■□□ 2.35
PABPN1-202ENST00000397276 ARHGEF10O15013 1369 aa29.73■■■□□ 2.35
PABPN1-202ENST00000397276 NALCNQ8IZF0 1738 aa29.72■■■□□ 2.35
PABPN1-202ENST00000397276 CRB1P82279 1406 aa29.71■■■□□ 2.35
PABPN1-202ENST00000397276 HAP1P54257 671 aaPredicted RBP29.69■■■□□ 2.34
PABPN1-202ENST00000397276 RIMS1Q86UR5 1692 aaKnown RBP29.69■■■□□ 2.34
PABPN1-202ENST00000397276 PLEKHG5O94827 1062 aa29.69■■■□□ 2.34
PABPN1-202ENST00000397276 INTS3Q68E01 1043 aaKnown RBP29.69■■■□□ 2.34
PABPN1-202ENST00000397276 HOXC9P31274 260 aa29.68■■■□□ 2.34
PABPN1-202ENST00000397276 IGSF1Q8N6C5 1336 aa29.68■■■□□ 2.34
PABPN1-202ENST00000397276 CEP170BQ9Y4F5 1589 aaPredicted RBP29.68■■■□□ 2.34
PABPN1-202ENST00000397276 SLC4A10Q6U841 1118 aa29.67■■■□□ 2.34
PABPN1-202ENST00000397276 G2E3Q7L622 706 aa29.67■■■□□ 2.34
PABPN1-202ENST00000397276 KIAA0232Q92628 1395 aa29.67■■■□□ 2.34
PABPN1-202ENST00000397276 RGPD1P0DJD0 1748 aa29.66■■■□□ 2.34
PABPN1-202ENST00000397276 APBB1O00213 710 aa29.66■■■□□ 2.34
PABPN1-202ENST00000397276 ARXQ96QS3 562 aa29.66■■■□□ 2.34
PABPN1-202ENST00000397276 BMP2KLQ5H9B9 411 aa29.66■■■□□ 2.34
PABPN1-202ENST00000397276 USHBP1Q8N6Y0 703 aa29.66■■■□□ 2.34
PABPN1-202ENST00000397276 NECTIN2Q92692 538 aa29.66■■■□□ 2.34
PABPN1-202ENST00000397276 ZBTB7CA1YPR0 619 aa29.65■■■□□ 2.34
PABPN1-202ENST00000397276 F6X3S4 739 aa29.65■■■□□ 2.34
PABPN1-202ENST00000397276 GAS2L2Q8NHY3 880 aa29.65■■■□□ 2.34
PABPN1-202ENST00000397276 MEIS3Q99687 375 aa29.65■■■□□ 2.34
PABPN1-202ENST00000397276 PIK3C2AO00443 1686 aa29.64■■■□□ 2.34
PABPN1-202ENST00000397276 RGS12O14924 1447 aa29.64■■■□□ 2.33
PABPN1-202ENST00000397276 KDRP35968 1356 aa29.64■■■□□ 2.33
PABPN1-202ENST00000397276 MSH6P52701 1360 aa29.63■■■□□ 2.33
PABPN1-202ENST00000397276 C16orf71Q8IYS4 520 aaPredicted RBP29.63■■■□□ 2.33
PABPN1-202ENST00000397276 FAM43AQ8N2R8 423 aa29.63■■■□□ 2.33
PABPN1-202ENST00000397276 ANTXR1Q9H6X2 564 aa29.63■■■□□ 2.33
PABPN1-202ENST00000397276 ANKLE2Q86XL3 938 aa29.62■■■□□ 2.33
PABPN1-202ENST00000397276 PHF8Q9UPP1 1060 aa29.62■■■□□ 2.33
PABPN1-202ENST00000397276 PTPRCP08575 1304 aa29.6■■■□□ 2.33
PABPN1-202ENST00000397276 DCTPP1Q9H773 170 aa29.6■■■□□ 2.33
PABPN1-202ENST00000397276 XRN1Q8IZH2 1706 aaKnown RBP29.6■■■□□ 2.33
PABPN1-202ENST00000397276 GNAT3A8MTJ3 354 aa29.59■■■□□ 2.33
PABPN1-202ENST00000397276 ANKRD44Q8N8A2 993 aa29.59■■■□□ 2.33
PABPN1-202ENST00000397276 ANKARQ7Z5J8 1434 aa29.59■■■□□ 2.33
PABPN1-202ENST00000397276 ESCO1Q5FWF5 840 aa29.58■■■□□ 2.33
PABPN1-202ENST00000397276 CEP85Q6P2H3 762 aa29.58■■■□□ 2.33
PABPN1-202ENST00000397276 TBC1D9Q6ZT07 1266 aa29.58■■■□□ 2.33
PABPN1-202ENST00000397276 KIF24Q5T7B8 1368 aa29.58■■■□□ 2.33
PABPN1-202ENST00000397276 FMN2Q9NZ56 1722 aa29.57■■■□□ 2.32
PABPN1-202ENST00000397276 SMARCA5O60264 1052 aaPredicted RBP29.57■■■□□ 2.32
PABPN1-202ENST00000397276 PLEKHM2Q8IWE5 1019 aa29.56■■■□□ 2.32
PABPN1-202ENST00000397276 IL17REQ8NFR9 667 aa29.56■■■□□ 2.32
PABPN1-202ENST00000397276 OTUD7AQ8TE49 926 aaPredicted RBP29.56■■■□□ 2.32
PABPN1-202ENST00000397276 RRAGDQ9NQL2 400 aaPredicted RBP29.55■■■□□ 2.32
PABPN1-202ENST00000397276 RTL1A6NKG5 1358 aa29.55■■■□□ 2.32
PABPN1-202ENST00000397276 PSME1Q06323 249 aa29.55■■■□□ 2.32
PABPN1-202ENST00000397276 RPAP2Q8IXW5 612 aaPredicted RBP29.55■■■□□ 2.32
PABPN1-202ENST00000397276 GSPT1P15170 499 aaKnown RBP29.54■■■□□ 2.32
PABPN1-202ENST00000397276 STK31Q9BXU1 1019 aa29.54■■■□□ 2.32
PABPN1-202ENST00000397276 HSCBQ8IWL3 235 aa29.53■■■□□ 2.32
PABPN1-202ENST00000397276 ATP10DQ9P241 1426 aa29.53■■■□□ 2.32
PABPN1-202ENST00000397276 RBM25P49756 843 aaKnown RBP29.53■■■□□ 2.32
PABPN1-202ENST00000397276 XPCQ01831 940 aaPredicted RBP29.52■■■□□ 2.32
PABPN1-202ENST00000397276 FKBP5Q13451 457 aaPredicted RBP29.5■■■□□ 2.31
PABPN1-202ENST00000397276 HTATSF1O43719 755 aaKnown RBP29.48■■■□□ 2.31
PABPN1-202ENST00000397276 LMOD2Q6P5Q4 547 aa29.48■■■□□ 2.31
PABPN1-202ENST00000397276 FLIIQ13045 1269 aa29.47■■■□□ 2.31
PABPN1-202ENST00000397276 CDC45O75419 566 aa29.47■■■□□ 2.31
PABPN1-202ENST00000397276 NBPF6Q5VWK0 638 aa29.47■■■□□ 2.31
PABPN1-202ENST00000397276 NBPF4Q96M43 638 aa29.47■■■□□ 2.31
PABPN1-202ENST00000397276 GZF1Q9H116 711 aaPredicted RBP29.47■■■□□ 2.31
PABPN1-202ENST00000397276 MAP3K5Q99683 1374 aa29.47■■■□□ 2.31
PABPN1-202ENST00000397276 TAF7Q15545 349 aaPredicted RBP29.47■■■□□ 2.31
PABPN1-202ENST00000397276 CCDC30Q5VVM6 783 aa29.47■■■□□ 2.31
PABPN1-202ENST00000397276 UBE2Q2Q8WVN8 375 aa29.47■■■□□ 2.31
PABPN1-202ENST00000397276 CCT4P50991 539 aaKnown RBP29.46■■■□□ 2.31
PABPN1-202ENST00000397276 RBM42Q9BTD8 480 aaKnown RBP29.46■■■□□ 2.31
PABPN1-202ENST00000397276 TTC22Q5TAA0 569 aa29.45■■■□□ 2.31
PABPN1-202ENST00000397276 ORAI2Q96SN7 254 aa29.45■■■□□ 2.3
PABPN1-202ENST00000397276 KIF2CQ99661 725 aa29.45■■■□□ 2.3
PABPN1-202ENST00000397276 IP6K1Q92551 441 aa29.44■■■□□ 2.3
PABPN1-202ENST00000397276 LRRC59Q96AG4 307 aaKnown RBP29.44■■■□□ 2.3
PABPN1-202ENST00000397276 NWD1Q149M9 1564 aa29.44■■■□□ 2.3
PABPN1-202ENST00000397276 SETD1BQ9UPS6 1966 aaKnown RBP29.43■■■□□ 2.3
PABPN1-202ENST00000397276 LGR6Q9HBX8 967 aa29.42■■■□□ 2.3
PABPN1-202ENST00000397276 MARF1Q9Y4F3 1742 aaKnown RBP29.41■■■□□ 2.3
PABPN1-202ENST00000397276 CD2BP2O95400 341 aaKnown RBP29.41■■■□□ 2.3
PABPN1-202ENST00000397276 FOXD4L1Q9NU39 408 aa29.41■■■□□ 2.3
PABPN1-202ENST00000397276 EXOC6BQ9Y2D4 811 aa29.41■■■□□ 2.3
PABPN1-202ENST00000397276 HMMRO75330 724 aa29.4■■■□□ 2.3
PABPN1-202ENST00000397276 EIF2S2P20042 333 aaKnown RBP29.4■■■□□ 2.3
PABPN1-202ENST00000397276 PANK2Q9BZ23 570 aa29.4■■■□□ 2.3
PABPN1-202ENST00000397276 CHMP5Q9NZZ3 219 aa29.4■■■□□ 2.3
PABPN1-202ENST00000397276 GNAI2P04899 355 aa29.4■■■□□ 2.3
PABPN1-202ENST00000397276 HSP90AB1P08238 724 aaKnown RBP29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms