RNA–Protein interactions for RNA: ENST00000393829.6

ATP6V0A1-203, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 1 (best) BASIC

Gene ATP6V0A1, Length 3,028 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-203ENST00000393829 MSH6P52701 1360 aa17.98■□□□□ 0.47
ATP6V0A1-203ENST00000393829 ITSN1Q15811 1721 aa17.98■□□□□ 0.47
ATP6V0A1-203ENST00000393829 SMARCA5O60264 1052 aaPredicted RBP17.98■□□□□ 0.47
ATP6V0A1-203ENST00000393829 EIF4A2Q14240 407 aaKnown RBP17.98■□□□□ 0.47
ATP6V0A1-203ENST00000393829 RPAP2Q8IXW5 612 aaPredicted RBP17.98■□□□□ 0.47
ATP6V0A1-203ENST00000393829 GOLGA6L22H0YM25 854 aa17.98■□□□□ 0.47
ATP6V0A1-203ENST00000393829 CHL1O00533 1208 aa17.98■□□□□ 0.47
ATP6V0A1-203ENST00000393829 RTL1A6NKG5 1358 aa17.97■□□□□ 0.47
ATP6V0A1-203ENST00000393829 SDSP20132 328 aa17.97■□□□□ 0.47
ATP6V0A1-203ENST00000393829 MCM10Q7L590 875 aa17.97■□□□□ 0.47
ATP6V0A1-203ENST00000393829 KLHL40Q2TBA0 621 aa17.97■□□□□ 0.47
ATP6V0A1-203ENST00000393829 PRR36Q9H6K5 1346 aa17.97■□□□□ 0.47
ATP6V0A1-203ENST00000393829 APBB1O00213 710 aa17.96■□□□□ 0.47
ATP6V0A1-203ENST00000393829 MEIS3Q99687 375 aa17.96■□□□□ 0.47
ATP6V0A1-203ENST00000393829 PPP6R1Q9UPN7 881 aa17.96■□□□□ 0.47
ATP6V0A1-203ENST00000393829 DDX49Q9Y6V7 483 aaKnown RBP17.96■□□□□ 0.47
ATP6V0A1-203ENST00000393829 AGLP35573 1532 aa17.96■□□□□ 0.47
ATP6V0A1-203ENST00000393829 KIAA0232Q92628 1395 aa17.95■□□□□ 0.46
ATP6V0A1-203ENST00000393829 CYP2E1P05181 493 aaPredicted RBP17.95■□□□□ 0.46
ATP6V0A1-203ENST00000393829 TRIM44Q96DX7 344 aaPredicted RBP17.95■□□□□ 0.46
ATP6V0A1-203ENST00000393829 PKP1Q13835 747 aa17.94■□□□□ 0.46
ATP6V0A1-203ENST00000393829 IBTKQ9P2D0 1353 aaPredicted RBP17.94■□□□□ 0.46
ATP6V0A1-203ENST00000393829 PTPRCP08575 1304 aa17.93■□□□□ 0.46
ATP6V0A1-203ENST00000393829 HAP1P54257 671 aaPredicted RBP17.93■□□□□ 0.46
ATP6V0A1-203ENST00000393829 MLECQ14165 292 aa17.93■□□□□ 0.46
ATP6V0A1-203ENST00000393829 NUCB2P80303 420 aa17.93■□□□□ 0.46
ATP6V0A1-203ENST00000393829 MCTP1Q6DN14 999 aa17.93■□□□□ 0.46
ATP6V0A1-203ENST00000393829 TECPR2O15040 1411 aa17.93■□□□□ 0.46
ATP6V0A1-203ENST00000393829 UBE2Q2Q8WVN8 375 aa17.93■□□□□ 0.46
ATP6V0A1-203ENST00000393829 NASPP49321 788 aaPredicted RBP17.92■□□□□ 0.46
ATP6V0A1-203ENST00000393829 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.91■□□□□ 0.46
ATP6V0A1-203ENST00000393829 SIRT1Q96EB6 747 aa17.91■□□□□ 0.46
ATP6V0A1-203ENST00000393829 CASC1Q6TDU7 716 aa17.91■□□□□ 0.46
ATP6V0A1-203ENST00000393829 PEAK1Q9H792 1746 aa17.91■□□□□ 0.46
ATP6V0A1-203ENST00000393829 TTC21BQ7Z4L5 1316 aa17.91■□□□□ 0.46
ATP6V0A1-203ENST00000393829 SLC4A2P04920 1241 aa17.9■□□□□ 0.46
ATP6V0A1-203ENST00000393829 ZGPATQ8N5A5 531 aaKnown RBP17.9■□□□□ 0.46
ATP6V0A1-203ENST00000393829 LMBRD1Q9NUN5 540 aa17.9■□□□□ 0.46
ATP6V0A1-203ENST00000393829 CRB1P82279 1406 aa17.9■□□□□ 0.46
ATP6V0A1-203ENST00000393829 HSP90AB2PQ58FF8 381 aa17.9■□□□□ 0.46
ATP6V0A1-203ENST00000393829 PPP1R9BQ96SB3 815 aa17.9■□□□□ 0.46
ATP6V0A1-203ENST00000393829 CCDC173Q0VFZ6 552 aa17.9■□□□□ 0.46
ATP6V0A1-203ENST00000393829 MIS18AQ9NYP9 233 aa17.9■□□□□ 0.46
ATP6V0A1-203ENST00000393829 RGPD1P0DJD0 1748 aa17.89■□□□□ 0.46
ATP6V0A1-203ENST00000393829 TSPOAP1O95153 1857 aa17.89■□□□□ 0.45
ATP6V0A1-203ENST00000393829 FAM69CQ0P6D2 419 aa17.89■□□□□ 0.45
ATP6V0A1-203ENST00000393829 OVOS2A0A0J9YW53 1432 aa17.89■□□□□ 0.45
ATP6V0A1-203ENST00000393829 OVOS2Q6IE36 1432 aa17.89■□□□□ 0.45
ATP6V0A1-203ENST00000393829 ST18O60284 1047 aa17.89■□□□□ 0.45
ATP6V0A1-203ENST00000393829 G2E3Q7L622 706 aa17.88■□□□□ 0.45
ATP6V0A1-203ENST00000393829 CWC22Q9HCG8 908 aaKnown RBP17.88■□□□□ 0.45
ATP6V0A1-203ENST00000393829 REC8O95072 547 aa17.88■□□□□ 0.45
ATP6V0A1-203ENST00000393829 ZNF445P59923 1031 aa17.88■□□□□ 0.45
ATP6V0A1-203ENST00000393829 CAVIN1Q6NZI2 390 aaKnown RBP17.88■□□□□ 0.45
ATP6V0A1-203ENST00000393829 ZDHHC9Q9Y397 364 aa17.88■□□□□ 0.45
ATP6V0A1-203ENST00000393829 ROBO2Q9HCK4 1378 aa17.87■□□□□ 0.45
ATP6V0A1-203ENST00000393829 F6X3S4 739 aa17.87■□□□□ 0.45
ATP6V0A1-203ENST00000393829 ERC2O15083 957 aa17.87■□□□□ 0.45
ATP6V0A1-203ENST00000393829 NCLP19338 710 aaKnown RBP17.87■□□□□ 0.45
ATP6V0A1-203ENST00000393829 ACEP12821 1306 aa17.87■□□□□ 0.45
ATP6V0A1-203ENST00000393829 ZSCAN23Q3MJ62 389 aa17.86■□□□□ 0.45
ATP6V0A1-203ENST00000393829 FOXO3O43524 673 aa17.86■□□□□ 0.45
ATP6V0A1-203ENST00000393829 HMMRO75330 724 aa17.86■□□□□ 0.45
ATP6V0A1-203ENST00000393829 PDE1AP54750 535 aa17.86■□□□□ 0.45
ATP6V0A1-203ENST00000393829 SLC4A10Q6U841 1118 aa17.86■□□□□ 0.45
ATP6V0A1-203ENST00000393829 OSBPL3Q9H4L5 887 aa17.86■□□□□ 0.45
ATP6V0A1-203ENST00000393829 NALCNQ8IZF0 1738 aa17.86■□□□□ 0.45
ATP6V0A1-203ENST00000393829 NUTM2FA1L443 756 aa17.85■□□□□ 0.45
ATP6V0A1-203ENST00000393829 CYB5RLQ6IPT4 315 aa17.85■□□□□ 0.45
ATP6V0A1-203ENST00000393829 RIMS1Q86UR5 1692 aaKnown RBP17.84■□□□□ 0.45
ATP6V0A1-203ENST00000393829 SOX12O15370 315 aa17.84■□□□□ 0.45
ATP6V0A1-203ENST00000393829 TOPAZ1Q8N9V7 1692 aa17.84■□□□□ 0.45
ATP6V0A1-203ENST00000393829 DIP2BQ9P265 1576 aa17.84■□□□□ 0.45
ATP6V0A1-203ENST00000393829 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.84■□□□□ 0.45
ATP6V0A1-203ENST00000393829 MAP3K19Q56UN5 1328 aa17.84■□□□□ 0.45
ATP6V0A1-203ENST00000393829 PRPF40AO75400 957 aaKnown RBP17.84■□□□□ 0.45
ATP6V0A1-203ENST00000393829 GPT2Q8TD30 523 aa17.83■□□□□ 0.45
ATP6V0A1-203ENST00000393829 CHAMP1Q96JM3 812 aa17.83■□□□□ 0.45
ATP6V0A1-203ENST00000393829 TSPYL4Q9UJ04 414 aa17.83■□□□□ 0.45
ATP6V0A1-203ENST00000393829 USP6P35125 1406 aa17.83■□□□□ 0.44
ATP6V0A1-203ENST00000393829 CCT4P50991 539 aaKnown RBP17.83■□□□□ 0.44
ATP6V0A1-203ENST00000393829 MTHFSDQ2M296 383 aaKnown RBP17.83■□□□□ 0.44
ATP6V0A1-203ENST00000393829 TSHZ3Q63HK5 1081 aa17.83■□□□□ 0.44
ATP6V0A1-203ENST00000393829 USP31Q70CQ4 1352 aa17.83■□□□□ 0.44
ATP6V0A1-203ENST00000393829 ANP32BQ92688 251 aaKnown RBP17.82■□□□□ 0.44
ATP6V0A1-203ENST00000393829 EXOC6BQ9Y2D4 811 aa17.82■□□□□ 0.44
ATP6V0A1-203ENST00000393829 TUBGCP6Q96RT7 1819 aa17.82■□□□□ 0.44
ATP6V0A1-203ENST00000393829 PLEKHG3A1L390 1219 aa17.82■□□□□ 0.44
ATP6V0A1-203ENST00000393829 RBSNQ9H1K0 784 aa17.82■□□□□ 0.44
ATP6V0A1-203ENST00000393829 RBM27Q9P2N5 1060 aaKnown RBP17.82■□□□□ 0.44
ATP6V0A1-203ENST00000393829 SALL3Q9BXA9 1300 aa17.81■□□□□ 0.44
ATP6V0A1-203ENST00000393829 ZSCAN30Q86W11 494 aa17.81■□□□□ 0.44
ATP6V0A1-203ENST00000393829 ARHGEF10O15013 1369 aa17.81■□□□□ 0.44
ATP6V0A1-203ENST00000393829 GNAI2P04899 355 aa17.8■□□□□ 0.44
ATP6V0A1-203ENST00000393829 PRIM1P49642 420 aaKnown RBP17.8■□□□□ 0.44
ATP6V0A1-203ENST00000393829 HDGFP51858 240 aaKnown RBP17.8■□□□□ 0.44
ATP6V0A1-203ENST00000393829 NEK4P51957 841 aa17.8■□□□□ 0.44
ATP6V0A1-203ENST00000393829 RTF1Q92541 710 aaKnown RBP17.8■□□□□ 0.44
ATP6V0A1-203ENST00000393829 TMX3Q96JJ7 454 aa17.8■□□□□ 0.44
ATP6V0A1-203ENST00000393829 FMN2Q9NZ56 1722 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms