RNA–Protein interactions for RNA: ENST00000395972.2

RAB5CP1-201, Transcript of RAB5C, member RAS oncogene family pseudogene 1, humanhuman

BASIC

Gene RAB5CP1, Length 580 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP1-201ENST00000395972 LHX8Q68G74 356 aa10.11□□□□□ -0.79
RAB5CP1-201ENST00000395972 DDRGK1Q96HY6 314 aa10.11□□□□□ -0.79
RAB5CP1-201ENST00000395972 CROCC2H7BZ55 1655 aa10.11□□□□□ -0.79
RAB5CP1-201ENST00000395972 WAPLQ7Z5K2 1190 aa10.1□□□□□ -0.79
RAB5CP1-201ENST00000395972 SPDYE16A6NNV3 312 aaPredicted RBP10.09□□□□□ -0.79
RAB5CP1-201ENST00000395972 MLLT3P42568 568 aaPredicted RBP10.09□□□□□ -0.79
RAB5CP1-201ENST00000395972 TCP11L2Q8N4U5 519 aa10.09□□□□□ -0.79
RAB5CP1-201ENST00000395972 ABCA3Q99758 1704 aa10.09□□□□□ -0.79
RAB5CP1-201ENST00000395972 PMFBP1Q8TBY8 1022 aa10.08□□□□□ -0.8
RAB5CP1-201ENST00000395972 STK26Q9P289 416 aa10.08□□□□□ -0.8
RAB5CP1-201ENST00000395972 OVOS2A0A0G2JMS6 1433 aa10.07□□□□□ -0.8
RAB5CP1-201ENST00000395972 OVOS2A0A0J9YW53 1432 aa10.07□□□□□ -0.8
RAB5CP1-201ENST00000395972 OVOS2Q6IE36 1432 aa10.07□□□□□ -0.8
RAB5CP1-201ENST00000395972 MLLT1Q03111 559 aaPredicted RBP10.07□□□□□ -0.8
RAB5CP1-201ENST00000395972 DAPK1P53355 1430 aa10.07□□□□□ -0.8
RAB5CP1-201ENST00000395972 KIF1AQ12756 1690 aa10.06□□□□□ -0.8
RAB5CP1-201ENST00000395972 MKRN3Q13064 507 aaKnown RBP10.06□□□□□ -0.8
RAB5CP1-201ENST00000395972 LARP1Q6PKG0 1096 aaKnown RBP10.06□□□□□ -0.8
RAB5CP1-201ENST00000395972 MS4A4AQ96JQ5 239 aa10.06□□□□□ -0.8
RAB5CP1-201ENST00000395972 WDR90Q96KV7 1748 aa10.06□□□□□ -0.8
RAB5CP1-201ENST00000395972 IQGAP3Q86VI3 1631 aa10.06□□□□□ -0.8
RAB5CP1-201ENST00000395972 DHX57Q6P158 1386 aaKnown RBP10.05□□□□□ -0.8
RAB5CP1-201ENST00000395972 KIAA0232Q92628 1395 aa10.05□□□□□ -0.8
RAB5CP1-201ENST00000395972 ZNF316A6NFI3 1004 aaPredicted RBP10.05□□□□□ -0.8
RAB5CP1-201ENST00000395972 POTEIP0CG38 1075 aa10.05□□□□□ -0.8
RAB5CP1-201ENST00000395972 NPM2Q86SE8 214 aaKnown RBP10.05□□□□□ -0.8
RAB5CP1-201ENST00000395972 ARID3AQ99856 593 aa10.05□□□□□ -0.8
RAB5CP1-201ENST00000395972 RGPD3A6NKT7 1758 aaPredicted RBP10.04□□□□□ -0.8
RAB5CP1-201ENST00000395972 RGPD4Q7Z3J3 1758 aa10.04□□□□□ -0.8
RAB5CP1-201ENST00000395972 ZC3H6P61129 1189 aaKnown RBP10.04□□□□□ -0.8
RAB5CP1-201ENST00000395972 C16orf71Q8IYS4 520 aaPredicted RBP10.04□□□□□ -0.8
RAB5CP1-201ENST00000395972 PRAG1Q86YV5 1406 aa10.04□□□□□ -0.8
RAB5CP1-201ENST00000395972 MINK1Q8N4C8 1332 aaPredicted RBP10.04□□□□□ -0.8
RAB5CP1-201ENST00000395972 MAP3K13O43283 966 aa10.03□□□□□ -0.8
RAB5CP1-201ENST00000395972 PDIA6Q15084 440 aa10.03□□□□□ -0.8
RAB5CP1-201ENST00000395972 ZNF827Q17R98 1081 aa10.03□□□□□ -0.8
RAB5CP1-201ENST00000395972 PPP1R15BQ5SWA1 713 aa10.03□□□□□ -0.8
RAB5CP1-201ENST00000395972 RBM46Q8TBY0 533 aaKnown RBP10.03□□□□□ -0.8
RAB5CP1-201ENST00000395972 KIF12Q96FN5 646 aa10.03□□□□□ -0.8
RAB5CP1-201ENST00000395972 DCBLD2Q96PD2 775 aa10.03□□□□□ -0.8
RAB5CP1-201ENST00000395972 FAM117AQ9C073 453 aa10.03□□□□□ -0.8
RAB5CP1-201ENST00000395972 NMRK2Q9NPI5 230 aa10.03□□□□□ -0.8
RAB5CP1-201ENST00000395972 ANKRD50Q9ULJ7 1429 aa10.03□□□□□ -0.8
RAB5CP1-201ENST00000395972 SSH2Q76I76 1423 aa10.02□□□□□ -0.81
RAB5CP1-201ENST00000395972 GOLGA2Q08379 1002 aa10.02□□□□□ -0.81
RAB5CP1-201ENST00000395972 DDB1Q16531 1140 aa10.02□□□□□ -0.81
RAB5CP1-201ENST00000395972 SLC16A10Q8TF71 515 aa10.02□□□□□ -0.81
RAB5CP1-201ENST00000395972 C1orf115Q9H7X2 142 aa10.02□□□□□ -0.81
RAB5CP1-201ENST00000395972 GOPCQ9HD26 462 aa10.02□□□□□ -0.81
RAB5CP1-201ENST00000395972 PCNTO95613 3336 aa10.02□□□□□ -0.81
RAB5CP1-201ENST00000395972 PLEKHH1Q9ULM0 1364 aa10.01□□□□□ -0.81
RAB5CP1-201ENST00000395972 CLCN6P51797 869 aa10.01□□□□□ -0.81
RAB5CP1-201ENST00000395972 THRAP3Q9Y2W1 955 aaKnown RBP10.01□□□□□ -0.81
RAB5CP1-201ENST00000395972 NRXN1Q9ULB1 1477 aa10.01□□□□□ -0.81
RAB5CP1-201ENST00000395972 E9PCH4 1651 aa10.01□□□□□ -0.81
RAB5CP1-201ENST00000395972 ZBTB7CA1YPR0 619 aa10□□□□□ -0.81
RAB5CP1-201ENST00000395972 APBB1O00213 710 aa10□□□□□ -0.81
RAB5CP1-201ENST00000395972 FSTL1Q12841 308 aa10□□□□□ -0.81
RAB5CP1-201ENST00000395972 AMHR2Q16671 573 aa10□□□□□ -0.81
RAB5CP1-201ENST00000395972 USP19O94966 1318 aa10□□□□□ -0.81
RAB5CP1-201ENST00000395972 GPRASP1Q5JY77 1395 aa10□□□□□ -0.81
RAB5CP1-201ENST00000395972 PDIA4P13667 645 aaKnown RBP9.99□□□□□ -0.81
RAB5CP1-201ENST00000395972 MAP2K5Q13163 448 aa9.99□□□□□ -0.81
RAB5CP1-201ENST00000395972 GPHNQ9NQX3 736 aaPredicted RBP9.99□□□□□ -0.81
RAB5CP1-201ENST00000395972 GPR37O15354 613 aa9.98□□□□□ -0.81
RAB5CP1-201ENST00000395972 KANK4Q5T7N3 995 aaPredicted RBP9.98□□□□□ -0.81
RAB5CP1-201ENST00000395972 MARCH10Q8NA82 808 aaPredicted RBP9.98□□□□□ -0.81
RAB5CP1-201ENST00000395972 ABHD8Q96I13 439 aa9.98□□□□□ -0.81
RAB5CP1-201ENST00000395972 FMN2Q9NZ56 1722 aa9.98□□□□□ -0.81
RAB5CP1-201ENST00000395972 ATP7BP35670 1465 aa9.98□□□□□ -0.81
RAB5CP1-201ENST00000395972 PLEKHG3A1L390 1219 aa9.97□□□□□ -0.81
RAB5CP1-201ENST00000395972 A6NJR5 290 aa9.97□□□□□ -0.81
RAB5CP1-201ENST00000395972 PEAK1Q9H792 1746 aa9.96□□□□□ -0.81
RAB5CP1-201ENST00000395972 CCDC85CA6NKD9 419 aa9.96□□□□□ -0.82
RAB5CP1-201ENST00000395972 DPYSL4O14531 572 aa9.96□□□□□ -0.82
RAB5CP1-201ENST00000395972 NUTM2GQ5VZR2 741 aa9.96□□□□□ -0.82
RAB5CP1-201ENST00000395972 PRDM10Q9NQV6 1147 aa9.95□□□□□ -0.82
RAB5CP1-201ENST00000395972 TFCP2L1Q9NZI6 479 aa9.95□□□□□ -0.82
RAB5CP1-201ENST00000395972 PNPLA7Q6ZV29 1317 aa9.95□□□□□ -0.82
RAB5CP1-201ENST00000395972 NUP155O75694 1391 aa9.95□□□□□ -0.82
RAB5CP1-201ENST00000395972 TULP4Q9NRJ4 1543 aa9.95□□□□□ -0.82
RAB5CP1-201ENST00000395972 TOPAZ1Q8N9V7 1692 aa9.94□□□□□ -0.82
RAB5CP1-201ENST00000395972 ACIN1Q9UKV3 1341 aaKnown RBP9.94□□□□□ -0.82
RAB5CP1-201ENST00000395972 FOXN1O15353 648 aa9.94□□□□□ -0.82
RAB5CP1-201ENST00000395972 GALR2O43603 387 aaPredicted RBP9.94□□□□□ -0.82
RAB5CP1-201ENST00000395972 TMEM132EQ6IEE7 984 aa9.94□□□□□ -0.82
RAB5CP1-201ENST00000395972 CCDC102AQ96A19 550 aa9.94□□□□□ -0.82
RAB5CP1-201ENST00000395972 CD2APQ9Y5K6 639 aa9.94□□□□□ -0.82
RAB5CP1-201ENST00000395972 SAFB2Q14151 953 aaKnown RBP eCLIP9.93□□□□□ -0.82
RAB5CP1-201ENST00000395972 MSL1Q68DK7 614 aa9.93□□□□□ -0.82
RAB5CP1-201ENST00000395972 PARP9Q8IXQ6 854 aa9.93□□□□□ -0.82
RAB5CP1-201ENST00000395972 ACSBG1Q96GR2 724 aa9.93□□□□□ -0.82
RAB5CP1-201ENST00000395972 PHF12Q96QT6 1004 aa9.93□□□□□ -0.82
RAB5CP1-201ENST00000395972 HIRIP3Q9BW71 556 aaPredicted RBP9.93□□□□□ -0.82
RAB5CP1-201ENST00000395972 LRRC4BQ9NT99 713 aa9.93□□□□□ -0.82
RAB5CP1-201ENST00000395972 PARP4Q9UKK3 1724 aaKnown RBP9.93□□□□□ -0.82
RAB5CP1-201ENST00000395972 IRF6O14896 467 aa9.92□□□□□ -0.82
RAB5CP1-201ENST00000395972 NGDNQ8NEJ9 315 aaKnown RBP9.92□□□□□ -0.82
RAB5CP1-201ENST00000395972 EMILIN3Q9NT22 766 aa9.92□□□□□ -0.82
RAB5CP1-201ENST00000395972 ARHGEF28Q8N1W1 1705 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms