RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 WDR63Q8IWG1 891 aa10.95□□□□□ -0.66
CDH11-202ENST00000394156 UPF3BQ9BZI7 483 aaKnown RBP10.95□□□□□ -0.66
CDH11-202ENST00000394156 SNRKQ9NRH2 765 aa10.95□□□□□ -0.66
CDH11-202ENST00000394156 MBIPQ9NS73 344 aa10.95□□□□□ -0.66
CDH11-202ENST00000394156 IQSEC3Q9UPP2 1182 aaPredicted RBP10.95□□□□□ -0.66
CDH11-202ENST00000394156 CCDC158Q5M9N0 1113 aa10.95□□□□□ -0.66
CDH11-202ENST00000394156 NGLY1Q96IV0 654 aa10.95□□□□□ -0.66
CDH11-202ENST00000394156 JAKMIP1Q96N16 626 aaKnown RBP10.95□□□□□ -0.66
CDH11-202ENST00000394156 JAG2Q9Y219 1238 aa10.95□□□□□ -0.66
CDH11-202ENST00000394156 CFAP43Q8NDM7 1665 aa10.95□□□□□ -0.66
CDH11-202ENST00000394156 TRIM27P14373 513 aa10.95□□□□□ -0.66
CDH11-202ENST00000394156 CWC22Q9HCG8 908 aaKnown RBP10.95□□□□□ -0.66
CDH11-202ENST00000394156 TRMT1LQ7Z2T5 733 aaKnown RBP10.95□□□□□ -0.66
CDH11-202ENST00000394156 DENND4BO75064 1496 aaPredicted RBP10.95□□□□□ -0.66
CDH11-202ENST00000394156 ADAMTS12P58397 1594 aa10.95□□□□□ -0.66
CDH11-202ENST00000394156 FCHSD2O94868 740 aa10.95□□□□□ -0.66
CDH11-202ENST00000394156 CASTP20810 708 aaKnown RBP10.94□□□□□ -0.66
CDH11-202ENST00000394156 CAMK4Q16566 473 aa10.94□□□□□ -0.66
CDH11-202ENST00000394156 ANKRD24Q8TF21 1146 aa10.94□□□□□ -0.66
CDH11-202ENST00000394156 BACH2Q9BYV9 841 aa10.94□□□□□ -0.66
CDH11-202ENST00000394156 RPRD2Q5VT52 1461 aaKnown RBP10.94□□□□□ -0.66
CDH11-202ENST00000394156 MPHOSPH10O00566 681 aaKnown RBP10.94□□□□□ -0.66
CDH11-202ENST00000394156 TRAK2O60296 914 aa10.94□□□□□ -0.66
CDH11-202ENST00000394156 ZSCAN29Q8IWY8 852 aaPredicted RBP10.94□□□□□ -0.66
CDH11-202ENST00000394156 RAI14Q9P0K7 980 aa10.94□□□□□ -0.66
CDH11-202ENST00000394156 SKIDA1Q1XH10 827 aa10.93□□□□□ -0.66
CDH11-202ENST00000394156 C8orf37Q96NL8 207 aa10.93□□□□□ -0.66
CDH11-202ENST00000394156 ATAD2Q6PL18 1390 aa10.93□□□□□ -0.66
CDH11-202ENST00000394156 MINDY4BA8MYZ0 360 aa10.93□□□□□ -0.66
CDH11-202ENST00000394156 CCT4P50991 539 aaKnown RBP10.93□□□□□ -0.66
CDH11-202ENST00000394156 TBC1D2BQ9UPU7 963 aa10.93□□□□□ -0.66
CDH11-202ENST00000394156 PPIP5K1Q6PFW1 1433 aa10.93□□□□□ -0.66
CDH11-202ENST00000394156 METTL24Q5JXM2 366 aa10.93□□□□□ -0.66
CDH11-202ENST00000394156 SASS6Q6UVJ0 657 aa10.93□□□□□ -0.66
CDH11-202ENST00000394156 FERMT3Q86UX7 667 aa10.93□□□□□ -0.66
CDH11-202ENST00000394156 CHPF2Q9P2E5 772 aa10.93□□□□□ -0.66
CDH11-202ENST00000394156 PTMSP20962 102 aa10.92□□□□□ -0.66
CDH11-202ENST00000394156 CHMP4BP1P59074 171 aa10.92□□□□□ -0.66
CDH11-202ENST00000394156 TSPYL6Q8N831 410 aa10.92□□□□□ -0.66
CDH11-202ENST00000394156 LRP2BPQ9P2M1 347 aa10.92□□□□□ -0.66
CDH11-202ENST00000394156 A0A0U1RQG5 324 aaPredicted RBP10.92□□□□□ -0.66
CDH11-202ENST00000394156 HSP90AB4PQ58FF6 505 aa10.92□□□□□ -0.66
CDH11-202ENST00000394156 GDPD2Q9HCC8 539 aa10.92□□□□□ -0.66
CDH11-202ENST00000394156 POGZQ7Z3K3 1410 aa10.92□□□□□ -0.66
CDH11-202ENST00000394156 CCDC24Q8N4L8 307 aa10.91□□□□□ -0.66
CDH11-202ENST00000394156 C8orf58Q8NAV2 365 aa10.91□□□□□ -0.66
CDH11-202ENST00000394156 CARD14Q9BXL6 1004 aa10.91□□□□□ -0.66
CDH11-202ENST00000394156 ANKIB1Q9P2G1 1089 aa10.91□□□□□ -0.66
CDH11-202ENST00000394156 WDR62O43379 1518 aa10.91□□□□□ -0.66
CDH11-202ENST00000394156 HAND2P61296 217 aa10.91□□□□□ -0.66
CDH11-202ENST00000394156 PDE3AQ14432 1141 aa10.91□□□□□ -0.66
CDH11-202ENST00000394156 CCDC83Q8IWF9 413 aa10.91□□□□□ -0.66
CDH11-202ENST00000394156 ZHX3Q9H4I2 956 aa10.91□□□□□ -0.66
CDH11-202ENST00000394156 KDM6BO15054 1643 aa10.91□□□□□ -0.66
CDH11-202ENST00000394156 KIF3AQ9Y496 699 aa10.91□□□□□ -0.66
CDH11-202ENST00000394156 TDO2P48775 406 aa10.91□□□□□ -0.66
CDH11-202ENST00000394156 NAP1L1P55209 391 aaKnown RBP10.91□□□□□ -0.66
CDH11-202ENST00000394156 PRPF40BQ6NWY9 871 aaKnown RBP10.91□□□□□ -0.66
CDH11-202ENST00000394156 C14orf93Q9H972 538 aaKnown RBP10.91□□□□□ -0.66
CDH11-202ENST00000394156 USP5P45974 858 aa10.9□□□□□ -0.66
CDH11-202ENST00000394156 CCT2P78371 535 aaKnown RBP10.9□□□□□ -0.66
CDH11-202ENST00000394156 NKTRP30414 1462 aaKnown RBP10.9□□□□□ -0.66
CDH11-202ENST00000394156 SCAF11Q99590 1463 aaKnown RBP10.9□□□□□ -0.66
CDH11-202ENST00000394156 LRRFIP1Q32MZ4 808 aaKnown RBP10.9□□□□□ -0.66
CDH11-202ENST00000394156 CPLX2Q6PUV4 134 aaKnown RBP10.9□□□□□ -0.66
CDH11-202ENST00000394156 PI4KAP2A4QPH2 592 aa10.9□□□□□ -0.66
CDH11-202ENST00000394156 PI4KAP1Q8N8J0 262 aa10.9□□□□□ -0.66
CDH11-202ENST00000394156 GCC1Q96CN9 775 aa10.9□□□□□ -0.66
CDH11-202ENST00000394156 RPGRIP1LQ68CZ1 1315 aa10.9□□□□□ -0.66
CDH11-202ENST00000394156 LRRC2Q9BYS8 371 aa10.9□□□□□ -0.66
CDH11-202ENST00000394156 FAM13BQ9NYF5 915 aa10.9□□□□□ -0.66
CDH11-202ENST00000394156 PA2G4Q9UQ80 394 aaKnown RBP10.9□□□□□ -0.66
CDH11-202ENST00000394156 PHACTR3Q96KR7 559 aa10.9□□□□□ -0.67
CDH11-202ENST00000394156 HOMER1Q86YM7 354 aa10.89□□□□□ -0.67
CDH11-202ENST00000394156 SDF4Q9BRK5 362 aa10.89□□□□□ -0.67
CDH11-202ENST00000394156 SF3B2Q13435 895 aaKnown RBP10.89□□□□□ -0.67
CDH11-202ENST00000394156 FAM177A1Q8N128 213 aaPredicted RBP10.89□□□□□ -0.67
CDH11-202ENST00000394156 ZBTB9Q96C00 473 aa10.89□□□□□ -0.67
CDH11-202ENST00000394156 TCEANC2Q96MN5 208 aa10.89□□□□□ -0.67
CDH11-202ENST00000394156 IFT57Q9NWB7 429 aa10.89□□□□□ -0.67
CDH11-202ENST00000394156 TRMT112Q9UI30 125 aaKnown RBP10.89□□□□□ -0.67
CDH11-202ENST00000394156 CEP170Q5SW79 1584 aa10.89□□□□□ -0.67
CDH11-202ENST00000394156 SMC2O95347 1197 aa10.89□□□□□ -0.67
CDH11-202ENST00000394156 PPP6R1Q9UPN7 881 aa10.89□□□□□ -0.67
CDH11-202ENST00000394156 A0A087WZG4 1122 aa10.88□□□□□ -0.67
CDH11-202ENST00000394156 ISM2Q6H9L7 571 aa10.88□□□□□ -0.67
CDH11-202ENST00000394156 MEIS3Q99687 375 aa10.88□□□□□ -0.67
CDH11-202ENST00000394156 CCDC69A6NI79 296 aa10.88□□□□□ -0.67
CDH11-202ENST00000394156 F8W031 263 aaPredicted RBP10.88□□□□□ -0.67
CDH11-202ENST00000394156 UBE3BQ7Z3V4 1068 aa10.88□□□□□ -0.67
CDH11-202ENST00000394156 TMX1Q9H3N1 280 aa10.88□□□□□ -0.67
CDH11-202ENST00000394156 PDRG1Q9NUG6 133 aa10.88□□□□□ -0.67
CDH11-202ENST00000394156 ATP6V1DQ9Y5K8 247 aa10.88□□□□□ -0.67
CDH11-202ENST00000394156 DHX29Q7Z478 1369 aaKnown RBP10.88□□□□□ -0.67
CDH11-202ENST00000394156 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.88□□□□□ -0.67
CDH11-202ENST00000394156 ZPR1O75312 459 aa10.88□□□□□ -0.67
CDH11-202ENST00000394156 NASPP49321 788 aaPredicted RBP10.88□□□□□ -0.67
CDH11-202ENST00000394156 STAC3Q96MF2 364 aa10.88□□□□□ -0.67
CDH11-202ENST00000394156 CYP46A1Q9Y6A2 500 aa10.88□□□□□ -0.67
CDH11-202ENST00000394156 TNRQ92752 1358 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms