RNA–Protein interactions for RNA: ENST00000394767.2

CXXC4-201, Transcript of CXXC finger protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CXXC4, Length 5,565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-201ENST00000394767 DIAPH3Q9NSV4 1193 aa23.83■■□□□ 1.4
CXXC4-201ENST00000394767 PRR36Q9H6K5 1346 aa23.82■■□□□ 1.4
CXXC4-201ENST00000394767 LRRFIP1Q32MZ4 808 aaKnown RBP23.82■■□□□ 1.4
CXXC4-201ENST00000394767 GOLGA6L22H0YM25 854 aa23.82■■□□□ 1.4
CXXC4-201ENST00000394767 CNNM1Q9NRU3 951 aa23.82■■□□□ 1.4
CXXC4-201ENST00000394767 ZNF652Q9Y2D9 606 aa23.82■■□□□ 1.4
CXXC4-201ENST00000394767 LMTK2Q8IWU2 1503 aa23.82■■□□□ 1.4
CXXC4-201ENST00000394767 CLASRPQ8N2M8 674 aaKnown RBP23.82■■□□□ 1.4
CXXC4-201ENST00000394767 TEX13AQ9BXU3 409 aaPredicted RBP23.82■■□□□ 1.4
CXXC4-201ENST00000394767 SPHKAPQ2M3C7 1700 aa23.81■■□□□ 1.4
CXXC4-201ENST00000394767 SNRPA1P09661 255 aaKnown RBP23.81■■□□□ 1.4
CXXC4-201ENST00000394767 LARP1Q6PKG0 1096 aaKnown RBP23.81■■□□□ 1.4
CXXC4-201ENST00000394767 RARSP54136 660 aaKnown RBP23.8■■□□□ 1.4
CXXC4-201ENST00000394767 NPC1L1Q9UHC9 1359 aa23.8■■□□□ 1.4
CXXC4-201ENST00000394767 NFATC2IPQ8NCF5 419 aa23.8■■□□□ 1.4
CXXC4-201ENST00000394767 USP21Q9UK80 565 aa23.8■■□□□ 1.4
CXXC4-201ENST00000394767 ADGRB3O60242 1522 aa23.8■■□□□ 1.4
CXXC4-201ENST00000394767 BCL11BQ9C0K0 894 aaPredicted RBP23.8■■□□□ 1.4
CXXC4-201ENST00000394767 NOL10Q9BSC4 688 aaKnown RBP23.79■■□□□ 1.4
CXXC4-201ENST00000394767 IL13P35225 146 aa23.79■■□□□ 1.4
CXXC4-201ENST00000394767 MVPQ14764 893 aaKnown RBP23.79■■□□□ 1.4
CXXC4-201ENST00000394767 CCDC85AQ96PX6 553 aaPredicted RBP23.79■■□□□ 1.4
CXXC4-201ENST00000394767 PTPRMP28827 1452 aa23.79■■□□□ 1.4
CXXC4-201ENST00000394767 SPRYD3Q8NCJ5 442 aa23.79■■□□□ 1.4
CXXC4-201ENST00000394767 SIL1Q9H173 461 aa23.79■■□□□ 1.4
CXXC4-201ENST00000394767 CAMSAP1Q5T5Y3 1602 aa23.78■■□□□ 1.4
CXXC4-201ENST00000394767 CCDC57Q2TAC2 916 aa23.78■■□□□ 1.4
CXXC4-201ENST00000394767 HYPKQ9NX55 129 aa23.78■■□□□ 1.4
CXXC4-201ENST00000394767 AK7Q96M32 723 aa23.78■■□□□ 1.4
CXXC4-201ENST00000394767 ALDH1L2Q3SY69 923 aa23.78■■□□□ 1.4
CXXC4-201ENST00000394767 MYD88Q99836 296 aa23.78■■□□□ 1.4
CXXC4-201ENST00000394767 F6X3S4 739 aa23.78■■□□□ 1.4
CXXC4-201ENST00000394767 FAM98CQ17RN3 349 aaKnown RBP23.78■■□□□ 1.4
CXXC4-201ENST00000394767 HTATSF1O43719 755 aaKnown RBP23.77■■□□□ 1.4
CXXC4-201ENST00000394767 ZBTB3Q9H5J0 574 aa23.77■■□□□ 1.4
CXXC4-201ENST00000394767 ERC2O15083 957 aa23.77■■□□□ 1.4
CXXC4-201ENST00000394767 ANP32BQ92688 251 aaKnown RBP23.77■■□□□ 1.4
CXXC4-201ENST00000394767 MPHOSPH8Q99549 860 aa23.77■■□□□ 1.4
CXXC4-201ENST00000394767 ANXA1P04083 346 aa23.76■■□□□ 1.39
CXXC4-201ENST00000394767 TMEM57Q8N5G2 664 aa23.76■■□□□ 1.39
CXXC4-201ENST00000394767 E9PCH4 1651 aa23.76■■□□□ 1.39
CXXC4-201ENST00000394767 NBPF6Q5VWK0 638 aa23.76■■□□□ 1.39
CXXC4-201ENST00000394767 DCAF5Q96JK2 942 aa23.76■■□□□ 1.39
CXXC4-201ENST00000394767 NBPF4Q96M43 638 aa23.76■■□□□ 1.39
CXXC4-201ENST00000394767 RSPH6AQ9H0K4 717 aa23.76■■□□□ 1.39
CXXC4-201ENST00000394767 PPRC1Q5VV67 1664 aaKnown RBP23.76■■□□□ 1.39
CXXC4-201ENST00000394767 IL16Q14005 1332 aa23.76■■□□□ 1.39
CXXC4-201ENST00000394767 CDCA7Q9BWT1 371 aaPredicted RBP23.75■■□□□ 1.39
CXXC4-201ENST00000394767 PCDH11XQ9BZA7 1347 aa23.75■■□□□ 1.39
CXXC4-201ENST00000394767 PCDH11YQ9BZA8 1340 aa23.75■■□□□ 1.39
CXXC4-201ENST00000394767 SRGAP3O43295 1099 aa23.75■■□□□ 1.39
CXXC4-201ENST00000394767 ATP6V1AP38606 617 aa23.74■■□□□ 1.39
CXXC4-201ENST00000394767 BRINP3Q76B58 766 aa23.74■■□□□ 1.39
CXXC4-201ENST00000394767 FLIIQ13045 1269 aa23.74■■□□□ 1.39
CXXC4-201ENST00000394767 SMARCC1Q92922 1105 aaPredicted RBP23.74■■□□□ 1.39
CXXC4-201ENST00000394767 SYNMO15061 1565 aa23.74■■□□□ 1.39
CXXC4-201ENST00000394767 RUFY2Q8WXA3 655 aa23.74■■□□□ 1.39
CXXC4-201ENST00000394767 NKTRP30414 1462 aaKnown RBP23.74■■□□□ 1.39
CXXC4-201ENST00000394767 PHF14O94880 888 aa23.73■■□□□ 1.39
CXXC4-201ENST00000394767 APPP05067 770 aa23.73■■□□□ 1.39
CXXC4-201ENST00000394767 DNAAF4Q8WXU2 420 aa23.73■■□□□ 1.39
CXXC4-201ENST00000394767 GPTP24298 496 aa23.73■■□□□ 1.39
CXXC4-201ENST00000394767 MAP3K5Q99683 1374 aa23.72■■□□□ 1.39
CXXC4-201ENST00000394767 ALKQ9UM73 1620 aa23.71■■□□□ 1.39
CXXC4-201ENST00000394767 KDM5AP29375 1690 aaKnown RBP23.71■■□□□ 1.39
CXXC4-201ENST00000394767 ERC1Q8IUD2 1116 aa23.71■■□□□ 1.39
CXXC4-201ENST00000394767 HSP90AB3PQ58FF7 597 aa23.7■■□□□ 1.39
CXXC4-201ENST00000394767 NOL8Q76FK4 1167 aaKnown RBP23.7■■□□□ 1.38
CXXC4-201ENST00000394767 RNMTO43148 476 aaKnown RBP23.7■■□□□ 1.38
CXXC4-201ENST00000394767 TRMT112Q9UI30 125 aaKnown RBP23.7■■□□□ 1.38
CXXC4-201ENST00000394767 USP6P35125 1406 aa23.69■■□□□ 1.38
CXXC4-201ENST00000394767 ZMYM4Q5VZL5 1548 aa23.68■■□□□ 1.38
CXXC4-201ENST00000394767 CCDC27Q2M243 656 aa23.68■■□□□ 1.38
CXXC4-201ENST00000394767 RFC4P35249 363 aa23.68■■□□□ 1.38
CXXC4-201ENST00000394767 KIAA0232Q92628 1395 aa23.68■■□□□ 1.38
CXXC4-201ENST00000394767 DCAF8L1A6NGE4 600 aa23.68■■□□□ 1.38
CXXC4-201ENST00000394767 FAM161AQ3B820 660 aa23.68■■□□□ 1.38
CXXC4-201ENST00000394767 PI4KAP2A4QPH2 592 aa23.67■■□□□ 1.38
CXXC4-201ENST00000394767 PI4KAP1Q8N8J0 262 aa23.67■■□□□ 1.38
CXXC4-201ENST00000394767 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.67■■□□□ 1.38
CXXC4-201ENST00000394767 WASHC4Q2M389 1173 aa23.67■■□□□ 1.38
CXXC4-201ENST00000394767 MAP3K2Q9Y2U5 619 aa23.67■■□□□ 1.38
CXXC4-201ENST00000394767 ATP5J2-PTCD1G3V325 749 aa23.67■■□□□ 1.38
CXXC4-201ENST00000394767 C8orf58Q8NAV2 365 aa23.66■■□□□ 1.38
CXXC4-201ENST00000394767 GCC1Q96CN9 775 aa23.66■■□□□ 1.38
CXXC4-201ENST00000394767 CHPF2Q9P2E5 772 aa23.66■■□□□ 1.38
CXXC4-201ENST00000394767 PIP4K2AP48426 406 aaPredicted RBP23.66■■□□□ 1.38
CXXC4-201ENST00000394767 AMOTL1Q8IY63 956 aa23.66■■□□□ 1.38
CXXC4-201ENST00000394767 GNL2Q13823 731 aaKnown RBP23.66■■□□□ 1.38
CXXC4-201ENST00000394767 A0A087WZG4 1122 aa23.66■■□□□ 1.38
CXXC4-201ENST00000394767 DNAJC2Q99543 621 aaKnown RBP23.65■■□□□ 1.38
CXXC4-201ENST00000394767 CEP126Q9P2H0 1117 aa23.65■■□□□ 1.38
CXXC4-201ENST00000394767 ATP7BP35670 1465 aa23.65■■□□□ 1.38
CXXC4-201ENST00000394767 ARHGEF25Q86VW2 580 aa23.65■■□□□ 1.38
CXXC4-201ENST00000394767 RIMS1Q86UR5 1692 aaKnown RBP23.64■■□□□ 1.38
CXXC4-201ENST00000394767 IGHMBP2P38935 993 aaKnown RBP23.64■■□□□ 1.38
CXXC4-201ENST00000394767 ADGRL3Q9HAR2 1447 aa23.64■■□□□ 1.37
CXXC4-201ENST00000394767 ANO2Q9NQ90 1003 aa23.64■■□□□ 1.37
CXXC4-201ENST00000394767 ANKRD13DQ6ZTN6 518 aa23.64■■□□□ 1.37
CXXC4-201ENST00000394767 TRIM34Q9BYJ4 488 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms