RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 FOXO3O43524 673 aa25.89■■□□□ 1.73
COL23A1-201ENST00000390654 EIF4A2Q14240 407 aaKnown RBP25.89■■□□□ 1.73
COL23A1-201ENST00000390654 PRR36Q9H6K5 1346 aa25.88■■□□□ 1.73
COL23A1-201ENST00000390654 ANKRD26Q9UPS8 1709 aa25.88■■□□□ 1.73
COL23A1-201ENST00000390654 NUTM2GQ5VZR2 741 aa25.88■■□□□ 1.73
COL23A1-201ENST00000390654 A2ML1A8K2U0 1454 aa25.87■■□□□ 1.73
COL23A1-201ENST00000390654 NASPP49321 788 aaPredicted RBP25.87■■□□□ 1.73
COL23A1-201ENST00000390654 CEBPAP49715 358 aaPredicted RBP25.87■■□□□ 1.73
COL23A1-201ENST00000390654 MSH6P52701 1360 aa25.87■■□□□ 1.73
COL23A1-201ENST00000390654 ANKRD44Q8N8A2 993 aa25.87■■□□□ 1.73
COL23A1-201ENST00000390654 RABEP1Q15276 862 aa25.86■■□□□ 1.73
COL23A1-201ENST00000390654 INTS3Q68E01 1043 aaKnown RBP25.86■■□□□ 1.73
COL23A1-201ENST00000390654 G2E3Q7L622 706 aa25.86■■□□□ 1.73
COL23A1-201ENST00000390654 KIF20BQ96Q89 1820 aa25.86■■□□□ 1.73
COL23A1-201ENST00000390654 RBM27Q9P2N5 1060 aaKnown RBP25.85■■□□□ 1.73
COL23A1-201ENST00000390654 FOXD4L6Q3SYB3 417 aaPredicted RBP25.85■■□□□ 1.73
COL23A1-201ENST00000390654 FOXD4L3Q6VB84 417 aaPredicted RBP25.85■■□□□ 1.73
COL23A1-201ENST00000390654 PRPF40AO75400 957 aaKnown RBP25.84■■□□□ 1.73
COL23A1-201ENST00000390654 EXOC6BQ9Y2D4 811 aa25.84■■□□□ 1.73
COL23A1-201ENST00000390654 CPS1P31327 1500 aa25.84■■□□□ 1.73
COL23A1-201ENST00000390654 TPRNQ4KMQ1 711 aa25.83■■□□□ 1.73
COL23A1-201ENST00000390654 EDC4Q6P2E9 1401 aaKnown RBP25.82■■□□□ 1.72
COL23A1-201ENST00000390654 ACEP12821 1306 aa25.81■■□□□ 1.72
COL23A1-201ENST00000390654 KLHL40Q2TBA0 621 aa25.8■■□□□ 1.72
COL23A1-201ENST00000390654 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.8■■□□□ 1.72
COL23A1-201ENST00000390654 KNDC1Q76NI1 1749 aa25.8■■□□□ 1.72
COL23A1-201ENST00000390654 ATP7BP35670 1465 aa25.8■■□□□ 1.72
COL23A1-201ENST00000390654 CLTCQ00610 1675 aaKnown RBP25.8■■□□□ 1.72
COL23A1-201ENST00000390654 CASC1Q6TDU7 716 aa25.79■■□□□ 1.72
COL23A1-201ENST00000390654 UBE2Q2Q8WVN8 375 aa25.79■■□□□ 1.72
COL23A1-201ENST00000390654 CDC42BPGQ6DT37 1551 aa25.79■■□□□ 1.72
COL23A1-201ENST00000390654 RTL1A6NKG5 1358 aa25.79■■□□□ 1.72
COL23A1-201ENST00000390654 RPAP2Q8IXW5 612 aaPredicted RBP25.79■■□□□ 1.72
COL23A1-201ENST00000390654 LTV1Q96GA3 475 aaPredicted RBP25.79■■□□□ 1.72
COL23A1-201ENST00000390654 ISY1Q9ULR0 285 aaKnown RBP25.79■■□□□ 1.72
COL23A1-201ENST00000390654 CPSF1Q10570 1443 aaKnown RBP25.78■■□□□ 1.72
COL23A1-201ENST00000390654 ATP10DQ9P241 1426 aa25.78■■□□□ 1.72
COL23A1-201ENST00000390654 CHL1O00533 1208 aa25.78■■□□□ 1.72
COL23A1-201ENST00000390654 ANP32BQ92688 251 aaKnown RBP25.78■■□□□ 1.72
COL23A1-201ENST00000390654 ST18O60284 1047 aa25.77■■□□□ 1.72
COL23A1-201ENST00000390654 NEK4P51957 841 aa25.77■■□□□ 1.72
COL23A1-201ENST00000390654 LMBRD1Q9NUN5 540 aa25.77■■□□□ 1.72
COL23A1-201ENST00000390654 ZSCAN23Q3MJ62 389 aa25.76■■□□□ 1.71
COL23A1-201ENST00000390654 TSPYL4Q9UJ04 414 aa25.76■■□□□ 1.71
COL23A1-201ENST00000390654 DLG5Q8TDM6 1919 aa25.76■■□□□ 1.71
COL23A1-201ENST00000390654 CDK12Q9NYV4 1490 aaPredicted RBP25.76■■□□□ 1.71
COL23A1-201ENST00000390654 NUCB2P80303 420 aa25.75■■□□□ 1.71
COL23A1-201ENST00000390654 RILPL2Q969X0 211 aa25.75■■□□□ 1.71
COL23A1-201ENST00000390654 C14orf37Q86TY3 774 aa25.75■■□□□ 1.71
COL23A1-201ENST00000390654 ROBO2Q9HCK4 1378 aa25.75■■□□□ 1.71
COL23A1-201ENST00000390654 TTC21BQ7Z4L5 1316 aa25.75■■□□□ 1.71
COL23A1-201ENST00000390654 NSFL1CQ9UNZ2 370 aaKnown RBP25.74■■□□□ 1.71
COL23A1-201ENST00000390654 ZBTB7CA1YPR0 619 aa25.74■■□□□ 1.71
COL23A1-201ENST00000390654 PRIM1P49642 420 aaKnown RBP25.74■■□□□ 1.71
COL23A1-201ENST00000390654 ZDHHC9Q9Y397 364 aa25.74■■□□□ 1.71
COL23A1-201ENST00000390654 RGS12O14924 1447 aa25.74■■□□□ 1.71
COL23A1-201ENST00000390654 PTMSP20962 102 aa25.73■■□□□ 1.71
COL23A1-201ENST00000390654 LTKP29376 864 aa25.73■■□□□ 1.71
COL23A1-201ENST00000390654 RBSNQ9H1K0 784 aa25.73■■□□□ 1.71
COL23A1-201ENST00000390654 TRIM6-TRIM34B2RNG4 842 aa25.73■■□□□ 1.71
COL23A1-201ENST00000390654 ERC2O15083 957 aa25.72■■□□□ 1.71
COL23A1-201ENST00000390654 GPT2Q8TD30 523 aa25.72■■□□□ 1.71
COL23A1-201ENST00000390654 RBM33Q96EV2 1170 aaKnown RBP25.72■■□□□ 1.71
COL23A1-201ENST00000390654 AATKQ6ZMQ8 1374 aa25.72■■□□□ 1.71
COL23A1-201ENST00000390654 PDE1AP54750 535 aa25.72■■□□□ 1.71
COL23A1-201ENST00000390654 REC8O95072 547 aa25.71■■□□□ 1.71
COL23A1-201ENST00000390654 CCDC173Q0VFZ6 552 aa25.71■■□□□ 1.71
COL23A1-201ENST00000390654 MTHFSDQ2M296 383 aaKnown RBP25.71■■□□□ 1.71
COL23A1-201ENST00000390654 RNF214Q8ND24 703 aa25.71■■□□□ 1.71
COL23A1-201ENST00000390654 NGDNQ8NEJ9 315 aaKnown RBP25.71■■□□□ 1.71
COL23A1-201ENST00000390654 RTF1Q92541 710 aaKnown RBP25.71■■□□□ 1.71
COL23A1-201ENST00000390654 HSP90AA2PQ14568 343 aaPredicted RBP25.7■■□□□ 1.71
COL23A1-201ENST00000390654 PALD1Q9ULE6 856 aa25.7■■□□□ 1.7
COL23A1-201ENST00000390654 ANO2Q9NQ90 1003 aa25.69■■□□□ 1.7
COL23A1-201ENST00000390654 SYCE3A1L190 88 aa25.69■■□□□ 1.7
COL23A1-201ENST00000390654 UPF3BQ9BZI7 483 aaKnown RBP25.69■■□□□ 1.7
COL23A1-201ENST00000390654 DTNBO60941 627 aa25.69■■□□□ 1.7
COL23A1-201ENST00000390654 CYP2E1P05181 493 aaPredicted RBP25.69■■□□□ 1.7
COL23A1-201ENST00000390654 AMPHP49418 695 aa25.69■■□□□ 1.7
COL23A1-201ENST00000390654 FKBP5Q13451 457 aaPredicted RBP25.68■■□□□ 1.7
COL23A1-201ENST00000390654 MAP3K19Q56UN5 1328 aa25.68■■□□□ 1.7
COL23A1-201ENST00000390654 HMMRO75330 724 aa25.68■■□□□ 1.7
COL23A1-201ENST00000390654 MAP4K4O95819 1239 aaPredicted RBP25.68■■□□□ 1.7
COL23A1-201ENST00000390654 PNMA6EA0A0J9YXQ4 647 aa25.67■■□□□ 1.7
COL23A1-201ENST00000390654 MSNP26038 577 aaKnown RBP25.67■■□□□ 1.7
COL23A1-201ENST00000390654 CLEC17AQ6ZS10 378 aa25.67■■□□□ 1.7
COL23A1-201ENST00000390654 TMX3Q96JJ7 454 aa25.67■■□□□ 1.7
COL23A1-201ENST00000390654 GDPD2Q9HCC8 539 aa25.67■■□□□ 1.7
COL23A1-201ENST00000390654 IL1RAPL2Q9NP60 686 aa25.66■■□□□ 1.7
COL23A1-201ENST00000390654 HDGFP51858 240 aaKnown RBP25.66■■□□□ 1.7
COL23A1-201ENST00000390654 TMEM63CQ9P1W3 806 aa25.66■■□□□ 1.7
COL23A1-201ENST00000390654 PTPRCP08575 1304 aa25.65■■□□□ 1.7
COL23A1-201ENST00000390654 KIAA1211Q6ZU35 1233 aa25.65■■□□□ 1.7
COL23A1-201ENST00000390654 MPNDQ8N594 471 aa25.65■■□□□ 1.7
COL23A1-201ENST00000390654 LARP6Q9BRS8 491 aaKnown RBP25.65■■□□□ 1.7
COL23A1-201ENST00000390654 ZSCAN30Q86W11 494 aa25.64■■□□□ 1.7
COL23A1-201ENST00000390654 HAP1P54257 671 aaPredicted RBP25.64■■□□□ 1.69
COL23A1-201ENST00000390654 UNC5CLQ8IV45 518 aa25.64■■□□□ 1.69
COL23A1-201ENST00000390654 USHBP1Q8N6Y0 703 aa25.64■■□□□ 1.69
COL23A1-201ENST00000390654 PPP1R9BQ96SB3 815 aa25.64■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms