RNA–Protein interactions for RNA: ENST00000395713.6

TRPS1-202, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 3

Gene TRPS1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-202ENST00000395713 GDF9O60383 454 aa8.56□□□□□ -1.04
TRPS1-202ENST00000395713 ATP1A2P50993 1020 aa8.56□□□□□ -1.04
TRPS1-202ENST00000395713 PDE4CQ08493 712 aa8.56□□□□□ -1.04
TRPS1-202ENST00000395713 SNIP1Q8TAD8 396 aaKnown RBP8.56□□□□□ -1.04
TRPS1-202ENST00000395713 STK32AQ8WU08 396 aa8.56□□□□□ -1.04
TRPS1-202ENST00000395713 ZNF594Q96JF6 807 aaPredicted RBP8.56□□□□□ -1.04
TRPS1-202ENST00000395713 KIAA1024Q9UPX6 916 aa8.56□□□□□ -1.04
TRPS1-202ENST00000395713 USTQ9Y2C2 406 aa8.56□□□□□ -1.04
TRPS1-202ENST00000395713 PCDHGA11Q9Y5H2 935 aa8.56□□□□□ -1.04
TRPS1-202ENST00000395713 TMEM88BA6NKF7 163 aa8.55□□□□□ -1.04
TRPS1-202ENST00000395713 MYCP01106 439 aaPredicted RBP8.55□□□□□ -1.04
TRPS1-202ENST00000395713 PPP1R26Q5T8A7 1209 aaPredicted RBP8.55□□□□□ -1.04
TRPS1-202ENST00000395713 TMEM164Q5U3C3 297 aa8.55□□□□□ -1.04
TRPS1-202ENST00000395713 ANKMY2Q8IV38 441 aa8.55□□□□□ -1.04
TRPS1-202ENST00000395713 ZNF784Q8NCA9 323 aaPredicted RBP8.55□□□□□ -1.04
TRPS1-202ENST00000395713 CYLDQ9NQC7 956 aa8.55□□□□□ -1.04
TRPS1-202ENST00000395713 TNFRSF10AO00220 468 aa8.54□□□□□ -1.04
TRPS1-202ENST00000395713 ERVK-9P63128 1117 aa8.54□□□□□ -1.04
TRPS1-202ENST00000395713 DPYDQ12882 1025 aa8.54□□□□□ -1.04
TRPS1-202ENST00000395713 NNTQ13423 1086 aa8.54□□□□□ -1.04
TRPS1-202ENST00000395713 CC2D2BQ6DHV5 1058 aa8.54□□□□□ -1.04
TRPS1-202ENST00000395713 LARGE2Q8N3Y3 721 aa8.54□□□□□ -1.04
TRPS1-202ENST00000395713 FAM200AQ8TCP9 573 aa8.54□□□□□ -1.04
TRPS1-202ENST00000395713 WASF2Q9Y6W5 498 aa8.54□□□□□ -1.04
TRPS1-202ENST00000395713 TTC24A2A3L6 582 aaPredicted RBP8.53□□□□□ -1.04
TRPS1-202ENST00000395713 J3QL48 77 aa8.53□□□□□ -1.04
TRPS1-202ENST00000395713 DKK1O94907 266 aa8.53□□□□□ -1.04
TRPS1-202ENST00000395713 CYP4X1Q8N118 509 aa8.53□□□□□ -1.04
TRPS1-202ENST00000395713 ESF1Q9H501 851 aaKnown RBP8.53□□□□□ -1.04
TRPS1-202ENST00000395713 LILRA1O75019 489 aa8.52□□□□□ -1.05
TRPS1-202ENST00000395713 MYT1Q01538 1121 aa8.52□□□□□ -1.05
TRPS1-202ENST00000395713 PSME1Q06323 249 aa8.52□□□□□ -1.05
TRPS1-202ENST00000395713 CCDC102BQ68D86 513 aa8.52□□□□□ -1.05
TRPS1-202ENST00000395713 TRIM67Q6ZTA4 783 aa8.52□□□□□ -1.05
TRPS1-202ENST00000395713 SIX5Q8N196 739 aa8.52□□□□□ -1.05
TRPS1-202ENST00000395713 OSBPL3Q9H4L5 887 aa8.52□□□□□ -1.05
TRPS1-202ENST00000395713 ADD1P35611 737 aaKnown RBP8.51□□□□□ -1.05
TRPS1-202ENST00000395713 TPCN2Q8NHX9 752 aa8.51□□□□□ -1.05
TRPS1-202ENST00000395713 TOR4AQ9NXH8 423 aa8.51□□□□□ -1.05
TRPS1-202ENST00000395713 PGPEP1Q9NXJ5 209 aa8.51□□□□□ -1.05
TRPS1-202ENST00000395713 EMILIN1Q9Y6C2 1016 aa8.51□□□□□ -1.05
TRPS1-202ENST00000395713 SFI1A8K8P3 1242 aa8.5□□□□□ -1.05
TRPS1-202ENST00000395713 TRIM26Q12899 539 aaPredicted RBP8.5□□□□□ -1.05
TRPS1-202ENST00000395713 TRIM52Q96A61 297 aa8.5□□□□□ -1.05
TRPS1-202ENST00000395713 RBM19Q9Y4C8 960 aaKnown RBP8.5□□□□□ -1.05
TRPS1-202ENST00000395713 STAU1O95793 577 aaKnown RBP8.49□□□□□ -1.05
TRPS1-202ENST00000395713 SMPD1P17405 629 aa8.49□□□□□ -1.05
TRPS1-202ENST00000395713 SEC13P55735 322 aa8.49□□□□□ -1.05
TRPS1-202ENST00000395713 PRR20EP86478 221 aa8.49□□□□□ -1.05
TRPS1-202ENST00000395713 PRR20CP86479 221 aa8.49□□□□□ -1.05
TRPS1-202ENST00000395713 PRR20DP86480 221 aa8.49□□□□□ -1.05
TRPS1-202ENST00000395713 PRR20BP86481 221 aa8.49□□□□□ -1.05
TRPS1-202ENST00000395713 PRR20AP86496 221 aa8.49□□□□□ -1.05
TRPS1-202ENST00000395713 FAM69CQ0P6D2 419 aa8.49□□□□□ -1.05
TRPS1-202ENST00000395713 AEBP1Q8IUX7 1158 aa8.49□□□□□ -1.05
TRPS1-202ENST00000395713 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.48□□□□□ -1.05
TRPS1-202ENST00000395713 CBLBQ13191 982 aa8.47□□□□□ -1.05
TRPS1-202ENST00000395713 ITPKCQ96DU7 683 aa8.47□□□□□ -1.05
TRPS1-202ENST00000395713 KLF16Q9BXK1 252 aaPredicted RBP8.47□□□□□ -1.05
TRPS1-202ENST00000395713 SLAIN2Q9P270 581 aa8.47□□□□□ -1.05
TRPS1-202ENST00000395713 TMEM229AB2RXF0 380 aa8.46□□□□□ -1.06
TRPS1-202ENST00000395713 ZIC2O95409 532 aaPredicted RBP8.46□□□□□ -1.06
TRPS1-202ENST00000395713 WDR4P57081 412 aaKnown RBP8.46□□□□□ -1.06
TRPS1-202ENST00000395713 CYP2U1Q7Z449 544 aa8.46□□□□□ -1.06
TRPS1-202ENST00000395713 KCTD17Q8N5Z5 321 aa8.46□□□□□ -1.06
TRPS1-202ENST00000395713 ZFAND3Q9H8U3 227 aa8.46□□□□□ -1.06
TRPS1-202ENST00000395713 ZNF358Q9NW07 568 aa8.46□□□□□ -1.06
TRPS1-202ENST00000395713 LGR5O75473 907 aa8.45□□□□□ -1.06
TRPS1-202ENST00000395713 RGS20O76081 388 aa8.45□□□□□ -1.06
TRPS1-202ENST00000395713 BRD1O95696 1058 aa8.45□□□□□ -1.06
TRPS1-202ENST00000395713 SCNN1DP51172 638 aa8.45□□□□□ -1.06
TRPS1-202ENST00000395713 GDF10P55107 478 aa8.45□□□□□ -1.06
TRPS1-202ENST00000395713 HPS1Q92902 700 aa8.45□□□□□ -1.06
TRPS1-202ENST00000395713 CLP1Q92989 425 aaKnown RBP8.45□□□□□ -1.06
TRPS1-202ENST00000395713 ETNK1Q9HBU6 452 aa8.45□□□□□ -1.06
TRPS1-202ENST00000395713 GNRH1P01148 92 aa8.44□□□□□ -1.06
TRPS1-202ENST00000395713 TIMP2P16035 220 aa8.44□□□□□ -1.06
TRPS1-202ENST00000395713 SWI5Q1ZZU3 235 aa8.44□□□□□ -1.06
TRPS1-202ENST00000395713 TSEN2Q8NCE0 465 aaKnown RBP8.44□□□□□ -1.06
TRPS1-202ENST00000395713 HINFPQ9BQA5 517 aa8.44□□□□□ -1.06
TRPS1-202ENST00000395713 SERTAD1Q9UHV2 236 aa8.44□□□□□ -1.06
TRPS1-202ENST00000395713 ZBTB7CA1YPR0 619 aa8.43□□□□□ -1.06
TRPS1-202ENST00000395713 M0R2N6 131 aa8.43□□□□□ -1.06
TRPS1-202ENST00000395713 INHAP05111 366 aa8.43□□□□□ -1.06
TRPS1-202ENST00000395713 ADH1AP07327 375 aa8.43□□□□□ -1.06
TRPS1-202ENST00000395713 Q6ZVU0 165 aa8.43□□□□□ -1.06
TRPS1-202ENST00000395713 KDF1Q8NAX2 398 aaPredicted RBP8.43□□□□□ -1.06
TRPS1-202ENST00000395713 ARHGEF10LQ9HCE6 1279 aa8.43□□□□□ -1.06
TRPS1-202ENST00000395713 RAB6BQ9NRW1 208 aa8.43□□□□□ -1.06
TRPS1-202ENST00000395713 PDZRN3Q9UPQ7 1066 aa8.43□□□□□ -1.06
TRPS1-202ENST00000395713 AGBL1Q96MI9 1066 aa8.42□□□□□ -1.06
TRPS1-202ENST00000395713 WASLO00401 505 aaPredicted RBP8.41□□□□□ -1.06
TRPS1-202ENST00000395713 BACH1O14867 736 aa8.41□□□□□ -1.06
TRPS1-202ENST00000395713 PRMT3O60678 531 aa8.41□□□□□ -1.06
TRPS1-202ENST00000395713 SSFA2P28290 1259 aa8.41□□□□□ -1.06
TRPS1-202ENST00000395713 PHLDB3Q6NSJ2 640 aa8.41□□□□□ -1.06
TRPS1-202ENST00000395713 PRIMPOLQ96LW4 560 aa8.41□□□□□ -1.06
TRPS1-202ENST00000395713 IL2RAP01589 272 aa8.4□□□□□ -1.06
TRPS1-202ENST00000395713 ATP2B4P23634 1241 aa8.4□□□□□ -1.06
TRPS1-202ENST00000395713 PTGIRP43119 386 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms