RNA–Protein interactions for RNA: ENST00000393405.6

SNX11-202, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX11, Length 2,733 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-202ENST00000393405 TMEM2Q9UHN6 1383 aa18.94■□□□□ 0.62
SNX11-202ENST00000393405 UBR1Q8IWV7 1749 aa18.94■□□□□ 0.62
SNX11-202ENST00000393405 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.94■□□□□ 0.62
SNX11-202ENST00000393405 HSP90AB1P08238 724 aaKnown RBP18.94■□□□□ 0.62
SNX11-202ENST00000393405 TTC21BQ7Z4L5 1316 aa18.93■□□□□ 0.62
SNX11-202ENST00000393405 ADAMTS13Q76LX8 1427 aa18.93■□□□□ 0.62
SNX11-202ENST00000393405 HDGFP51858 240 aaKnown RBP18.93■□□□□ 0.62
SNX11-202ENST00000393405 API5Q9BZZ5 524 aaKnown RBP18.93■□□□□ 0.62
SNX11-202ENST00000393405 ACEP12821 1306 aa18.92■□□□□ 0.62
SNX11-202ENST00000393405 TPM2P07951 284 aa18.92■□□□□ 0.62
SNX11-202ENST00000393405 PDCL3Q9H2J4 239 aa18.92■□□□□ 0.62
SNX11-202ENST00000393405 IBTKQ9P2D0 1353 aaPredicted RBP18.92■□□□□ 0.62
SNX11-202ENST00000393405 CLEC17AQ6ZS10 378 aa18.91■□□□□ 0.62
SNX11-202ENST00000393405 GAS2L3Q86XJ1 694 aa18.91■□□□□ 0.62
SNX11-202ENST00000393405 OVOS2A0A0J9YW53 1432 aa18.91■□□□□ 0.62
SNX11-202ENST00000393405 OVOS2Q6IE36 1432 aa18.91■□□□□ 0.62
SNX11-202ENST00000393405 PEAK1Q9H792 1746 aa18.9■□□□□ 0.62
SNX11-202ENST00000393405 MCM10Q7L590 875 aa18.9■□□□□ 0.62
SNX11-202ENST00000393405 HSP90AB2PQ58FF8 381 aa18.9■□□□□ 0.62
SNX11-202ENST00000393405 TBC1D9Q6ZT07 1266 aa18.9■□□□□ 0.62
SNX11-202ENST00000393405 TOPAZ1Q8N9V7 1692 aa18.9■□□□□ 0.62
SNX11-202ENST00000393405 KIAA1211Q6ZU35 1233 aa18.89■□□□□ 0.62
SNX11-202ENST00000393405 KIF2CQ99661 725 aa18.89■□□□□ 0.62
SNX11-202ENST00000393405 CCDC173Q0VFZ6 552 aa18.89■□□□□ 0.61
SNX11-202ENST00000393405 SOX12O15370 315 aa18.88■□□□□ 0.61
SNX11-202ENST00000393405 LTKP29376 864 aa18.88■□□□□ 0.61
SNX11-202ENST00000393405 RGS12O14924 1447 aa18.88■□□□□ 0.61
SNX11-202ENST00000393405 PPP1R9BQ96SB3 815 aa18.88■□□□□ 0.61
SNX11-202ENST00000393405 K7ELQ4 463 aaPredicted RBP18.87■□□□□ 0.61
SNX11-202ENST00000393405 USP6P35125 1406 aa18.87■□□□□ 0.61
SNX11-202ENST00000393405 CHL1O00533 1208 aa18.87■□□□□ 0.61
SNX11-202ENST00000393405 NALCNQ8IZF0 1738 aa18.87■□□□□ 0.61
SNX11-202ENST00000393405 PRDM4Q9UKN5 801 aa18.87■□□□□ 0.61
SNX11-202ENST00000393405 GOLGA6L22H0YM25 854 aa18.86■□□□□ 0.61
SNX11-202ENST00000393405 RBM10P98175 930 aaKnown RBP18.86■□□□□ 0.61
SNX11-202ENST00000393405 INTS3Q68E01 1043 aaKnown RBP18.86■□□□□ 0.61
SNX11-202ENST00000393405 RGPD1P0DJD0 1748 aa18.86■□□□□ 0.61
SNX11-202ENST00000393405 PLEKHG3A1L390 1219 aa18.86■□□□□ 0.61
SNX11-202ENST00000393405 CD2BP2O95400 341 aaKnown RBP18.86■□□□□ 0.61
SNX11-202ENST00000393405 GSPT1P15170 499 aaKnown RBP18.86■□□□□ 0.61
SNX11-202ENST00000393405 ATP10DQ9P241 1426 aa18.85■□□□□ 0.61
SNX11-202ENST00000393405 KIF24Q5T7B8 1368 aa18.85■□□□□ 0.61
SNX11-202ENST00000393405 SLC26A8Q96RN1 970 aa18.84■□□□□ 0.61
SNX11-202ENST00000393405 DCTPP1Q9H773 170 aa18.84■□□□□ 0.61
SNX11-202ENST00000393405 KLHL40Q2TBA0 621 aa18.84■□□□□ 0.61
SNX11-202ENST00000393405 PLEKHM2Q8IWE5 1019 aa18.84■□□□□ 0.61
SNX11-202ENST00000393405 RBM42Q9BTD8 480 aaKnown RBP18.84■□□□□ 0.61
SNX11-202ENST00000393405 PTPRUQ92729 1446 aa18.83■□□□□ 0.61
SNX11-202ENST00000393405 MSH6P52701 1360 aa18.83■□□□□ 0.6
SNX11-202ENST00000393405 RIMS1Q86UR5 1692 aaKnown RBP18.83■□□□□ 0.6
SNX11-202ENST00000393405 PLEKHG1Q9ULL1 1385 aa18.83■□□□□ 0.6
SNX11-202ENST00000393405 C16orf71Q8IYS4 520 aaPredicted RBP18.82■□□□□ 0.6
SNX11-202ENST00000393405 USP31Q70CQ4 1352 aa18.82■□□□□ 0.6
SNX11-202ENST00000393405 FOXO3O43524 673 aa18.82■□□□□ 0.6
SNX11-202ENST00000393405 CDC45O75419 566 aa18.82■□□□□ 0.6
SNX11-202ENST00000393405 MIS18AQ9NYP9 233 aa18.82■□□□□ 0.6
SNX11-202ENST00000393405 KIAA0232Q92628 1395 aa18.82■□□□□ 0.6
SNX11-202ENST00000393405 A0A0U1RQG5 324 aaPredicted RBP18.81■□□□□ 0.6
SNX11-202ENST00000393405 NASPP49321 788 aaPredicted RBP18.81■□□□□ 0.6
SNX11-202ENST00000393405 ZSCAN30Q86W11 494 aa18.81■□□□□ 0.6
SNX11-202ENST00000393405 ANKRD44Q8N8A2 993 aa18.81■□□□□ 0.6
SNX11-202ENST00000393405 ANP32BQ92688 251 aaKnown RBP18.81■□□□□ 0.6
SNX11-202ENST00000393405 MAP3K19Q56UN5 1328 aa18.81■□□□□ 0.6
SNX11-202ENST00000393405 CRB1P82279 1406 aa18.81■□□□□ 0.6
SNX11-202ENST00000393405 SSH2Q76I76 1423 aa18.81■□□□□ 0.6
SNX11-202ENST00000393405 CEP85Q6P2H3 762 aa18.8■□□□□ 0.6
SNX11-202ENST00000393405 OTUD7AQ8TE49 926 aaPredicted RBP18.8■□□□□ 0.6
SNX11-202ENST00000393405 CEBPAP49715 358 aaPredicted RBP18.8■□□□□ 0.6
SNX11-202ENST00000393405 TERF1P54274 439 aa18.8■□□□□ 0.6
SNX11-202ENST00000393405 MEIS3Q99687 375 aa18.8■□□□□ 0.6
SNX11-202ENST00000393405 FMN2Q9NZ56 1722 aa18.8■□□□□ 0.6
SNX11-202ENST00000393405 RTL1A6NKG5 1358 aa18.79■□□□□ 0.6
SNX11-202ENST00000393405 HAP1P54257 671 aaPredicted RBP18.79■□□□□ 0.6
SNX11-202ENST00000393405 FOXD4L1Q9NU39 408 aa18.79■□□□□ 0.6
SNX11-202ENST00000393405 RGPD8O14715 1765 aaPredicted RBP18.78■□□□□ 0.6
SNX11-202ENST00000393405 SSFA2P28290 1259 aa18.78■□□□□ 0.6
SNX11-202ENST00000393405 ZNF445P59923 1031 aa18.78■□□□□ 0.6
SNX11-202ENST00000393405 MTHFSDQ2M296 383 aaKnown RBP18.78■□□□□ 0.6
SNX11-202ENST00000393405 HS1BP3Q53T59 392 aa18.78■□□□□ 0.6
SNX11-202ENST00000393405 TTC22Q5TAA0 569 aa18.78■□□□□ 0.6
SNX11-202ENST00000393405 BAG4O95429 457 aaKnown RBP18.78■□□□□ 0.6
SNX11-202ENST00000393405 SLC4A2P04920 1241 aa18.78■□□□□ 0.6
SNX11-202ENST00000393405 PTPRCP08575 1304 aa18.77■□□□□ 0.6
SNX11-202ENST00000393405 APBB1O00213 710 aa18.77■□□□□ 0.6
SNX11-202ENST00000393405 OFD1O75665 1012 aa18.77■□□□□ 0.6
SNX11-202ENST00000393405 RPAP2Q8IXW5 612 aaPredicted RBP18.77■□□□□ 0.6
SNX11-202ENST00000393405 GAS2L2Q8NHY3 880 aa18.77■□□□□ 0.6
SNX11-202ENST00000393405 SMARCA5O60264 1052 aaPredicted RBP18.77■□□□□ 0.59
SNX11-202ENST00000393405 ARID3AQ99856 593 aa18.77■□□□□ 0.59
SNX11-202ENST00000393405 ARHGEF10O15013 1369 aa18.76■□□□□ 0.59
SNX11-202ENST00000393405 G2E3Q7L622 706 aa18.76■□□□□ 0.59
SNX11-202ENST00000393405 FAM13BQ9NYF5 915 aa18.76■□□□□ 0.59
SNX11-202ENST00000393405 AMOTL2Q9Y2J4 779 aa18.76■□□□□ 0.59
SNX11-202ENST00000393405 DDX49Q9Y6V7 483 aaKnown RBP18.76■□□□□ 0.59
SNX11-202ENST00000393405 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.76■□□□□ 0.59
SNX11-202ENST00000393405 RABEP1Q15276 862 aa18.75■□□□□ 0.59
SNX11-202ENST00000393405 NUCB2P80303 420 aa18.75■□□□□ 0.59
SNX11-202ENST00000393405 F6X3S4 739 aa18.74■□□□□ 0.59
SNX11-202ENST00000393405 TSPYL4Q9UJ04 414 aa18.74■□□□□ 0.59
SNX11-202ENST00000393405 FLT4P35916 1363 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms