RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 MORC1Q86VD1 984 aa18.26■□□□□ 0.51
HLA-DMA-202ENST00000395303 MEGF6O75095 1541 aa18.26■□□□□ 0.51
HLA-DMA-202ENST00000395303 TNNT2P45379 298 aaPredicted RBP18.24■□□□□ 0.51
HLA-DMA-202ENST00000395303 PPM1GO15355 546 aaPredicted RBP18.22■□□□□ 0.51
HLA-DMA-202ENST00000395303 BTAF1O14981 1849 aa18.21■□□□□ 0.51
HLA-DMA-202ENST00000395303 EIF4A2Q14240 407 aaKnown RBP18.2■□□□□ 0.5
HLA-DMA-202ENST00000395303 USHBP1Q8N6Y0 703 aa18.2■□□□□ 0.5
HLA-DMA-202ENST00000395303 EYA1Q99502 592 aa18.2■□□□□ 0.5
HLA-DMA-202ENST00000395303 DOT1LQ8TEK3 1739 aa18.2■□□□□ 0.5
HLA-DMA-202ENST00000395303 PLEKHG2Q9H7P9 1386 aa18.19■□□□□ 0.5
HLA-DMA-202ENST00000395303 NBPF14Q5TI25 921 aa18.19■□□□□ 0.5
HLA-DMA-202ENST00000395303 ZCRB1Q8TBF4 217 aaKnown RBP18.19■□□□□ 0.5
HLA-DMA-202ENST00000395303 RAPGEF4Q8WZA2 1011 aa18.19■□□□□ 0.5
HLA-DMA-202ENST00000395303 BCL11BQ9C0K0 894 aaPredicted RBP18.19■□□□□ 0.5
HLA-DMA-202ENST00000395303 ZEB1P37275 1124 aaPredicted RBP18.18■□□□□ 0.5
HLA-DMA-202ENST00000395303 CC2D1BQ5T0F9 858 aaKnown RBP18.18■□□□□ 0.5
HLA-DMA-202ENST00000395303 PTF1AQ7RTS3 328 aa18.18■□□□□ 0.5
HLA-DMA-202ENST00000395303 IGSF1Q8N6C5 1336 aa18.18■□□□□ 0.5
HLA-DMA-202ENST00000395303 CASZ1Q86V15 1759 aa18.17■□□□□ 0.5
HLA-DMA-202ENST00000395303 ITGB4P16144 1822 aa18.17■□□□□ 0.5
HLA-DMA-202ENST00000395303 TATP17735 454 aaPredicted RBP18.17■□□□□ 0.5
HLA-DMA-202ENST00000395303 PLSCR1O15162 318 aa18.16■□□□□ 0.5
HLA-DMA-202ENST00000395303 MTHFSP49914 203 aa18.14■□□□□ 0.49
HLA-DMA-202ENST00000395303 ANO8Q9HCE9 1232 aaPredicted RBP18.14■□□□□ 0.49
HLA-DMA-202ENST00000395303 TOGARAM1Q9Y4F4 1720 aa18.13■□□□□ 0.49
HLA-DMA-202ENST00000395303 IL13P35225 146 aa18.13■□□□□ 0.49
HLA-DMA-202ENST00000395303 PROM2Q8N271 834 aa18.13■□□□□ 0.49
HLA-DMA-202ENST00000395303 DDX54Q8TDD1 881 aaKnown RBP18.13■□□□□ 0.49
HLA-DMA-202ENST00000395303 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.13■□□□□ 0.49
HLA-DMA-202ENST00000395303 PCDH11XQ9BZA7 1347 aa18.13■□□□□ 0.49
HLA-DMA-202ENST00000395303 PCDH11YQ9BZA8 1340 aa18.13■□□□□ 0.49
HLA-DMA-202ENST00000395303 COL3A1P02461 1466 aaPredicted RBP18.13■□□□□ 0.49
HLA-DMA-202ENST00000395303 LY75O60449 1722 aa18.12■□□□□ 0.49
HLA-DMA-202ENST00000395303 VIRMAQ69YN4 1812 aaKnown RBP18.12■□□□□ 0.49
HLA-DMA-202ENST00000395303 KCNQ2O43526 872 aa18.12■□□□□ 0.49
HLA-DMA-202ENST00000395303 SPON1Q9HCB6 807 aa18.12■□□□□ 0.49
HLA-DMA-202ENST00000395303 KDRP35968 1356 aa18.11■□□□□ 0.49
HLA-DMA-202ENST00000395303 ACSBG1Q96GR2 724 aa18.1■□□□□ 0.49
HLA-DMA-202ENST00000395303 CYP27B1O15528 508 aa18.09■□□□□ 0.49
HLA-DMA-202ENST00000395303 NKX1-1Q15270 411 aaPredicted RBP18.08■□□□□ 0.48
HLA-DMA-202ENST00000395303 PDGFDQ9GZP0 370 aaPredicted RBP18.08■□□□□ 0.48
HLA-DMA-202ENST00000395303 SPG7Q9UQ90 795 aa18.08■□□□□ 0.48
HLA-DMA-202ENST00000395303 PAPPAQ13219 1627 aa18.06■□□□□ 0.48
HLA-DMA-202ENST00000395303 PPP1R1BQ9UD71 204 aaPredicted RBP18.06■□□□□ 0.48
HLA-DMA-202ENST00000395303 SCN11AQ9UI33 1791 aa18.05■□□□□ 0.48
HLA-DMA-202ENST00000395303 DIAPH1O60610 1272 aaKnown RBP18.05■□□□□ 0.48
HLA-DMA-202ENST00000395303 TXNRD1Q16881 649 aa18.05■□□□□ 0.48
HLA-DMA-202ENST00000395303 AEBP1Q8IUX7 1158 aa18.05■□□□□ 0.48
HLA-DMA-202ENST00000395303 PRIM1P49642 420 aaKnown RBP18.04■□□□□ 0.48
HLA-DMA-202ENST00000395303 IFNL2Q8IZJ0 200 aa18.04■□□□□ 0.48
HLA-DMA-202ENST00000395303 TAF1LQ8IZX4 1826 aa18.04■□□□□ 0.48
HLA-DMA-202ENST00000395303 PHKG2P15735 406 aa18.03■□□□□ 0.48
HLA-DMA-202ENST00000395303 PPP2R1AP30153 589 aa18.03■□□□□ 0.48
HLA-DMA-202ENST00000395303 AMOTQ4VCS5 1084 aa18.03■□□□□ 0.48
HLA-DMA-202ENST00000395303 SULT6B1Q6IMI4 303 aa18.03■□□□□ 0.48
HLA-DMA-202ENST00000395303 QSER1Q2KHR3 1735 aa18.03■□□□□ 0.48
HLA-DMA-202ENST00000395303 YY1P25490 414 aa18.02■□□□□ 0.48
HLA-DMA-202ENST00000395303 PTGER2P43116 358 aa18.02■□□□□ 0.48
HLA-DMA-202ENST00000395303 CNGB1Q14028 1251 aaPredicted RBP18.02■□□□□ 0.48
HLA-DMA-202ENST00000395303 PLEKHO1Q53GL0 409 aaPredicted RBP18.02■□□□□ 0.48
HLA-DMA-202ENST00000395303 ZBTB7AO95365 584 aa18■□□□□ 0.47
HLA-DMA-202ENST00000395303 DDX10Q13206 875 aaKnown RBP18■□□□□ 0.47
HLA-DMA-202ENST00000395303 SLC15A2Q16348 729 aa18■□□□□ 0.47
HLA-DMA-202ENST00000395303 TUBGCP6Q96RT7 1819 aa18■□□□□ 0.47
HLA-DMA-202ENST00000395303 ADAMTS7Q9UKP4 1686 aa17.99■□□□□ 0.47
HLA-DMA-202ENST00000395303 SYTL4Q96C24 671 aaPredicted RBP17.99■□□□□ 0.47
HLA-DMA-202ENST00000395303 STK32BQ9NY57 414 aa17.99■□□□□ 0.47
HLA-DMA-202ENST00000395303 CFAP53Q96M91 514 aa17.98■□□□□ 0.47
HLA-DMA-202ENST00000395303 HSP90AB1P08238 724 aaKnown RBP17.97■□□□□ 0.47
HLA-DMA-202ENST00000395303 SLC27A3Q5K4L6 730 aa17.97■□□□□ 0.47
HLA-DMA-202ENST00000395303 ZNF530Q6P9A1 599 aaPredicted RBP17.97■□□□□ 0.47
HLA-DMA-202ENST00000395303 KDM6AO15550 1401 aaPredicted RBP17.97■□□□□ 0.47
HLA-DMA-202ENST00000395303 C5P01031 1676 aa17.96■□□□□ 0.47
HLA-DMA-202ENST00000395303 ZNF831Q5JPB2 1677 aa17.96■□□□□ 0.47
HLA-DMA-202ENST00000395303 HMOX1P09601 288 aa17.96■□□□□ 0.47
HLA-DMA-202ENST00000395303 SGIP1Q9BQI5 828 aa17.96■□□□□ 0.47
HLA-DMA-202ENST00000395303 LRRC4BQ9NT99 713 aa17.96■□□□□ 0.47
HLA-DMA-202ENST00000395303 ATF5Q9Y2D1 282 aaPredicted RBP17.96■□□□□ 0.47
HLA-DMA-202ENST00000395303 RALBP1Q15311 655 aa17.95■□□□□ 0.46
HLA-DMA-202ENST00000395303 DCAF5Q96JK2 942 aa17.95■□□□□ 0.46
HLA-DMA-202ENST00000395303 ERVV-2B6SEH9 535 aa17.94■□□□□ 0.46
HLA-DMA-202ENST00000395303 MPRIPQ6WCQ1 1025 aa17.94■□□□□ 0.46
HLA-DMA-202ENST00000395303 PIGBQ92521 554 aa17.94■□□□□ 0.46
HLA-DMA-202ENST00000395303 C1orf141Q5JVX7 400 aa17.93■□□□□ 0.46
HLA-DMA-202ENST00000395303 MTFR1LQ9H019 292 aa17.93■□□□□ 0.46
HLA-DMA-202ENST00000395303 NUDCQ9Y266 331 aa17.93■□□□□ 0.46
HLA-DMA-202ENST00000395303 DCAF8L1A6NGE4 600 aa17.92■□□□□ 0.46
HLA-DMA-202ENST00000395303 U2SURPO15042 1029 aaKnown RBP17.92■□□□□ 0.46
HLA-DMA-202ENST00000395303 ZNF827Q17R98 1081 aa17.92■□□□□ 0.46
HLA-DMA-202ENST00000395303 AKAP4Q5JQC9 854 aa17.92■□□□□ 0.46
HLA-DMA-202ENST00000395303 SMARCC1Q92922 1105 aaPredicted RBP17.92■□□□□ 0.46
HLA-DMA-202ENST00000395303 FHDC1Q9C0D6 1143 aaPredicted RBP17.92■□□□□ 0.46
HLA-DMA-202ENST00000395303 TMOD3Q9NYL9 352 aa17.92■□□□□ 0.46
HLA-DMA-202ENST00000395303 DLG5Q8TDM6 1919 aa17.92■□□□□ 0.46
HLA-DMA-202ENST00000395303 PALLDQ8WX93 1383 aa17.91■□□□□ 0.46
HLA-DMA-202ENST00000395303 SIPA1L3O60292 1781 aaPredicted RBP17.91■□□□□ 0.46
HLA-DMA-202ENST00000395303 MRC1P22897 1456 aa17.91■□□□□ 0.46
HLA-DMA-202ENST00000395303 RSPH6AQ9H0K4 717 aa17.91■□□□□ 0.46
HLA-DMA-202ENST00000395303 COL24A1Q17RW2 1714 aa17.91■□□□□ 0.46
HLA-DMA-202ENST00000395303 UBR3Q6ZT12 1888 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms