RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 AEBP2Q6ZN18 517 aaPredicted RBP18.82■□□□□ 0.6
MCF2L-205ENST00000397017 SIRT1Q96EB6 747 aa18.82■□□□□ 0.6
MCF2L-205ENST00000397017 MEIS3Q99687 375 aa18.82■□□□□ 0.6
MCF2L-205ENST00000397017 CHMP4AQ9BY43 222 aa18.82■□□□□ 0.6
MCF2L-205ENST00000397017 TULP4Q9NRJ4 1543 aa18.82■□□□□ 0.6
MCF2L-205ENST00000397017 FLIIQ13045 1269 aa18.82■□□□□ 0.6
MCF2L-205ENST00000397017 CCDC85AQ96PX6 553 aaPredicted RBP18.82■□□□□ 0.6
MCF2L-205ENST00000397017 DDX58O95786 925 aaKnown RBP18.82■□□□□ 0.6
MCF2L-205ENST00000397017 PIK3C2BO00750 1634 aa18.82■□□□□ 0.6
MCF2L-205ENST00000397017 MAP4K4O95819 1239 aaPredicted RBP18.81■□□□□ 0.6
MCF2L-205ENST00000397017 GNAI2P04899 355 aa18.81■□□□□ 0.6
MCF2L-205ENST00000397017 RNF123Q5XPI4 1314 aa18.81■□□□□ 0.6
MCF2L-205ENST00000397017 SRCIN1Q9C0H9 1055 aa18.81■□□□□ 0.6
MCF2L-205ENST00000397017 NPHP3Q7Z494 1330 aa18.81■□□□□ 0.6
MCF2L-205ENST00000397017 MROH2AA6NES4 1674 aa18.81■□□□□ 0.6
MCF2L-205ENST00000397017 TSHZ3Q63HK5 1081 aa18.81■□□□□ 0.6
MCF2L-205ENST00000397017 CHD1LQ86WJ1 897 aa18.81■□□□□ 0.6
MCF2L-205ENST00000397017 MRPL50Q8N5N7 158 aaKnown RBP18.81■□□□□ 0.6
MCF2L-205ENST00000397017 IP6K1Q92551 441 aa18.81■□□□□ 0.6
MCF2L-205ENST00000397017 VWDEQ8N2E2 1590 aa18.8■□□□□ 0.6
MCF2L-205ENST00000397017 FOXD4L5Q5VV16 416 aaPredicted RBP18.8■□□□□ 0.6
MCF2L-205ENST00000397017 FOXD4L4Q8WXT5 416 aaPredicted RBP18.8■□□□□ 0.6
MCF2L-205ENST00000397017 IL16Q14005 1332 aa18.8■□□□□ 0.6
MCF2L-205ENST00000397017 TMEM94Q12767 1356 aa18.79■□□□□ 0.6
MCF2L-205ENST00000397017 GORABQ5T7V8 394 aa18.79■□□□□ 0.6
MCF2L-205ENST00000397017 PI4KAP2A4QPH2 592 aa18.79■□□□□ 0.6
MCF2L-205ENST00000397017 PI4KAP1Q8N8J0 262 aa18.79■□□□□ 0.6
MCF2L-205ENST00000397017 GNAI3P08754 354 aa18.78■□□□□ 0.6
MCF2L-205ENST00000397017 NFATC2IPQ8NCF5 419 aa18.78■□□□□ 0.6
MCF2L-205ENST00000397017 GZF1Q9H116 711 aaPredicted RBP18.78■□□□□ 0.6
MCF2L-205ENST00000397017 PTPRMP28827 1452 aa18.78■□□□□ 0.6
MCF2L-205ENST00000397017 SRGAP3O43295 1099 aa18.78■□□□□ 0.6
MCF2L-205ENST00000397017 KIAA1211Q6ZU35 1233 aa18.78■□□□□ 0.6
MCF2L-205ENST00000397017 CHPF2Q9P2E5 772 aa18.78■□□□□ 0.6
MCF2L-205ENST00000397017 SETD1BQ9UPS6 1966 aaKnown RBP18.78■□□□□ 0.6
MCF2L-205ENST00000397017 C22orf23Q9BZE7 217 aa18.77■□□□□ 0.6
MCF2L-205ENST00000397017 PHAXQ9H814 394 aaKnown RBP18.77■□□□□ 0.6
MCF2L-205ENST00000397017 FGD1P98174 961 aa18.77■□□□□ 0.6
MCF2L-205ENST00000397017 KCNQ3O43525 872 aa18.77■□□□□ 0.59
MCF2L-205ENST00000397017 LRRFIP2Q9Y608 721 aaKnown RBP18.76■□□□□ 0.59
MCF2L-205ENST00000397017 USP6P35125 1406 aa18.76■□□□□ 0.59
MCF2L-205ENST00000397017 CCT4P50991 539 aaKnown RBP18.76■□□□□ 0.59
MCF2L-205ENST00000397017 GTF2E1P29083 439 aaPredicted RBP18.76■□□□□ 0.59
MCF2L-205ENST00000397017 AMOTQ4VCS5 1084 aa18.76■□□□□ 0.59
MCF2L-205ENST00000397017 QRICH2Q9H0J4 1663 aa18.76■□□□□ 0.59
MCF2L-205ENST00000397017 SBNO1A3KN83 1393 aa18.75■□□□□ 0.59
MCF2L-205ENST00000397017 ANO2Q9NQ90 1003 aa18.75■□□□□ 0.59
MCF2L-205ENST00000397017 DEPDC5O75140 1603 aa18.75■□□□□ 0.59
MCF2L-205ENST00000397017 FOXD4L6Q3SYB3 417 aaPredicted RBP18.75■□□□□ 0.59
MCF2L-205ENST00000397017 FOXD4L3Q6VB84 417 aaPredicted RBP18.75■□□□□ 0.59
MCF2L-205ENST00000397017 ADGRB1O14514 1584 aa18.75■□□□□ 0.59
MCF2L-205ENST00000397017 ZNF335Q9H4Z2 1342 aaPredicted RBP18.75■□□□□ 0.59
MCF2L-205ENST00000397017 TRMT2AQ8IZ69 625 aaKnown RBP18.74■□□□□ 0.59
MCF2L-205ENST00000397017 ATP5J2-PTCD1G3V325 749 aa18.74■□□□□ 0.59
MCF2L-205ENST00000397017 IFIT2P09913 472 aaKnown RBP18.74■□□□□ 0.59
MCF2L-205ENST00000397017 G3BP1Q13283 466 aaKnown RBP eCLIP18.74■□□□□ 0.59
MCF2L-205ENST00000397017 MEX3CQ5U5Q3 659 aaKnown RBP18.74■□□□□ 0.59
MCF2L-205ENST00000397017 IL17REQ8NFR9 667 aa18.74■□□□□ 0.59
MCF2L-205ENST00000397017 NPHP4O75161 1426 aaPredicted RBP18.74■□□□□ 0.59
MCF2L-205ENST00000397017 C16orf71Q8IYS4 520 aaPredicted RBP18.73■□□□□ 0.59
MCF2L-205ENST00000397017 SLAIN2Q9P270 581 aa18.73■□□□□ 0.59
MCF2L-205ENST00000397017 AAMPQ13685 434 aa18.73■□□□□ 0.59
MCF2L-205ENST00000397017 NUTM1Q86Y26 1132 aa18.73■□□□□ 0.59
MCF2L-205ENST00000397017 NEUROD6Q96NK8 337 aa18.73■□□□□ 0.59
MCF2L-205ENST00000397017 EIF5BO60841 1220 aaKnown RBP18.72■□□□□ 0.59
MCF2L-205ENST00000397017 RTN4Q9NQC3 1192 aaKnown RBP18.72■□□□□ 0.59
MCF2L-205ENST00000397017 FAM135BQ49AJ0 1406 aa18.72■□□□□ 0.59
MCF2L-205ENST00000397017 ADAMTS13Q76LX8 1427 aa18.72■□□□□ 0.59
MCF2L-205ENST00000397017 GCC1Q96CN9 775 aa18.72■□□□□ 0.59
MCF2L-205ENST00000397017 CHL1O00533 1208 aa18.71■□□□□ 0.59
MCF2L-205ENST00000397017 ARHGEF40Q8TER5 1519 aa18.71■□□□□ 0.59
MCF2L-205ENST00000397017 IFNL2Q8IZJ0 200 aa18.7■□□□□ 0.58
MCF2L-205ENST00000397017 PREX1Q8TCU6 1659 aa18.7■□□□□ 0.58
MCF2L-205ENST00000397017 RICTORQ6R327 1708 aa18.7■□□□□ 0.58
MCF2L-205ENST00000397017 MCCP23508 829 aa18.7■□□□□ 0.58
MCF2L-205ENST00000397017 NRXN1Q9ULB1 1477 aa18.7■□□□□ 0.58
MCF2L-205ENST00000397017 ZBTB3Q9H5J0 574 aa18.7■□□□□ 0.58
MCF2L-205ENST00000397017 AGLP35573 1532 aa18.7■□□□□ 0.58
MCF2L-205ENST00000397017 MYD88Q99836 296 aa18.69■□□□□ 0.58
MCF2L-205ENST00000397017 MAP3K2Q9Y2U5 619 aa18.69■□□□□ 0.58
MCF2L-205ENST00000397017 ZBTB40Q9NUA8 1239 aa18.69■□□□□ 0.58
MCF2L-205ENST00000397017 SEC24BO95487 1268 aa18.69■□□□□ 0.58
MCF2L-205ENST00000397017 DNAAF4Q8WXU2 420 aa18.69■□□□□ 0.58
MCF2L-205ENST00000397017 ATP7BP35670 1465 aa18.69■□□□□ 0.58
MCF2L-205ENST00000397017 PTPRUQ92729 1446 aa18.69■□□□□ 0.58
MCF2L-205ENST00000397017 HDAC5Q9UQL6 1122 aa18.68■□□□□ 0.58
MCF2L-205ENST00000397017 GPATCH3Q96I76 525 aa18.68■□□□□ 0.58
MCF2L-205ENST00000397017 AKAP4Q5JQC9 854 aa18.68■□□□□ 0.58
MCF2L-205ENST00000397017 AXIN2Q9Y2T1 843 aa18.68■□□□□ 0.58
MCF2L-205ENST00000397017 SETBP1Q9Y6X0 1596 aa18.67■□□□□ 0.58
MCF2L-205ENST00000397017 LRRCC1Q9C099 1032 aa18.67■□□□□ 0.58
MCF2L-205ENST00000397017 DBF4Q9UBU7 674 aaPredicted RBP18.67■□□□□ 0.58
MCF2L-205ENST00000397017 INSRP06213 1382 aa18.67■□□□□ 0.58
MCF2L-205ENST00000397017 CWF19L2Q2TBE0 894 aaKnown RBP18.67■□□□□ 0.58
MCF2L-205ENST00000397017 ANO8Q9HCE9 1232 aaPredicted RBP18.67■□□□□ 0.58
MCF2L-205ENST00000397017 MAP3K5Q99683 1374 aa18.67■□□□□ 0.58
MCF2L-205ENST00000397017 RPAP2Q8IXW5 612 aaPredicted RBP18.67■□□□□ 0.58
MCF2L-205ENST00000397017 CLASRPQ8N2M8 674 aaKnown RBP18.66■□□□□ 0.58
MCF2L-205ENST00000397017 DIAPH3Q9NSV4 1193 aa18.66■□□□□ 0.58
MCF2L-205ENST00000397017 BTG4Q9NY30 223 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms