RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 NBR1Q14596 966 aa23.55■■□□□ 1.36
SIL1-202ENST00000394817 CRB1P82279 1406 aa23.54■■□□□ 1.36
SIL1-202ENST00000394817 LTN1O94822 1766 aa23.54■■□□□ 1.36
SIL1-202ENST00000394817 ZBTB7BO15156 539 aaPredicted RBP23.53■■□□□ 1.36
SIL1-202ENST00000394817 HAP1P54257 671 aaPredicted RBP23.53■■□□□ 1.36
SIL1-202ENST00000394817 AMPHP49418 695 aa23.53■■□□□ 1.36
SIL1-202ENST00000394817 C19orf44Q9H6X5 657 aa23.53■■□□□ 1.36
SIL1-202ENST00000394817 PSME1Q06323 249 aa23.52■■□□□ 1.36
SIL1-202ENST00000394817 API5Q9BZZ5 524 aaKnown RBP23.52■■□□□ 1.36
SIL1-202ENST00000394817 C1orf167Q5SNV9 1468 aa23.51■■□□□ 1.35
SIL1-202ENST00000394817 SEC24BO95487 1268 aa23.51■■□□□ 1.35
SIL1-202ENST00000394817 MCM10Q7L590 875 aa23.51■■□□□ 1.35
SIL1-202ENST00000394817 XPCQ01831 940 aaPredicted RBP23.5■■□□□ 1.35
SIL1-202ENST00000394817 FOXO3O43524 673 aa23.49■■□□□ 1.35
SIL1-202ENST00000394817 EYA1Q99502 592 aa23.49■■□□□ 1.35
SIL1-202ENST00000394817 XIRP1Q702N8 1843 aaKnown RBP23.49■■□□□ 1.35
SIL1-202ENST00000394817 KIF1AQ12756 1690 aa23.48■■□□□ 1.35
SIL1-202ENST00000394817 MTHFSDQ2M296 383 aaKnown RBP23.48■■□□□ 1.35
SIL1-202ENST00000394817 RTL1A6NKG5 1358 aa23.48■■□□□ 1.35
SIL1-202ENST00000394817 TRPM3Q9HCF6 1732 aaPredicted RBP23.47■■□□□ 1.35
SIL1-202ENST00000394817 HOXC9P31274 260 aa23.47■■□□□ 1.35
SIL1-202ENST00000394817 NUCB1Q02818 461 aa23.47■■□□□ 1.35
SIL1-202ENST00000394817 DAXXQ9UER7 740 aaPredicted RBP23.47■■□□□ 1.35
SIL1-202ENST00000394817 RGS12O14924 1447 aa23.47■■□□□ 1.35
SIL1-202ENST00000394817 MST1RQ04912 1400 aa23.47■■□□□ 1.35
SIL1-202ENST00000394817 PHRF1Q9P1Y6 1649 aaKnown RBP23.46■■□□□ 1.35
SIL1-202ENST00000394817 GAS2L2Q8NHY3 880 aa23.46■■□□□ 1.35
SIL1-202ENST00000394817 NFAT5O94916 1531 aa23.46■■□□□ 1.35
SIL1-202ENST00000394817 UPF2Q9HAU5 1272 aaKnown RBP23.45■■□□□ 1.34
SIL1-202ENST00000394817 ATF3P18847 181 aa23.44■■□□□ 1.34
SIL1-202ENST00000394817 KRT24Q2M2I5 525 aa23.44■■□□□ 1.34
SIL1-202ENST00000394817 RTF1Q92541 710 aaKnown RBP23.44■■□□□ 1.34
SIL1-202ENST00000394817 DCCP43146 1447 aa23.44■■□□□ 1.34
SIL1-202ENST00000394817 RTL5Q5HYW3 569 aaPredicted RBP23.43■■□□□ 1.34
SIL1-202ENST00000394817 GCC1Q96CN9 775 aa23.43■■□□□ 1.34
SIL1-202ENST00000394817 NCOA3Q9Y6Q9 1424 aa23.43■■□□□ 1.34
SIL1-202ENST00000394817 SLC4A3P48751 1232 aa23.43■■□□□ 1.34
SIL1-202ENST00000394817 HTATSF1O43719 755 aaKnown RBP23.42■■□□□ 1.34
SIL1-202ENST00000394817 INTS3Q68E01 1043 aaKnown RBP23.42■■□□□ 1.34
SIL1-202ENST00000394817 TBC1D32Q96NH3 1257 aa23.42■■□□□ 1.34
SIL1-202ENST00000394817 CHD1LQ86WJ1 897 aa23.41■■□□□ 1.34
SIL1-202ENST00000394817 FAM208AQ9UK61 1670 aaKnown RBP23.41■■□□□ 1.34
SIL1-202ENST00000394817 PTPRCP08575 1304 aa23.41■■□□□ 1.34
SIL1-202ENST00000394817 C1orf115Q9H7X2 142 aa23.41■■□□□ 1.34
SIL1-202ENST00000394817 USP35Q9P2H5 1018 aa23.41■■□□□ 1.34
SIL1-202ENST00000394817 CACNA1FO60840 1977 aa23.41■■□□□ 1.34
SIL1-202ENST00000394817 KRT28Q7Z3Y7 464 aa23.39■■□□□ 1.34
SIL1-202ENST00000394817 ZNF335Q9H4Z2 1342 aaPredicted RBP23.39■■□□□ 1.33
SIL1-202ENST00000394817 PLEKHG5O94827 1062 aa23.39■■□□□ 1.33
SIL1-202ENST00000394817 SIRT2Q8IXJ6 389 aa23.39■■□□□ 1.33
SIL1-202ENST00000394817 TSPYL4Q9UJ04 414 aa23.39■■□□□ 1.33
SIL1-202ENST00000394817 DDX17Q92841 729 aaKnown RBP23.38■■□□□ 1.33
SIL1-202ENST00000394817 LNPKQ9C0E8 428 aa23.38■■□□□ 1.33
SIL1-202ENST00000394817 MSH6P52701 1360 aa23.37■■□□□ 1.33
SIL1-202ENST00000394817 LMOD2Q6P5Q4 547 aa23.37■■□□□ 1.33
SIL1-202ENST00000394817 ALS2Q96Q42 1657 aa23.36■■□□□ 1.33
SIL1-202ENST00000394817 SLIT3O75094 1523 aa23.36■■□□□ 1.33
SIL1-202ENST00000394817 MAP3K5Q99683 1374 aa23.36■■□□□ 1.33
SIL1-202ENST00000394817 ATP10DQ9P241 1426 aa23.36■■□□□ 1.33
SIL1-202ENST00000394817 GNAT3A8MTJ3 354 aa23.35■■□□□ 1.33
SIL1-202ENST00000394817 N4BP2Q86UW6 1770 aaPredicted RBP23.35■■□□□ 1.33
SIL1-202ENST00000394817 CADPS2Q86UW7 1296 aa23.35■■□□□ 1.33
SIL1-202ENST00000394817 RGPD2P0DJD1 1756 aa23.34■■□□□ 1.33
SIL1-202ENST00000394817 BECN1Q14457 450 aa23.34■■□□□ 1.33
SIL1-202ENST00000394817 LTV1Q96GA3 475 aaPredicted RBP23.34■■□□□ 1.33
SIL1-202ENST00000394817 MIS18AQ9NYP9 233 aa23.34■■□□□ 1.33
SIL1-202ENST00000394817 ZBTB7CA1YPR0 619 aa23.33■■□□□ 1.33
SIL1-202ENST00000394817 IP6K1Q92551 441 aa23.33■■□□□ 1.33
SIL1-202ENST00000394817 ANKRD45Q5TZF3 282 aa23.32■■□□□ 1.32
SIL1-202ENST00000394817 KCNH5Q8NCM2 988 aa23.32■■□□□ 1.32
SIL1-202ENST00000394817 BMP2KLQ5H9B9 411 aa23.31■■□□□ 1.32
SIL1-202ENST00000394817 SLC4A2P04920 1241 aa23.31■■□□□ 1.32
SIL1-202ENST00000394817 MED1Q15648 1581 aaPredicted RBP23.31■■□□□ 1.32
SIL1-202ENST00000394817 BABAM1Q9NWV8 329 aa23.31■■□□□ 1.32
SIL1-202ENST00000394817 LMO7Q8WWI1 1683 aa23.3■■□□□ 1.32
SIL1-202ENST00000394817 SOS1Q07889 1333 aaPredicted RBP23.3■■□□□ 1.32
SIL1-202ENST00000394817 GCP02774 474 aa23.3■■□□□ 1.32
SIL1-202ENST00000394817 DEKP35659 375 aaKnown RBP23.29■■□□□ 1.32
SIL1-202ENST00000394817 ANKRD44Q8N8A2 993 aa23.29■■□□□ 1.32
SIL1-202ENST00000394817 KDM3BQ7LBC6 1761 aa23.27■■□□□ 1.32
SIL1-202ENST00000394817 CAMTA1Q9Y6Y1 1673 aa23.27■■□□□ 1.32
SIL1-202ENST00000394817 MFAP1P55081 439 aaKnown RBP23.27■■□□□ 1.32
SIL1-202ENST00000394817 RPAP2Q8IXW5 612 aaPredicted RBP23.27■■□□□ 1.32
SIL1-202ENST00000394817 USHBP1Q8N6Y0 703 aa23.27■■□□□ 1.32
SIL1-202ENST00000394817 IL17REQ8NFR9 667 aa23.27■■□□□ 1.32
SIL1-202ENST00000394817 C22orf23Q9BZE7 217 aa23.27■■□□□ 1.32
SIL1-202ENST00000394817 DCTPP1Q9H773 170 aa23.27■■□□□ 1.32
SIL1-202ENST00000394817 PXDNQ92626 1479 aa23.27■■□□□ 1.32
SIL1-202ENST00000394817 ARHGEF25Q86VW2 580 aa23.25■■□□□ 1.31
SIL1-202ENST00000394817 NCAPD2Q15021 1401 aa23.25■■□□□ 1.31
SIL1-202ENST00000394817 CEMIPQ8WUJ3 1361 aa23.25■■□□□ 1.31
SIL1-202ENST00000394817 NFKBIBQ15653 356 aa23.25■■□□□ 1.31
SIL1-202ENST00000394817 CEP85Q6P2H3 762 aa23.25■■□□□ 1.31
SIL1-202ENST00000394817 NPHP3Q7Z494 1330 aa23.24■■□□□ 1.31
SIL1-202ENST00000394817 G2E3Q7L622 706 aa23.24■■□□□ 1.31
SIL1-202ENST00000394817 STK31Q9BXU1 1019 aa23.24■■□□□ 1.31
SIL1-202ENST00000394817 RGPD5Q99666 1765 aa23.24■■□□□ 1.31
SIL1-202ENST00000394817 CCT4P50991 539 aaKnown RBP23.23■■□□□ 1.31
SIL1-202ENST00000394817 TAF7Q15545 349 aaPredicted RBP23.23■■□□□ 1.31
SIL1-202ENST00000394817 BRINP3Q76B58 766 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms