RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 BCAR3O75815 825 aa17.61■□□□□ 0.41
LRRK1-201ENST00000388948 CADPS2Q86UW7 1296 aa17.61■□□□□ 0.41
LRRK1-201ENST00000388948 AKAP2Q9Y2D5 859 aa17.6■□□□□ 0.41
LRRK1-201ENST00000388948 MINDY4BA8MYZ0 360 aa17.6■□□□□ 0.41
LRRK1-201ENST00000388948 ANKRD1Q15327 319 aa17.6■□□□□ 0.41
LRRK1-201ENST00000388948 HSP90AB3PQ58FF7 597 aa17.6■□□□□ 0.41
LRRK1-201ENST00000388948 PPM1FP49593 454 aaPredicted RBP17.6■□□□□ 0.41
LRRK1-201ENST00000388948 SMARCE1Q969G3 411 aa17.6■□□□□ 0.41
LRRK1-201ENST00000388948 MYO6Q9UM54 1294 aa17.6■□□□□ 0.41
LRRK1-201ENST00000388948 MYD88Q99836 296 aa17.59■□□□□ 0.41
LRRK1-201ENST00000388948 SEC63Q9UGP8 760 aaKnown RBP17.59■□□□□ 0.41
LRRK1-201ENST00000388948 SMC2O95347 1197 aa17.59■□□□□ 0.41
LRRK1-201ENST00000388948 NEBLO76041 1014 aa17.59■□□□□ 0.41
LRRK1-201ENST00000388948 PIP4K2AP48426 406 aaPredicted RBP17.59■□□□□ 0.41
LRRK1-201ENST00000388948 CDCA7LQ96GN5 454 aa17.59■□□□□ 0.41
LRRK1-201ENST00000388948 C8orf37Q96NL8 207 aa17.59■□□□□ 0.41
LRRK1-201ENST00000388948 POLA1P09884 1462 aaPredicted RBP17.59■□□□□ 0.41
LRRK1-201ENST00000388948 IFIT5Q13325 482 aaKnown RBP17.59■□□□□ 0.41
LRRK1-201ENST00000388948 FBXO31Q5XUX0 539 aaPredicted RBP17.59■□□□□ 0.41
LRRK1-201ENST00000388948 C16orf71Q8IYS4 520 aaPredicted RBP17.59■□□□□ 0.41
LRRK1-201ENST00000388948 CDKL5O76039 1030 aa17.58■□□□□ 0.41
LRRK1-201ENST00000388948 LARP1Q6PKG0 1096 aaKnown RBP17.58■□□□□ 0.41
LRRK1-201ENST00000388948 MNS1Q8NEH6 495 aa17.58■□□□□ 0.41
LRRK1-201ENST00000388948 MCM10Q7L590 875 aa17.58■□□□□ 0.4
LRRK1-201ENST00000388948 MSH6P52701 1360 aa17.58■□□□□ 0.4
LRRK1-201ENST00000388948 FCHSD2O94868 740 aa17.58■□□□□ 0.4
LRRK1-201ENST00000388948 GPTP24298 496 aa17.58■□□□□ 0.4
LRRK1-201ENST00000388948 IL1RAPL2Q9NP60 686 aa17.58■□□□□ 0.4
LRRK1-201ENST00000388948 CLEC11AQ9Y240 323 aa17.57■□□□□ 0.4
LRRK1-201ENST00000388948 DESP17661 470 aa17.57■□□□□ 0.4
LRRK1-201ENST00000388948 MCM2P49736 904 aa17.57■□□□□ 0.4
LRRK1-201ENST00000388948 FEZ1Q99689 392 aa17.57■□□□□ 0.4
LRRK1-201ENST00000388948 ADGRL1O94910 1474 aa17.57■□□□□ 0.4
LRRK1-201ENST00000388948 SLF2Q8IX21 1173 aa17.57■□□□□ 0.4
LRRK1-201ENST00000388948 EFCAB5A4FU69 1503 aa17.57■□□□□ 0.4
LRRK1-201ENST00000388948 PPP4R3AQ6IN85 833 aa17.57■□□□□ 0.4
LRRK1-201ENST00000388948 CCDC96Q2M329 555 aa17.56■□□□□ 0.4
LRRK1-201ENST00000388948 CWC27Q6UX04 472 aaKnown RBP17.56■□□□□ 0.4
LRRK1-201ENST00000388948 VSIG10Q8N0Z9 540 aa17.56■□□□□ 0.4
LRRK1-201ENST00000388948 ZNHIT6Q9NWK9 470 aaKnown RBP17.56■□□□□ 0.4
LRRK1-201ENST00000388948 SEPT11Q9NVA2 429 aaKnown RBP17.55■□□□□ 0.4
LRRK1-201ENST00000388948 FIBPO43427 364 aa17.55■□□□□ 0.4
LRRK1-201ENST00000388948 ME1P48163 572 aa17.55■□□□□ 0.4
LRRK1-201ENST00000388948 NFE2L2Q16236 605 aa17.55■□□□□ 0.4
LRRK1-201ENST00000388948 IMMTQ16891 758 aaKnown RBP17.55■□□□□ 0.4
LRRK1-201ENST00000388948 SUPT6HQ7KZ85 1726 aaKnown RBP17.55■□□□□ 0.4
LRRK1-201ENST00000388948 ARHGEF11O15085 1522 aa17.55■□□□□ 0.4
LRRK1-201ENST00000388948 DDX46Q7L014 1031 aaKnown RBP17.55■□□□□ 0.4
LRRK1-201ENST00000388948 ST5P78524 1137 aa17.55■□□□□ 0.4
LRRK1-201ENST00000388948 DUSP27Q5VZP5 1158 aa17.55■□□□□ 0.4
LRRK1-201ENST00000388948 BLOC1S2Q6QNY1 142 aa17.55■□□□□ 0.4
LRRK1-201ENST00000388948 ZNF444Q8N0Y2 327 aaPredicted RBP17.55■□□□□ 0.4
LRRK1-201ENST00000388948 SLC5A1P13866 664 aa17.54■□□□□ 0.4
LRRK1-201ENST00000388948 TAF7Q15545 349 aaPredicted RBP17.54■□□□□ 0.4
LRRK1-201ENST00000388948 FAM13BQ9NYF5 915 aa17.54■□□□□ 0.4
LRRK1-201ENST00000388948 NSD3Q9BZ95 1437 aa17.54■□□□□ 0.4
LRRK1-201ENST00000388948 DEF6Q9H4E7 631 aa17.54■□□□□ 0.4
LRRK1-201ENST00000388948 SKIDA1Q1XH10 827 aa17.54■□□□□ 0.4
LRRK1-201ENST00000388948 ATF7IPQ6VMQ6 1270 aa17.54■□□□□ 0.4
LRRK1-201ENST00000388948 PDZRN3Q9UPQ7 1066 aa17.54■□□□□ 0.4
LRRK1-201ENST00000388948 MYO1BO43795 1136 aa17.53■□□□□ 0.4
LRRK1-201ENST00000388948 AKNAQ7Z591 1439 aa17.53■□□□□ 0.4
LRRK1-201ENST00000388948 CHRNA2Q15822 529 aa17.53■□□□□ 0.4
LRRK1-201ENST00000388948 WDR63Q8IWG1 891 aa17.53■□□□□ 0.4
LRRK1-201ENST00000388948 TRIM5Q9C035 493 aa17.53■□□□□ 0.4
LRRK1-201ENST00000388948 ANKRD18BA2A2Z9 1011 aa17.52■□□□□ 0.4
LRRK1-201ENST00000388948 DNAI2Q9GZS0 605 aa17.52■□□□□ 0.4
LRRK1-201ENST00000388948 NEFHP12036 1026 aa17.52■□□□□ 0.4
LRRK1-201ENST00000388948 MAP3K12Q12852 859 aa17.52■□□□□ 0.4
LRRK1-201ENST00000388948 NME9Q86XW9 330 aa17.52■□□□□ 0.4
LRRK1-201ENST00000388948 NAPBQ9H115 298 aa17.52■□□□□ 0.4
LRRK1-201ENST00000388948 DCTN1Q14203 1278 aa17.52■□□□□ 0.39
LRRK1-201ENST00000388948 CCDC97Q96F63 343 aaPredicted RBP17.52■□□□□ 0.39
LRRK1-201ENST00000388948 LUC7LQ9NQ29 371 aaKnown RBP17.52■□□□□ 0.39
LRRK1-201ENST00000388948 CUL5Q93034 780 aa17.51■□□□□ 0.39
LRRK1-201ENST00000388948 ZBTB3Q9H5J0 574 aa17.51■□□□□ 0.39
LRRK1-201ENST00000388948 RABEP1Q15276 862 aa17.5■□□□□ 0.39
LRRK1-201ENST00000388948 ACSBG1Q96GR2 724 aa17.5■□□□□ 0.39
LRRK1-201ENST00000388948 ACBD3Q9H3P7 528 aa17.5■□□□□ 0.39
LRRK1-201ENST00000388948 RNF214Q8ND24 703 aa17.5■□□□□ 0.39
LRRK1-201ENST00000388948 WWC3Q9ULE0 1092 aa17.5■□□□□ 0.39
LRRK1-201ENST00000388948 WASF1Q92558 559 aa17.5■□□□□ 0.39
LRRK1-201ENST00000388948 DNMBPQ6XZF7 1577 aa17.5■□□□□ 0.39
LRRK1-201ENST00000388948 SERPINC1P01008 464 aa17.5■□□□□ 0.39
LRRK1-201ENST00000388948 CT47B1P0C2W7 299 aaPredicted RBP17.5■□□□□ 0.39
LRRK1-201ENST00000388948 CDC5LQ99459 802 aaKnown RBP17.5■□□□□ 0.39
LRRK1-201ENST00000388948 RANBP6O60518 1105 aaKnown RBP17.5■□□□□ 0.39
LRRK1-201ENST00000388948 NOM1Q5C9Z4 860 aaKnown RBP17.5■□□□□ 0.39
LRRK1-201ENST00000388948 THUMPD2Q9BTF0 503 aaKnown RBP17.5■□□□□ 0.39
LRRK1-201ENST00000388948 TSHZ2Q9NRE2 1034 aa17.49■□□□□ 0.39
LRRK1-201ENST00000388948 DACH1Q9UI36 760 aa17.49■□□□□ 0.39
LRRK1-201ENST00000388948 TEX13AQ9BXU3 409 aaPredicted RBP17.49■□□□□ 0.39
LRRK1-201ENST00000388948 DAPK1P53355 1430 aa17.49■□□□□ 0.39
LRRK1-201ENST00000388948 WASLO00401 505 aaPredicted RBP17.49■□□□□ 0.39
LRRK1-201ENST00000388948 NBPF6Q5VWK0 638 aa17.49■□□□□ 0.39
LRRK1-201ENST00000388948 NBPF5PQ86XG9 351 aaPredicted RBP17.49■□□□□ 0.39
LRRK1-201ENST00000388948 NBPF4Q96M43 638 aa17.49■□□□□ 0.39
LRRK1-201ENST00000388948 CDK13Q14004 1512 aaKnown RBP17.49■□□□□ 0.39
LRRK1-201ENST00000388948 JAKMIP1Q96N16 626 aaKnown RBP17.49■□□□□ 0.39
LRRK1-201ENST00000388948 POLD1P28340 1107 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms