RNA–Protein interactions for RNA: ENST00000393585.6

CASP3-202, Transcript of caspase 3, humanhuman

TSL 1 (best) BASIC

Gene CASP3, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-202ENST00000393585 RTF1Q92541 710 aaKnown RBP14□□□□□ -0.17
CASP3-202ENST00000393585 DDX19BQ9UMR2 479 aa14□□□□□ -0.17
CASP3-202ENST00000393585 IP6K1Q92551 441 aa14□□□□□ -0.17
CASP3-202ENST00000393585 RTL1A6NKG5 1358 aa14□□□□□ -0.17
CASP3-202ENST00000393585 CRB1P82279 1406 aa13.99□□□□□ -0.17
CASP3-202ENST00000393585 BRPF1P55201 1214 aaPredicted RBP13.99□□□□□ -0.17
CASP3-202ENST00000393585 KRT28Q7Z3Y7 464 aa13.99□□□□□ -0.17
CASP3-202ENST00000393585 GAS2L2Q8NHY3 880 aa13.99□□□□□ -0.17
CASP3-202ENST00000393585 KCNH5Q8NCM2 988 aa13.99□□□□□ -0.17
CASP3-202ENST00000393585 GCP02774 474 aa13.98□□□□□ -0.17
CASP3-202ENST00000393585 DDX17Q92841 729 aaKnown RBP13.98□□□□□ -0.17
CASP3-202ENST00000393585 ATF3P18847 181 aa13.98□□□□□ -0.17
CASP3-202ENST00000393585 NPM2Q86SE8 214 aaKnown RBP13.98□□□□□ -0.17
CASP3-202ENST00000393585 NBPF6Q5VWK0 638 aa13.97□□□□□ -0.17
CASP3-202ENST00000393585 NBPF4Q96M43 638 aa13.97□□□□□ -0.17
CASP3-202ENST00000393585 TRPM3Q9HCF6 1732 aaPredicted RBP13.97□□□□□ -0.17
CASP3-202ENST00000393585 LRRC59Q96AG4 307 aaKnown RBP13.96□□□□□ -0.17
CASP3-202ENST00000393585 RWDD1Q9H446 243 aaPredicted RBP13.96□□□□□ -0.17
CASP3-202ENST00000393585 MST1RQ04912 1400 aa13.96□□□□□ -0.17
CASP3-202ENST00000393585 TSPYL4Q9UJ04 414 aa13.96□□□□□ -0.17
CASP3-202ENST00000393585 ANP32AP39687 249 aaKnown RBP13.95□□□□□ -0.18
CASP3-202ENST00000393585 ZBTB40Q9NUA8 1239 aa13.95□□□□□ -0.18
CASP3-202ENST00000393585 GNAT3A8MTJ3 354 aa13.95□□□□□ -0.18
CASP3-202ENST00000393585 ARHGEF25Q86VW2 580 aa13.95□□□□□ -0.18
CASP3-202ENST00000393585 KIF1AQ12756 1690 aa13.95□□□□□ -0.18
CASP3-202ENST00000393585 RGPD2P0DJD1 1756 aa13.95□□□□□ -0.18
CASP3-202ENST00000393585 KDM4FA0A1W2PPD8 638 aa13.94□□□□□ -0.18
CASP3-202ENST00000393585 ARHGAP45Q92619 1136 aa13.94□□□□□ -0.18
CASP3-202ENST00000393585 MSH6P52701 1360 aa13.94□□□□□ -0.18
CASP3-202ENST00000393585 SLIT3O75094 1523 aa13.94□□□□□ -0.18
CASP3-202ENST00000393585 C8orf34Q49A92 452 aa13.94□□□□□ -0.18
CASP3-202ENST00000393585 PDZRN3Q9UPQ7 1066 aa13.94□□□□□ -0.18
CASP3-202ENST00000393585 USP19O94966 1318 aa13.93□□□□□ -0.18
CASP3-202ENST00000393585 KIAA0232Q92628 1395 aa13.93□□□□□ -0.18
CASP3-202ENST00000393585 MAP3K5Q99683 1374 aa13.93□□□□□ -0.18
CASP3-202ENST00000393585 FAM161AQ3B820 660 aa13.93□□□□□ -0.18
CASP3-202ENST00000393585 CNKSR2Q8WXI2 1034 aa13.93□□□□□ -0.18
CASP3-202ENST00000393585 ABCC4O15439 1325 aa13.93□□□□□ -0.18
CASP3-202ENST00000393585 IL17REQ8NFR9 667 aa13.93□□□□□ -0.18
CASP3-202ENST00000393585 PHRF1Q9P1Y6 1649 aaKnown RBP13.92□□□□□ -0.18
CASP3-202ENST00000393585 ZC3H6P61129 1189 aaKnown RBP13.92□□□□□ -0.18
CASP3-202ENST00000393585 AXIN2Q9Y2T1 843 aa13.92□□□□□ -0.18
CASP3-202ENST00000393585 ZBTB7BO15156 539 aaPredicted RBP13.92□□□□□ -0.18
CASP3-202ENST00000393585 HTATSF1O43719 755 aaKnown RBP13.92□□□□□ -0.18
CASP3-202ENST00000393585 C1orf115Q9H7X2 142 aa13.92□□□□□ -0.18
CASP3-202ENST00000393585 DCCP43146 1447 aa13.91□□□□□ -0.18
CASP3-202ENST00000393585 CADPS2Q86UW7 1296 aa13.91□□□□□ -0.18
CASP3-202ENST00000393585 ANKRD24Q8TF21 1146 aa13.91□□□□□ -0.18
CASP3-202ENST00000393585 API5Q9BZZ5 524 aaKnown RBP13.91□□□□□ -0.18
CASP3-202ENST00000393585 LRRC37A3O60309 1634 aa13.91□□□□□ -0.18
CASP3-202ENST00000393585 LMTK3Q96Q04 1460 aa13.91□□□□□ -0.18
CASP3-202ENST00000393585 HDAC1Q13547 482 aaPredicted RBP13.91□□□□□ -0.18
CASP3-202ENST00000393585 ALS2Q96Q42 1657 aa13.9□□□□□ -0.18
CASP3-202ENST00000393585 HAP1P54257 671 aaPredicted RBP13.9□□□□□ -0.18
CASP3-202ENST00000393585 MED1Q15648 1581 aaPredicted RBP13.89□□□□□ -0.19
CASP3-202ENST00000393585 SLC4A2P04920 1241 aa13.89□□□□□ -0.19
CASP3-202ENST00000393585 IPO9Q96P70 1041 aaKnown RBP13.89□□□□□ -0.19
CASP3-202ENST00000393585 NCOA3Q9Y6Q9 1424 aa13.89□□□□□ -0.19
CASP3-202ENST00000393585 CABLES1Q8TDN4 633 aa13.89□□□□□ -0.19
CASP3-202ENST00000393585 STRCQ7RTU9 1775 aa13.88□□□□□ -0.19
CASP3-202ENST00000393585 RGS12O14924 1447 aa13.88□□□□□ -0.19
CASP3-202ENST00000393585 RGPD5Q99666 1765 aa13.88□□□□□ -0.19
CASP3-202ENST00000393585 LGR6Q9HBX8 967 aa13.88□□□□□ -0.19
CASP3-202ENST00000393585 NPHP3Q7Z494 1330 aa13.88□□□□□ -0.19
CASP3-202ENST00000393585 XIRP1Q702N8 1843 aaKnown RBP13.88□□□□□ -0.19
CASP3-202ENST00000393585 ERICH6Q7L0X2 663 aa13.87□□□□□ -0.19
CASP3-202ENST00000393585 NECTIN2Q92692 538 aa13.87□□□□□ -0.19
CASP3-202ENST00000393585 ZNF335Q9H4Z2 1342 aaPredicted RBP13.87□□□□□ -0.19
CASP3-202ENST00000393585 TAF7Q15545 349 aaPredicted RBP13.87□□□□□ -0.19
CASP3-202ENST00000393585 ZNF530Q6P9A1 599 aaPredicted RBP13.87□□□□□ -0.19
CASP3-202ENST00000393585 G2E3Q7L622 706 aa13.87□□□□□ -0.19
CASP3-202ENST00000393585 SMC5Q8IY18 1101 aa13.86□□□□□ -0.19
CASP3-202ENST00000393585 ERBB3P21860 1342 aa13.85□□□□□ -0.19
CASP3-202ENST00000393585 NOP58Q9Y2X3 529 aaKnown RBP13.85□□□□□ -0.19
CASP3-202ENST00000393585 PXDNQ92626 1479 aa13.85□□□□□ -0.19
CASP3-202ENST00000393585 CEMIPQ8WUJ3 1361 aa13.85□□□□□ -0.19
CASP3-202ENST00000393585 MPRIPQ6WCQ1 1025 aa13.85□□□□□ -0.19
CASP3-202ENST00000393585 CHMP4BQ9H444 224 aaKnown RBP13.85□□□□□ -0.19
CASP3-202ENST00000393585 PTPRCP08575 1304 aa13.84□□□□□ -0.19
CASP3-202ENST00000393585 NPM3O75607 178 aaKnown RBP13.84□□□□□ -0.19
CASP3-202ENST00000393585 PLEKHO1Q53GL0 409 aaPredicted RBP13.84□□□□□ -0.19
CASP3-202ENST00000393585 INTS3Q68E01 1043 aaKnown RBP13.84□□□□□ -0.19
CASP3-202ENST00000393585 ANP32EQ9BTT0 268 aa13.84□□□□□ -0.19
CASP3-202ENST00000393585 TNS3Q68CZ2 1445 aa13.84□□□□□ -0.19
CASP3-202ENST00000393585 F6X3S4 739 aa13.84□□□□□ -0.19
CASP3-202ENST00000393585 CHRNA2Q15822 529 aa13.84□□□□□ -0.19
CASP3-202ENST00000393585 BRINP3Q76B58 766 aa13.84□□□□□ -0.19
CASP3-202ENST00000393585 SIRT2Q8IXJ6 389 aa13.84□□□□□ -0.19
CASP3-202ENST00000393585 NCAPD2Q15021 1401 aa13.84□□□□□ -0.19
CASP3-202ENST00000393585 AKAP4Q5JQC9 854 aa13.83□□□□□ -0.19
CASP3-202ENST00000393585 STK31Q9BXU1 1019 aa13.83□□□□□ -0.19
CASP3-202ENST00000393585 VIRMAQ69YN4 1812 aaKnown RBP13.83□□□□□ -0.2
CASP3-202ENST00000393585 SEC24BO95487 1268 aa13.82□□□□□ -0.2
CASP3-202ENST00000393585 AMOTQ4VCS5 1084 aa13.82□□□□□ -0.2
CASP3-202ENST00000393585 SLC4A10Q6U841 1118 aa13.82□□□□□ -0.2
CASP3-202ENST00000393585 LNPKQ9C0E8 428 aa13.82□□□□□ -0.2
CASP3-202ENST00000393585 ZBTB47Q9UFB7 747 aaPredicted RBP13.82□□□□□ -0.2
CASP3-202ENST00000393585 SPATA31A3Q5VYP0 1347 aa13.82□□□□□ -0.2
CASP3-202ENST00000393585 NLRP2Q9NX02 1062 aa13.82□□□□□ -0.2
CASP3-202ENST00000393585 LMO7Q8WWI1 1683 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms