RNA–Protein interactions for RNA: ENST00000395671.9

TRIM16L-201, Transcript of tripartite motif containing 16 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM16L, Length 1,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16L-201ENST00000395671 FMN2Q9NZ56 1722 aa12.28□□□□□ -0.44
TRIM16L-201ENST00000395671 CHMP4AQ9BY43 222 aa12.28□□□□□ -0.44
TRIM16L-201ENST00000395671 CHMP4BQ9H444 224 aaKnown RBP12.28□□□□□ -0.44
TRIM16L-201ENST00000395671 ZNF142P52746 1687 aaPredicted RBP12.28□□□□□ -0.44
TRIM16L-201ENST00000395671 KDM4FA0A1W2PPD8 638 aa12.27□□□□□ -0.44
TRIM16L-201ENST00000395671 VAMP4O75379 141 aa12.27□□□□□ -0.44
TRIM16L-201ENST00000395671 XRCC6P12956 609 aaKnown RBP eCLIP12.27□□□□□ -0.44
TRIM16L-201ENST00000395671 ADRA2BP18089 450 aa12.27□□□□□ -0.44
TRIM16L-201ENST00000395671 MBIPQ9NS73 344 aa12.27□□□□□ -0.44
TRIM16L-201ENST00000395671 TMEM57Q8N5G2 664 aa12.27□□□□□ -0.45
TRIM16L-201ENST00000395671 NGDNQ8NEJ9 315 aaKnown RBP12.27□□□□□ -0.45
TRIM16L-201ENST00000395671 THUMPD2Q9BTF0 503 aaKnown RBP12.27□□□□□ -0.45
TRIM16L-201ENST00000395671 PDZRN3Q9UPQ7 1066 aa12.27□□□□□ -0.45
TRIM16L-201ENST00000395671 SBNO1A3KN83 1393 aa12.27□□□□□ -0.45
TRIM16L-201ENST00000395671 ARHGEF10O15013 1369 aa12.27□□□□□ -0.45
TRIM16L-201ENST00000395671 USP54Q70EL1 1684 aa12.27□□□□□ -0.45
TRIM16L-201ENST00000395671 RGPD8O14715 1765 aaPredicted RBP12.27□□□□□ -0.45
TRIM16L-201ENST00000395671 PIK3C2AO00443 1686 aa12.26□□□□□ -0.45
TRIM16L-201ENST00000395671 FLT4P35916 1363 aa12.26□□□□□ -0.45
TRIM16L-201ENST00000395671 ESPNB1AK53 854 aa12.26□□□□□ -0.45
TRIM16L-201ENST00000395671 SULT6B1Q6IMI4 303 aa12.26□□□□□ -0.45
TRIM16L-201ENST00000395671 ZBTB40Q9NUA8 1239 aa12.26□□□□□ -0.45
TRIM16L-201ENST00000395671 SMAP1Q8IYB5 467 aaPredicted RBP12.25□□□□□ -0.45
TRIM16L-201ENST00000395671 KIF24Q5T7B8 1368 aa12.25□□□□□ -0.45
TRIM16L-201ENST00000395671 TWISTNBQ3B726 338 aaPredicted RBP12.25□□□□□ -0.45
TRIM16L-201ENST00000395671 MRPL50Q8N5N7 158 aaKnown RBP12.25□□□□□ -0.45
TRIM16L-201ENST00000395671 KCNA6P17658 529 aa12.24□□□□□ -0.45
TRIM16L-201ENST00000395671 CDK11BP21127 795 aaKnown RBP12.24□□□□□ -0.45
TRIM16L-201ENST00000395671 HSP90AB2PQ58FF8 381 aa12.24□□□□□ -0.45
TRIM16L-201ENST00000395671 MAP3K19Q56UN5 1328 aa12.24□□□□□ -0.45
TRIM16L-201ENST00000395671 AEBP1Q8IUX7 1158 aa12.23□□□□□ -0.45
TRIM16L-201ENST00000395671 CHD2O14647 1828 aaKnown RBP12.23□□□□□ -0.45
TRIM16L-201ENST00000395671 SLC4A3P48751 1232 aa12.23□□□□□ -0.45
TRIM16L-201ENST00000395671 SMC5Q8IY18 1101 aa12.23□□□□□ -0.45
TRIM16L-201ENST00000395671 TSPYL6Q8N831 410 aa12.23□□□□□ -0.45
TRIM16L-201ENST00000395671 KDRP35968 1356 aa12.22□□□□□ -0.45
TRIM16L-201ENST00000395671 FAM83GA6ND36 823 aa12.22□□□□□ -0.45
TRIM16L-201ENST00000395671 PTMSP20962 102 aa12.22□□□□□ -0.45
TRIM16L-201ENST00000395671 SAMD1Q6SPF0 538 aaPredicted RBP12.22□□□□□ -0.45
TRIM16L-201ENST00000395671 ANKLE2Q86XL3 938 aa12.22□□□□□ -0.45
TRIM16L-201ENST00000395671 ABCC4O15439 1325 aa12.22□□□□□ -0.45
TRIM16L-201ENST00000395671 KIAA0232Q92628 1395 aa12.22□□□□□ -0.45
TRIM16L-201ENST00000395671 API5Q9BZZ5 524 aaKnown RBP12.21□□□□□ -0.45
TRIM16L-201ENST00000395671 ADAMTSL3P82987 1691 aa12.21□□□□□ -0.45
TRIM16L-201ENST00000395671 UTP14CQ5TAP6 766 aaKnown RBP12.21□□□□□ -0.46
TRIM16L-201ENST00000395671 C8orf58Q8NAV2 365 aa12.21□□□□□ -0.46
TRIM16L-201ENST00000395671 MARF1Q9Y4F3 1742 aaKnown RBP12.21□□□□□ -0.46
TRIM16L-201ENST00000395671 CHL1O00533 1208 aa12.2□□□□□ -0.46
TRIM16L-201ENST00000395671 AMPHP49418 695 aa12.2□□□□□ -0.46
TRIM16L-201ENST00000395671 ANTXR1Q9H6X2 564 aa12.2□□□□□ -0.46
TRIM16L-201ENST00000395671 UPF2Q9HAU5 1272 aaKnown RBP12.2□□□□□ -0.46
TRIM16L-201ENST00000395671 IGSF1Q8N6C5 1336 aa12.2□□□□□ -0.46
TRIM16L-201ENST00000395671 ZBTB7BO15156 539 aaPredicted RBP12.19□□□□□ -0.46
TRIM16L-201ENST00000395671 HMGB1P09429 215 aaKnown RBP12.19□□□□□ -0.46
TRIM16L-201ENST00000395671 PDE4CQ08493 712 aa12.19□□□□□ -0.46
TRIM16L-201ENST00000395671 DCTN1Q14203 1278 aa12.19□□□□□ -0.46
TRIM16L-201ENST00000395671 ELL2O00472 640 aaPredicted RBP12.19□□□□□ -0.46
TRIM16L-201ENST00000395671 SOX12O15370 315 aa12.19□□□□□ -0.46
TRIM16L-201ENST00000395671 NLRP6P59044 892 aa12.19□□□□□ -0.46
TRIM16L-201ENST00000395671 USP19O94966 1318 aa12.19□□□□□ -0.46
TRIM16L-201ENST00000395671 RTL1A6NKG5 1358 aa12.18□□□□□ -0.46
TRIM16L-201ENST00000395671 CRB1P82279 1406 aa12.18□□□□□ -0.46
TRIM16L-201ENST00000395671 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.18□□□□□ -0.46
TRIM16L-201ENST00000395671 TRIM44Q96DX7 344 aaPredicted RBP12.18□□□□□ -0.46
TRIM16L-201ENST00000395671 GAS2L2Q8NHY3 880 aa12.18□□□□□ -0.46
TRIM16L-201ENST00000395671 ADGRL3Q9HAR2 1447 aa12.17□□□□□ -0.46
TRIM16L-201ENST00000395671 MCM4P33991 863 aa12.17□□□□□ -0.46
TRIM16L-201ENST00000395671 NUCB1Q02818 461 aa12.17□□□□□ -0.46
TRIM16L-201ENST00000395671 MCM10Q7L590 875 aa12.17□□□□□ -0.46
TRIM16L-201ENST00000395671 RTF1Q92541 710 aaKnown RBP12.17□□□□□ -0.46
TRIM16L-201ENST00000395671 GCC1Q96CN9 775 aa12.17□□□□□ -0.46
TRIM16L-201ENST00000395671 SETD1BQ9UPS6 1966 aaKnown RBP12.17□□□□□ -0.46
TRIM16L-201ENST00000395671 HTATSF1O43719 755 aaKnown RBP12.16□□□□□ -0.46
TRIM16L-201ENST00000395671 OFD1O75665 1012 aa12.16□□□□□ -0.46
TRIM16L-201ENST00000395671 BRD2P25440 801 aaKnown RBP12.16□□□□□ -0.46
TRIM16L-201ENST00000395671 EYA1Q99502 592 aa12.16□□□□□ -0.46
TRIM16L-201ENST00000395671 LRRC37A3O60309 1634 aa12.16□□□□□ -0.46
TRIM16L-201ENST00000395671 PTPRCP08575 1304 aa12.16□□□□□ -0.46
TRIM16L-201ENST00000395671 DDX11L8A8MPP1 907 aa12.16□□□□□ -0.46
TRIM16L-201ENST00000395671 SEC24BO95487 1268 aa12.16□□□□□ -0.46
TRIM16L-201ENST00000395671 HOXC9P31274 260 aa12.16□□□□□ -0.46
TRIM16L-201ENST00000395671 HS1BP3Q53T59 392 aa12.16□□□□□ -0.46
TRIM16L-201ENST00000395671 ABTB2Q8N961 1025 aa12.16□□□□□ -0.46
TRIM16L-201ENST00000395671 PHF8Q9UPP1 1060 aa12.16□□□□□ -0.46
TRIM16L-201ENST00000395671 MTHFSDQ2M296 383 aaKnown RBP12.15□□□□□ -0.46
TRIM16L-201ENST00000395671 GRPEL1Q9HAV7 217 aa12.15□□□□□ -0.46
TRIM16L-201ENST00000395671 INTS3Q68E01 1043 aaKnown RBP12.14□□□□□ -0.47
TRIM16L-201ENST00000395671 CHD1LQ86WJ1 897 aa12.14□□□□□ -0.47
TRIM16L-201ENST00000395671 TBC1D32Q96NH3 1257 aa12.14□□□□□ -0.47
TRIM16L-201ENST00000395671 NWD1Q149M9 1564 aa12.14□□□□□ -0.47
TRIM16L-201ENST00000395671 NPHP4O75161 1426 aaPredicted RBP12.14□□□□□ -0.47
TRIM16L-201ENST00000395671 SKOR2Q2VWA4 1001 aaPredicted RBP12.13□□□□□ -0.47
TRIM16L-201ENST00000395671 RGS12O14924 1447 aa12.13□□□□□ -0.47
TRIM16L-201ENST00000395671 LTN1O94822 1766 aa12.13□□□□□ -0.47
TRIM16L-201ENST00000395671 PHRF1Q9P1Y6 1649 aaKnown RBP12.13□□□□□ -0.47
TRIM16L-201ENST00000395671 CHMP5Q9NZZ3 219 aa12.12□□□□□ -0.47
TRIM16L-201ENST00000395671 NFAT5O94916 1531 aa12.12□□□□□ -0.47
TRIM16L-201ENST00000395671 SOS1Q07889 1333 aaPredicted RBP12.12□□□□□ -0.47
TRIM16L-201ENST00000395671 NPM3O75607 178 aaKnown RBP12.12□□□□□ -0.47
TRIM16L-201ENST00000395671 HSP90B1P14625 803 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms