RNA–Protein interactions for RNA: ENST00000392789.2

SC5D-202, Transcript of sterol-C5-desaturase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SC5D, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SC5D-202ENST00000392789 NGDNQ8NEJ9 315 aaKnown RBP18.29■□□□□ 0.52
SC5D-202ENST00000392789 PIK3C2AO00443 1686 aa18.29■□□□□ 0.52
SC5D-202ENST00000392789 KDRP35968 1356 aa18.28■□□□□ 0.52
SC5D-202ENST00000392789 KRT24Q2M2I5 525 aa18.28■□□□□ 0.52
SC5D-202ENST00000392789 HSCBQ8IWL3 235 aa18.28■□□□□ 0.52
SC5D-202ENST00000392789 IL27Q8NEV9 243 aa18.28■□□□□ 0.52
SC5D-202ENST00000392789 ANKARQ7Z5J8 1434 aa18.27■□□□□ 0.52
SC5D-202ENST00000392789 RTF1Q92541 710 aaKnown RBP18.26■□□□□ 0.51
SC5D-202ENST00000392789 DCTPP1Q9H773 170 aa18.26■□□□□ 0.51
SC5D-202ENST00000392789 IGSF1Q8N6C5 1336 aa18.26■□□□□ 0.51
SC5D-202ENST00000392789 AMPHP49418 695 aa18.25■□□□□ 0.51
SC5D-202ENST00000392789 ATP10DQ9P241 1426 aa18.25■□□□□ 0.51
SC5D-202ENST00000392789 MTHFSDQ2M296 383 aaKnown RBP18.25■□□□□ 0.51
SC5D-202ENST00000392789 PLPPR3Q6T4P5 718 aa18.24■□□□□ 0.51
SC5D-202ENST00000392789 RPAP2Q8IXW5 612 aaPredicted RBP18.24■□□□□ 0.51
SC5D-202ENST00000392789 ANKRD44Q8N8A2 993 aa18.24■□□□□ 0.51
SC5D-202ENST00000392789 CHMP5Q9NZZ3 219 aa18.24■□□□□ 0.51
SC5D-202ENST00000392789 USP54Q70EL1 1684 aa18.24■□□□□ 0.51
SC5D-202ENST00000392789 GAS2L2Q8NHY3 880 aa18.24■□□□□ 0.51
SC5D-202ENST00000392789 SNX21Q969T3 373 aa18.24■□□□□ 0.51
SC5D-202ENST00000392789 MSH6P52701 1360 aa18.24■□□□□ 0.51
SC5D-202ENST00000392789 CEP170BQ9Y4F5 1589 aaPredicted RBP18.23■□□□□ 0.51
SC5D-202ENST00000392789 SPRYD3Q8NCJ5 442 aa18.23■□□□□ 0.51
SC5D-202ENST00000392789 TBC1D9Q6ZT07 1266 aa18.23■□□□□ 0.51
SC5D-202ENST00000392789 TSPYL4Q9UJ04 414 aa18.23■□□□□ 0.51
SC5D-202ENST00000392789 FOXO3O43524 673 aa18.22■□□□□ 0.51
SC5D-202ENST00000392789 EIF5BO60841 1220 aaKnown RBP18.22■□□□□ 0.51
SC5D-202ENST00000392789 EYA1Q99502 592 aa18.22■□□□□ 0.51
SC5D-202ENST00000392789 NCOA3Q9Y6Q9 1424 aa18.22■□□□□ 0.51
SC5D-202ENST00000392789 RTL1A6NKG5 1358 aa18.21■□□□□ 0.51
SC5D-202ENST00000392789 CDC45O75419 566 aa18.21■□□□□ 0.51
SC5D-202ENST00000392789 LRRC37A3O60309 1634 aa18.21■□□□□ 0.51
SC5D-202ENST00000392789 MARF1Q9Y4F3 1742 aaKnown RBP18.21■□□□□ 0.51
SC5D-202ENST00000392789 SLC4A2P04920 1241 aa18.21■□□□□ 0.51
SC5D-202ENST00000392789 CEP85Q6P2H3 762 aa18.21■□□□□ 0.51
SC5D-202ENST00000392789 HTATSF1O43719 755 aaKnown RBP18.2■□□□□ 0.5
SC5D-202ENST00000392789 NLRP6P59044 892 aa18.2■□□□□ 0.5
SC5D-202ENST00000392789 PLEKHM2Q8IWE5 1019 aa18.2■□□□□ 0.5
SC5D-202ENST00000392789 MIS18AQ9NYP9 233 aa18.19■□□□□ 0.5
SC5D-202ENST00000392789 GSPT1P15170 499 aaKnown RBP18.18■□□□□ 0.5
SC5D-202ENST00000392789 KCNA6P17658 529 aa18.18■□□□□ 0.5
SC5D-202ENST00000392789 TTC22Q5TAA0 569 aa18.18■□□□□ 0.5
SC5D-202ENST00000392789 MEIS3Q99687 375 aa18.18■□□□□ 0.5
SC5D-202ENST00000392789 HOXC9P31274 260 aa18.17■□□□□ 0.5
SC5D-202ENST00000392789 MCM4P33991 863 aa18.17■□□□□ 0.5
SC5D-202ENST00000392789 KIF2CQ99661 725 aa18.17■□□□□ 0.5
SC5D-202ENST00000392789 CCT4P50991 539 aaKnown RBP18.16■□□□□ 0.5
SC5D-202ENST00000392789 NWD1Q149M9 1564 aa18.16■□□□□ 0.5
SC5D-202ENST00000392789 FAM208AQ9UK61 1670 aaKnown RBP18.16■□□□□ 0.5
SC5D-202ENST00000392789 GNAT3A8MTJ3 354 aa18.15■□□□□ 0.5
SC5D-202ENST00000392789 HMMRO75330 724 aa18.15■□□□□ 0.5
SC5D-202ENST00000392789 HSP90AB1P08238 724 aaKnown RBP18.15■□□□□ 0.5
SC5D-202ENST00000392789 DDIT3P35638 169 aa18.15■□□□□ 0.5
SC5D-202ENST00000392789 STK31Q9BXU1 1019 aa18.15■□□□□ 0.5
SC5D-202ENST00000392789 G2E3Q7L622 706 aa18.14■□□□□ 0.49
SC5D-202ENST00000392789 ABTB2Q8N961 1025 aa18.14■□□□□ 0.49
SC5D-202ENST00000392789 ANO8Q9HCE9 1232 aaPredicted RBP18.14■□□□□ 0.49
SC5D-202ENST00000392789 BRPF3Q9ULD4 1205 aa18.14■□□□□ 0.49
SC5D-202ENST00000392789 MAP3K5Q99683 1374 aa18.13■□□□□ 0.49
SC5D-202ENST00000392789 SOS1Q07889 1333 aaPredicted RBP18.13■□□□□ 0.49
SC5D-202ENST00000392789 CIZ1Q9ULV3 898 aaPredicted RBP18.13■□□□□ 0.49
SC5D-202ENST00000392789 NUTM2GQ5VZR2 741 aa18.12■□□□□ 0.49
SC5D-202ENST00000392789 SLC4A10Q6U841 1118 aa18.12■□□□□ 0.49
SC5D-202ENST00000392789 C16orf71Q8IYS4 520 aaPredicted RBP18.12■□□□□ 0.49
SC5D-202ENST00000392789 CCDC30Q5VVM6 783 aa18.11■□□□□ 0.49
SC5D-202ENST00000392789 BABAM1Q9NWV8 329 aa18.11■□□□□ 0.49
SC5D-202ENST00000392789 F6X3S4 739 aa18.11■□□□□ 0.49
SC5D-202ENST00000392789 CHD2O14647 1828 aaKnown RBP18.1■□□□□ 0.49
SC5D-202ENST00000392789 CACNA1FO60840 1977 aa18.1■□□□□ 0.49
SC5D-202ENST00000392789 LTN1O94822 1766 aa18.1■□□□□ 0.49
SC5D-202ENST00000392789 K7ELQ4 463 aaPredicted RBP18.1■□□□□ 0.49
SC5D-202ENST00000392789 CASC1Q6TDU7 716 aa18.1■□□□□ 0.49
SC5D-202ENST00000392789 DDX11L8A8MPP1 907 aa18.1■□□□□ 0.49
SC5D-202ENST00000392789 OTUD7AQ8TE49 926 aaPredicted RBP18.1■□□□□ 0.49
SC5D-202ENST00000392789 N4BP2Q86UW6 1770 aaPredicted RBP18.09■□□□□ 0.49
SC5D-202ENST00000392789 SMARCA5O60264 1052 aaPredicted RBP18.09■□□□□ 0.49
SC5D-202ENST00000392789 GNAI2P04899 355 aa18.09■□□□□ 0.49
SC5D-202ENST00000392789 FLIIQ13045 1269 aa18.09■□□□□ 0.49
SC5D-202ENST00000392789 APBB1O00213 710 aa18.09■□□□□ 0.49
SC5D-202ENST00000392789 L1TD1Q5T7N2 865 aaKnown RBP18.09■□□□□ 0.49
SC5D-202ENST00000392789 PHF8Q9UPP1 1060 aa18.09■□□□□ 0.49
SC5D-202ENST00000392789 HSP90AA1P07900 732 aaKnown RBP18.08■□□□□ 0.48
SC5D-202ENST00000392789 RTN4Q9NQC3 1192 aaKnown RBP18.08■□□□□ 0.48
SC5D-202ENST00000392789 CD2BP2O95400 341 aaKnown RBP18.07■□□□□ 0.48
SC5D-202ENST00000392789 SDSP20132 328 aa18.07■□□□□ 0.48
SC5D-202ENST00000392789 TAF7Q15545 349 aaPredicted RBP18.07■□□□□ 0.48
SC5D-202ENST00000392789 IL17REQ8NFR9 667 aa18.07■□□□□ 0.48
SC5D-202ENST00000392789 LTV1Q96GA3 475 aaPredicted RBP18.07■□□□□ 0.48
SC5D-202ENST00000392789 PXDNLA1KZ92 1463 aa18.07■□□□□ 0.48
SC5D-202ENST00000392789 GNAI3P08754 354 aa18.07■□□□□ 0.48
SC5D-202ENST00000392789 FKBP5Q13451 457 aaPredicted RBP18.07■□□□□ 0.48
SC5D-202ENST00000392789 RABEP1Q15276 862 aa18.07■□□□□ 0.48
SC5D-202ENST00000392789 C14orf37Q86TY3 774 aa18.07■□□□□ 0.48
SC5D-202ENST00000392789 RBM42Q9BTD8 480 aaKnown RBP18.06■□□□□ 0.48
SC5D-202ENST00000392789 ZNF142P52746 1687 aaPredicted RBP18.06■□□□□ 0.48
SC5D-202ENST00000392789 USP26Q9BXU7 913 aa18.06■□□□□ 0.48
SC5D-202ENST00000392789 OSBPL3Q9H4L5 887 aa18.06■□□□□ 0.48
SC5D-202ENST00000392789 NFAT5O94916 1531 aa18.05■□□□□ 0.48
SC5D-202ENST00000392789 TRAK2O60296 914 aa18.05■□□□□ 0.48
SC5D-202ENST00000392789 RAB3GAP1Q15042 981 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms