RNA–Protein interactions for RNA: ENST00000395360.6

RAPGEF3-203, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 2,325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-203ENST00000395360 ELL2O00472 640 aaPredicted RBP19.65■□□□□ 0.74
RAPGEF3-203ENST00000395360 HDAC1Q13547 482 aaPredicted RBP19.65■□□□□ 0.74
RAPGEF3-203ENST00000395360 ZBTB40Q9NUA8 1239 aa19.65■□□□□ 0.74
RAPGEF3-203ENST00000395360 BRPF1P55201 1214 aaPredicted RBP19.65■□□□□ 0.74
RAPGEF3-203ENST00000395360 AEBP1Q8IUX7 1158 aa19.65■□□□□ 0.74
RAPGEF3-203ENST00000395360 DDX17Q92841 729 aaKnown RBP19.65■□□□□ 0.74
RAPGEF3-203ENST00000395360 CFAP44Q96MT7 982 aa19.65■□□□□ 0.74
RAPGEF3-203ENST00000395360 SULT6B1Q6IMI4 303 aa19.64■□□□□ 0.74
RAPGEF3-203ENST00000395360 USP19O94966 1318 aa19.64■□□□□ 0.73
RAPGEF3-203ENST00000395360 SOX12O15370 315 aa19.64■□□□□ 0.73
RAPGEF3-203ENST00000395360 XPCQ01831 940 aaPredicted RBP19.64■□□□□ 0.73
RAPGEF3-203ENST00000395360 DCTN1Q14203 1278 aa19.64■□□□□ 0.73
RAPGEF3-203ENST00000395360 TNS3Q68CZ2 1445 aa19.63■□□□□ 0.73
RAPGEF3-203ENST00000395360 USP31Q70CQ4 1352 aa19.62■□□□□ 0.73
RAPGEF3-203ENST00000395360 HSP90AB2PQ58FF8 381 aa19.62■□□□□ 0.73
RAPGEF3-203ENST00000395360 MRPL50Q8N5N7 158 aaKnown RBP19.62■□□□□ 0.73
RAPGEF3-203ENST00000395360 ALS2Q96Q42 1657 aa19.62■□□□□ 0.73
RAPGEF3-203ENST00000395360 TWISTNBQ3B726 338 aaPredicted RBP19.62■□□□□ 0.73
RAPGEF3-203ENST00000395360 PIK3C2AO00443 1686 aa19.62■□□□□ 0.73
RAPGEF3-203ENST00000395360 SPATA31A3Q5VYP0 1347 aa19.61■□□□□ 0.73
RAPGEF3-203ENST00000395360 ARHGEF10O15013 1369 aa19.61■□□□□ 0.73
RAPGEF3-203ENST00000395360 USP54Q70EL1 1684 aa19.61■□□□□ 0.73
RAPGEF3-203ENST00000395360 ABTB2Q8N961 1025 aa19.61■□□□□ 0.73
RAPGEF3-203ENST00000395360 PHLPP1O60346 1717 aa19.61■□□□□ 0.73
RAPGEF3-203ENST00000395360 DEKP35659 375 aaKnown RBP19.6■□□□□ 0.73
RAPGEF3-203ENST00000395360 C8orf58Q8NAV2 365 aa19.6■□□□□ 0.73
RAPGEF3-203ENST00000395360 LRRC59Q96AG4 307 aaKnown RBP19.59■□□□□ 0.73
RAPGEF3-203ENST00000395360 COL16A1Q07092 1604 aaPredicted RBP19.59■□□□□ 0.73
RAPGEF3-203ENST00000395360 SMC5Q8IY18 1101 aa19.59■□□□□ 0.73
RAPGEF3-203ENST00000395360 ARHGAP45Q92619 1136 aa19.59■□□□□ 0.73
RAPGEF3-203ENST00000395360 PEAK1Q9H792 1746 aa19.58■□□□□ 0.72
RAPGEF3-203ENST00000395360 NLRP6P59044 892 aa19.57■□□□□ 0.72
RAPGEF3-203ENST00000395360 ZBTB7BO15156 539 aaPredicted RBP19.56■□□□□ 0.72
RAPGEF3-203ENST00000395360 UPF2Q9HAU5 1272 aaKnown RBP19.56■□□□□ 0.72
RAPGEF3-203ENST00000395360 USP35Q9P2H5 1018 aa19.56■□□□□ 0.72
RAPGEF3-203ENST00000395360 MED1Q15648 1581 aaPredicted RBP19.56■□□□□ 0.72
RAPGEF3-203ENST00000395360 MAP3K19Q56UN5 1328 aa19.55■□□□□ 0.72
RAPGEF3-203ENST00000395360 LMOD2Q6P5Q4 547 aa19.55■□□□□ 0.72
RAPGEF3-203ENST00000395360 MCM10Q7L590 875 aa19.54■□□□□ 0.72
RAPGEF3-203ENST00000395360 MARF1Q9Y4F3 1742 aaKnown RBP19.54■□□□□ 0.72
RAPGEF3-203ENST00000395360 ABCC4O15439 1325 aa19.53■□□□□ 0.72
RAPGEF3-203ENST00000395360 CHMP4BQ9H444 224 aaKnown RBP19.53■□□□□ 0.72
RAPGEF3-203ENST00000395360 SLIT3O75094 1523 aa19.53■□□□□ 0.72
RAPGEF3-203ENST00000395360 C1orf115Q9H7X2 142 aa19.52■□□□□ 0.72
RAPGEF3-203ENST00000395360 COL22A1Q8NFW1 1626 aaPredicted RBP19.52■□□□□ 0.72
RAPGEF3-203ENST00000395360 RGPD1P0DJD0 1748 aa19.52■□□□□ 0.72
RAPGEF3-203ENST00000395360 NUTM2GQ5VZR2 741 aa19.52■□□□□ 0.71
RAPGEF3-203ENST00000395360 KCNH5Q8NCM2 988 aa19.51■□□□□ 0.71
RAPGEF3-203ENST00000395360 FLT4P35916 1363 aa19.51■□□□□ 0.71
RAPGEF3-203ENST00000395360 CHL1O00533 1208 aa19.51■□□□□ 0.71
RAPGEF3-203ENST00000395360 NUCB1Q02818 461 aa19.51■□□□□ 0.71
RAPGEF3-203ENST00000395360 FBXO41Q8TF61 875 aa19.51■□□□□ 0.71
RAPGEF3-203ENST00000395360 TBC1D32Q96NH3 1257 aa19.51■□□□□ 0.71
RAPGEF3-203ENST00000395360 AMPHP49418 695 aa19.5■□□□□ 0.71
RAPGEF3-203ENST00000395360 KRT24Q2M2I5 525 aa19.5■□□□□ 0.71
RAPGEF3-203ENST00000395360 API5Q9BZZ5 524 aaKnown RBP19.5■□□□□ 0.71
RAPGEF3-203ENST00000395360 LNPKQ9C0E8 428 aa19.5■□□□□ 0.71
RAPGEF3-203ENST00000395360 CRYBG1Q9Y4K1 1723 aa19.49■□□□□ 0.71
RAPGEF3-203ENST00000395360 JCADQ9P266 1359 aa19.49■□□□□ 0.71
RAPGEF3-203ENST00000395360 HSPA1LP34931 641 aa19.48■□□□□ 0.71
RAPGEF3-203ENST00000395360 CHD1LQ86WJ1 897 aa19.48■□□□□ 0.71
RAPGEF3-203ENST00000395360 NFKBIBQ15653 356 aa19.48■□□□□ 0.71
RAPGEF3-203ENST00000395360 PHRF1Q9P1Y6 1649 aaKnown RBP19.48■□□□□ 0.71
RAPGEF3-203ENST00000395360 BECN1Q14457 450 aa19.47■□□□□ 0.71
RAPGEF3-203ENST00000395360 HAP1P54257 671 aaPredicted RBP19.47■□□□□ 0.71
RAPGEF3-203ENST00000395360 NFAT5O94916 1531 aa19.47■□□□□ 0.71
RAPGEF3-203ENST00000395360 GCP02774 474 aa19.46■□□□□ 0.71
RAPGEF3-203ENST00000395360 MTHFSDQ2M296 383 aaKnown RBP19.46■□□□□ 0.71
RAPGEF3-203ENST00000395360 GCC1Q96CN9 775 aa19.46■□□□□ 0.71
RAPGEF3-203ENST00000395360 EYA1Q99502 592 aa19.46■□□□□ 0.71
RAPGEF3-203ENST00000395360 ABCA3Q99758 1704 aa19.45■□□□□ 0.7
RAPGEF3-203ENST00000395360 ANKRD45Q5TZF3 282 aa19.45■□□□□ 0.7
RAPGEF3-203ENST00000395360 SIRT2Q8IXJ6 389 aa19.45■□□□□ 0.7
RAPGEF3-203ENST00000395360 MFAP1P55081 439 aaKnown RBP19.45■□□□□ 0.7
RAPGEF3-203ENST00000395360 RTF1Q92541 710 aaKnown RBP19.45■□□□□ 0.7
RAPGEF3-203ENST00000395360 MIS18AQ9NYP9 233 aa19.45■□□□□ 0.7
RAPGEF3-203ENST00000395360 KDRP35968 1356 aa19.45■□□□□ 0.7
RAPGEF3-203ENST00000395360 KIAA0232Q92628 1395 aa19.45■□□□□ 0.7
RAPGEF3-203ENST00000395360 CRB1P82279 1406 aa19.44■□□□□ 0.7
RAPGEF3-203ENST00000395360 IGSF1Q8N6C5 1336 aa19.43■□□□□ 0.7
RAPGEF3-203ENST00000395360 KIF24Q5T7B8 1368 aa19.43■□□□□ 0.7
RAPGEF3-203ENST00000395360 CABLES1Q8TDN4 633 aa19.42■□□□□ 0.7
RAPGEF3-203ENST00000395360 CPDO75976 1380 aa19.42■□□□□ 0.7
RAPGEF3-203ENST00000395360 C22orf23Q9BZE7 217 aa19.42■□□□□ 0.7
RAPGEF3-203ENST00000395360 SPATA31A6Q5VVP1 1343 aa19.41■□□□□ 0.7
RAPGEF3-203ENST00000395360 RTL1A6NKG5 1358 aa19.4■□□□□ 0.7
RAPGEF3-203ENST00000395360 HOXC9P31274 260 aa19.4■□□□□ 0.7
RAPGEF3-203ENST00000395360 INTS3Q68E01 1043 aaKnown RBP19.4■□□□□ 0.7
RAPGEF3-203ENST00000395360 TSPYL4Q9UJ04 414 aa19.4■□□□□ 0.7
RAPGEF3-203ENST00000395360 ABCC6O95255 1503 aa19.4■□□□□ 0.7
RAPGEF3-203ENST00000395360 ARHGEF25Q86VW2 580 aa19.4■□□□□ 0.7
RAPGEF3-203ENST00000395360 GAS2L2Q8NHY3 880 aa19.4■□□□□ 0.7
RAPGEF3-203ENST00000395360 RGS12O14924 1447 aa19.39■□□□□ 0.69
RAPGEF3-203ENST00000395360 PLEKHG5O94827 1062 aa19.39■□□□□ 0.69
RAPGEF3-203ENST00000395360 TBC1D2Q9BYX2 928 aa19.39■□□□□ 0.69
RAPGEF3-203ENST00000395360 LTN1O94822 1766 aa19.38■□□□□ 0.69
RAPGEF3-203ENST00000395360 SLC4A2P04920 1241 aa19.38■□□□□ 0.69
RAPGEF3-203ENST00000395360 BMP2KLQ5H9B9 411 aa19.38■□□□□ 0.69
RAPGEF3-203ENST00000395360 SLKQ9H2G2 1235 aaPredicted RBP19.38■□□□□ 0.69
RAPGEF3-203ENST00000395360 PTPRCP08575 1304 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms