RNA–Protein interactions for RNA: ENST00000396076.5

LDHB-203, Transcript of lactate dehydrogenase B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LDHB, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-203ENST00000396076 TATP17735 454 aaPredicted RBP30.56■■■□□ 2.48
LDHB-203ENST00000396076 DCTN1Q14203 1278 aa30.56■■■□□ 2.48
LDHB-203ENST00000396076 SPATA31A6Q5VVP1 1343 aa30.56■■■□□ 2.48
LDHB-203ENST00000396076 DLG5Q8TDM6 1919 aa30.55■■■□□ 2.48
LDHB-203ENST00000396076 GNAT3A8MTJ3 354 aa30.55■■■□□ 2.48
LDHB-203ENST00000396076 RTF1Q92541 710 aaKnown RBP30.55■■■□□ 2.48
LDHB-203ENST00000396076 MCM10Q7L590 875 aa30.53■■■□□ 2.48
LDHB-203ENST00000396076 PLEKHG2Q9H7P9 1386 aa30.53■■■□□ 2.48
LDHB-203ENST00000396076 MAP3K5Q99683 1374 aa30.52■■■□□ 2.48
LDHB-203ENST00000396076 CRB1P82279 1406 aa30.52■■■□□ 2.48
LDHB-203ENST00000396076 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.52■■■□□ 2.48
LDHB-203ENST00000396076 SUPT16HQ9Y5B9 1047 aaKnown RBP30.52■■■□□ 2.48
LDHB-203ENST00000396076 MEGF6O75095 1541 aa30.51■■■□□ 2.47
LDHB-203ENST00000396076 ZNF530Q6P9A1 599 aaPredicted RBP30.51■■■□□ 2.47
LDHB-203ENST00000396076 IFT57Q9NWB7 429 aa30.5■■■□□ 2.47
LDHB-203ENST00000396076 AKAP4Q5JQC9 854 aa30.49■■■□□ 2.47
LDHB-203ENST00000396076 RCAN3Q9UKA8 241 aa30.49■■■□□ 2.47
LDHB-203ENST00000396076 FANCIQ9NVI1 1328 aa30.48■■■□□ 2.47
LDHB-203ENST00000396076 ZNF853P0CG23 659 aa30.48■■■□□ 2.47
LDHB-203ENST00000396076 GNAI1P63096 354 aa30.48■■■□□ 2.47
LDHB-203ENST00000396076 SPG7Q9UQ90 795 aa30.48■■■□□ 2.47
LDHB-203ENST00000396076 TSR2Q969E8 191 aaKnown RBP30.47■■■□□ 2.47
LDHB-203ENST00000396076 CFAP44Q96MT7 982 aa30.47■■■□□ 2.47
LDHB-203ENST00000396076 IL17REQ8NFR9 667 aa30.47■■■□□ 2.47
LDHB-203ENST00000396076 LAS1LQ9Y4W2 734 aaKnown RBP30.47■■■□□ 2.47
LDHB-203ENST00000396076 C1orf141Q5JVX7 400 aa30.46■■■□□ 2.47
LDHB-203ENST00000396076 SLIT2O94813 1529 aa30.46■■■□□ 2.47
LDHB-203ENST00000396076 PLCH1Q4KWH8 1693 aa30.45■■■□□ 2.47
LDHB-203ENST00000396076 IL2RBP14784 551 aa30.45■■■□□ 2.47
LDHB-203ENST00000396076 OVOS2A0A0G2JMS6 1433 aa30.44■■■□□ 2.46
LDHB-203ENST00000396076 USP35Q9P2H5 1018 aa30.43■■■□□ 2.46
LDHB-203ENST00000396076 LRP6O75581 1613 aa30.42■■■□□ 2.46
LDHB-203ENST00000396076 NGLY1Q96IV0 654 aa30.42■■■□□ 2.46
LDHB-203ENST00000396076 C8orf37Q96NL8 207 aa30.42■■■□□ 2.46
LDHB-203ENST00000396076 CHL1O00533 1208 aa30.41■■■□□ 2.46
LDHB-203ENST00000396076 MBIPQ9NS73 344 aa30.41■■■□□ 2.46
LDHB-203ENST00000396076 CEMIPQ8WUJ3 1361 aa30.4■■■□□ 2.46
LDHB-203ENST00000396076 EXOSC9Q06265 439 aaKnown RBP30.39■■■□□ 2.46
LDHB-203ENST00000396076 MPRIPQ6WCQ1 1025 aa30.39■■■□□ 2.46
LDHB-203ENST00000396076 ZCRB1Q8TBF4 217 aaKnown RBP30.39■■■□□ 2.46
LDHB-203ENST00000396076 LGR6Q9HBX8 967 aa30.39■■■□□ 2.46
LDHB-203ENST00000396076 NRAPQ86VF7 1730 aa30.39■■■□□ 2.45
LDHB-203ENST00000396076 PHKG2P15735 406 aa30.38■■■□□ 2.45
LDHB-203ENST00000396076 UNC5CLQ8IV45 518 aa30.38■■■□□ 2.45
LDHB-203ENST00000396076 IFNL2Q8IZJ0 200 aa30.38■■■□□ 2.45
LDHB-203ENST00000396076 FNBP4Q8N3X1 1017 aaPredicted RBP30.38■■■□□ 2.45
LDHB-203ENST00000396076 NWD2Q9ULI1 1742 aa30.38■■■□□ 2.45
LDHB-203ENST00000396076 RNF123Q5XPI4 1314 aa30.38■■■□□ 2.45
LDHB-203ENST00000396076 CYP27B1O15528 508 aa30.37■■■□□ 2.45
LDHB-203ENST00000396076 RNMTO43148 476 aaKnown RBP30.37■■■□□ 2.45
LDHB-203ENST00000396076 GTF3C3Q9Y5Q9 886 aa30.37■■■□□ 2.45
LDHB-203ENST00000396076 SPATA31A1Q5TZJ5 1347 aa30.36■■■□□ 2.45
LDHB-203ENST00000396076 CT47B1P0C2W7 299 aaPredicted RBP30.36■■■□□ 2.45
LDHB-203ENST00000396076 PKD1L3Q7Z443 1732 aa30.35■■■□□ 2.45
LDHB-203ENST00000396076 PARP4Q9UKK3 1724 aaKnown RBP30.35■■■□□ 2.45
LDHB-203ENST00000396076 TAF7Q15545 349 aaPredicted RBP30.35■■■□□ 2.45
LDHB-203ENST00000396076 THRAP3Q9Y2W1 955 aaKnown RBP30.34■■■□□ 2.45
LDHB-203ENST00000396076 LRRC37A3O60309 1634 aa30.34■■■□□ 2.45
LDHB-203ENST00000396076 SPATA31A5Q5VU36 1347 aa30.34■■■□□ 2.45
LDHB-203ENST00000396076 SPATA31A7Q8IWB4 1347 aa30.34■■■□□ 2.45
LDHB-203ENST00000396076 DISP2A7MBM2 1401 aa30.33■■■□□ 2.45
LDHB-203ENST00000396076 MEX3CQ5U5Q3 659 aaKnown RBP30.33■■■□□ 2.45
LDHB-203ENST00000396076 BCL9LQ86UU0 1499 aa30.33■■■□□ 2.45
LDHB-203ENST00000396076 PCDH11XQ9BZA7 1347 aa30.33■■■□□ 2.45
LDHB-203ENST00000396076 PCDH11YQ9BZA8 1340 aa30.33■■■□□ 2.45
LDHB-203ENST00000396076 BABAM1Q9NWV8 329 aa30.32■■■□□ 2.44
LDHB-203ENST00000396076 MIS18AQ9NYP9 233 aa30.32■■■□□ 2.44
LDHB-203ENST00000396076 TSPYL4Q9UJ04 414 aa30.32■■■□□ 2.44
LDHB-203ENST00000396076 NEFLP07196 543 aa30.31■■■□□ 2.44
LDHB-203ENST00000396076 HSP90AB1P08238 724 aaKnown RBP30.31■■■□□ 2.44
LDHB-203ENST00000396076 TEFQ10587 303 aa30.3■■■□□ 2.44
LDHB-203ENST00000396076 CDCA7Q9BWT1 371 aaPredicted RBP30.3■■■□□ 2.44
LDHB-203ENST00000396076 VPS72Q15906 364 aa30.29■■■□□ 2.44
LDHB-203ENST00000396076 DCAF5Q96JK2 942 aa30.29■■■□□ 2.44
LDHB-203ENST00000396076 USP21Q9UK80 565 aa30.29■■■□□ 2.44
LDHB-203ENST00000396076 CCDC9Q9Y3X0 531 aaKnown RBP30.29■■■□□ 2.44
LDHB-203ENST00000396076 RRP1P56182 461 aaKnown RBP30.28■■■□□ 2.44
LDHB-203ENST00000396076 KDM6AO15550 1401 aaPredicted RBP30.27■■■□□ 2.44
LDHB-203ENST00000396076 RARSP54136 660 aaKnown RBP30.27■■■□□ 2.44
LDHB-203ENST00000396076 C8orf58Q8NAV2 365 aa30.27■■■□□ 2.44
LDHB-203ENST00000396076 ADAMTS7Q9UKP4 1686 aa30.26■■■□□ 2.43
LDHB-203ENST00000396076 NKX1-1Q15270 411 aaPredicted RBP30.26■■■□□ 2.43
LDHB-203ENST00000396076 BARGINQ6ZT62 677 aa30.26■■■□□ 2.43
LDHB-203ENST00000396076 DDX54Q8TDD1 881 aaKnown RBP30.26■■■□□ 2.43
LDHB-203ENST00000396076 TSPYL6Q8N831 410 aa30.25■■■□□ 2.43
LDHB-203ENST00000396076 VAMP4O75379 141 aa30.24■■■□□ 2.43
LDHB-203ENST00000396076 BCAR3O75815 825 aa30.24■■■□□ 2.43
LDHB-203ENST00000396076 EXOC5O00471 708 aa30.23■■■□□ 2.43
LDHB-203ENST00000396076 FKBP8Q14318 412 aa30.23■■■□□ 2.43
LDHB-203ENST00000396076 TWISTNBQ3B726 338 aaPredicted RBP30.22■■■□□ 2.43
LDHB-203ENST00000396076 ZNF428Q96B54 188 aa30.22■■■□□ 2.43
LDHB-203ENST00000396076 AFF2P51816 1311 aa30.22■■■□□ 2.43
LDHB-203ENST00000396076 BTBD11A6QL63 1104 aa30.22■■■□□ 2.43
LDHB-203ENST00000396076 ELL2O00472 640 aaPredicted RBP30.22■■■□□ 2.43
LDHB-203ENST00000396076 SLC52A2Q9HAB3 445 aa30.22■■■□□ 2.43
LDHB-203ENST00000396076 IRX6P78412 446 aaPredicted RBP30.21■■■□□ 2.43
LDHB-203ENST00000396076 KRT24Q2M2I5 525 aa30.2■■■□□ 2.42
LDHB-203ENST00000396076 SHANK3Q9BYB0 1731 aa30.19■■■□□ 2.42
LDHB-203ENST00000396076 PLIN1O60240 522 aa30.18■■■□□ 2.42
LDHB-203ENST00000396076 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms